RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 PRSS2P07478 247 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 PLNP26678 52 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 RNF151Q2KHN1 245 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 C2orf82Q6UX34 121 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 UNQ6190/PRO20217Q6UXQ8 127 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 Q6ZSA8 131 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 COX7B2Q8TF08 81 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 FAM30AQ9NZY2 134 aa9.7□□□□□ -0.86
MKS1-210ENST00000581180 S100A2P29034 98 aa9.69□□□□□ -0.86
MKS1-210ENST00000581180 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
MKS1-210ENST00000581180 C6orf48Q9UBA6 75 aa9.69□□□□□ -0.86
MKS1-210ENST00000581180 RYR1P21817 5038 aa9.68□□□□□ -0.86
MKS1-210ENST00000581180 IGKCP01834 107 aa9.68□□□□□ -0.86
MKS1-210ENST00000581180 CXCL5P42830 114 aa9.68□□□□□ -0.86
MKS1-210ENST00000581180 KRTDAPP60985 99 aa9.68□□□□□ -0.86
MKS1-210ENST00000581180 KIAA1109Q2LD37 5005 aa9.67□□□□□ -0.86
MKS1-210ENST00000581180 TRBV30A0A0K0K1B3 111 aa9.66□□□□□ -0.86
MKS1-210ENST00000581180 CKS1BP61024 79 aa9.66□□□□□ -0.86
MKS1-210ENST00000581180 PANO1I0J062 215 aa9.65□□□□□ -0.86
MKS1-210ENST00000581180 CDK2AP2O75956 126 aa9.65□□□□□ -0.86
MKS1-210ENST00000581180 XGP55808 180 aa9.65□□□□□ -0.86
MKS1-210ENST00000581180 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
MKS1-210ENST00000581180 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.65□□□□□ -0.86
MKS1-210ENST00000581180 HSPG2P98160 4391 aa9.65□□□□□ -0.87
MKS1-210ENST00000581180 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
MKS1-210ENST00000581180 TLX1NBP0CAT3 122 aa9.64□□□□□ -0.87
MKS1-210ENST00000581180 A0A096LNI7 61 aa9.63□□□□□ -0.87
MKS1-210ENST00000581180 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
MKS1-210ENST00000581180 C9orf116Q5BN46 136 aaPredicted RBP9.63□□□□□ -0.87
MKS1-210ENST00000581180 PKIGQ9Y2B9 76 aa9.63□□□□□ -0.87
MKS1-210ENST00000581180 SPACA4Q8TDM5 124 aa9.62□□□□□ -0.87
MKS1-210ENST00000581180 C20orf202A1L168 122 aa9.61□□□□□ -0.87
MKS1-210ENST00000581180 LEPROTO15243 131 aa9.61□□□□□ -0.87
MKS1-210ENST00000581180 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
MKS1-210ENST00000581180 HERVK_113P61574 105 aa9.61□□□□□ -0.87
MKS1-210ENST00000581180 ZNF625Q96I27 306 aaPredicted RBP9.61□□□□□ -0.87
MKS1-210ENST00000581180 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
MKS1-210ENST00000581180 TSPEAR-AS2P59090 65 aa9.6□□□□□ -0.87
MKS1-210ENST00000581180 HAMPP81172 84 aa9.6□□□□□ -0.87
MKS1-210ENST00000581180 Q6ZRP5 223 aa9.6□□□□□ -0.87
MKS1-210ENST00000581180 PLEKHB2Q96CS7 222 aa9.6□□□□□ -0.87
MKS1-210ENST00000581180 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
MKS1-210ENST00000581180 E9PLD3 99 aa9.59□□□□□ -0.87
MKS1-210ENST00000581180 NDUFC2-KCTD14E9PQ53 114 aa9.59□□□□□ -0.87
MKS1-210ENST00000581180 RPL18AQ02543 176 aaKnown RBP9.59□□□□□ -0.87
MKS1-210ENST00000581180 GAGE2BQ13066 116 aa9.59□□□□□ -0.87
MKS1-210ENST00000581180 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
MKS1-210ENST00000581180 SCXQ7RTU7 201 aa9.59□□□□□ -0.87
MKS1-210ENST00000581180 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
MKS1-210ENST00000581180 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
MKS1-210ENST00000581180 STPG4Q8N801 248 aa9.58□□□□□ -0.88
MKS1-210ENST00000581180 A0A087WYN8 130 aa9.57□□□□□ -0.88
MKS1-210ENST00000581180 J3QQQ9 107 aa9.57□□□□□ -0.88
MKS1-210ENST00000581180 AKR1D1P51857 326 aa9.57□□□□□ -0.88
MKS1-210ENST00000581180 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
MKS1-210ENST00000581180 GAGE2EQ4V326 116 aa9.56□□□□□ -0.88
MKS1-210ENST00000581180 ATOH7Q8N100 152 aa9.56□□□□□ -0.88
MKS1-210ENST00000581180 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
MKS1-210ENST00000581180 GAGE2DQ9UEU5 116 aa9.56□□□□□ -0.88
MKS1-210ENST00000581180 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
MKS1-210ENST00000581180 HERC2O95714 4834 aa9.56□□□□□ -0.88
MKS1-210ENST00000581180 FAT1Q14517 4588 aa9.55□□□□□ -0.88
MKS1-210ENST00000581180 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
MKS1-210ENST00000581180 ERG28Q9UKR5 140 aa9.55□□□□□ -0.88
MKS1-210ENST00000581180 IGKV2D-26A0A0A0MRZ7 120 aa9.54□□□□□ -0.88
MKS1-210ENST00000581180 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
MKS1-210ENST00000581180 LGALS3P17931 250 aaKnown RBP9.54□□□□□ -0.88
MKS1-210ENST00000581180 HERV-K104P63124 156 aa9.54□□□□□ -0.88
MKS1-210ENST00000581180 C9orf129Q5T035 196 aaKnown RBP9.54□□□□□ -0.88
MKS1-210ENST00000581180 KRTAP17-1Q9BYP8 105 aa9.54□□□□□ -0.88
MKS1-210ENST00000581180 NMUP48645 174 aa9.53□□□□□ -0.88
MKS1-210ENST00000581180 COX17Q14061 63 aa9.53□□□□□ -0.88
MKS1-210ENST00000581180 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
MKS1-210ENST00000581180 DPH3Q96FX2 82 aa9.53□□□□□ -0.88
MKS1-210ENST00000581180 A0A1W2PNN7 141 aa9.52□□□□□ -0.89
MKS1-210ENST00000581180 PFN2P35080 140 aa9.52□□□□□ -0.89
MKS1-210ENST00000581180 SCGB1D1O95968 90 aa9.51□□□□□ -0.89
MKS1-210ENST00000581180 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
MKS1-210ENST00000581180 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
MKS1-210ENST00000581180 FAM168BA1KXE4 195 aa9.5□□□□□ -0.89
MKS1-210ENST00000581180 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
MKS1-210ENST00000581180 SMIM13P0DJ93 91 aa9.49□□□□□ -0.89
MKS1-210ENST00000581180 MEIG1Q5JSS6 88 aa9.49□□□□□ -0.89
MKS1-210ENST00000581180 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
MKS1-210ENST00000581180 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
MKS1-210ENST00000581180 LINC00587B1AMM8 73 aa9.48□□□□□ -0.89
MKS1-210ENST00000581180 LINC00158P58513 81 aa9.48□□□□□ -0.89
MKS1-210ENST00000581180 JOSD1Q15040 202 aaPredicted RBP9.48□□□□□ -0.89
MKS1-210ENST00000581180 SND1-IT1Q9HBX3 110 aa9.48□□□□□ -0.89
MKS1-210ENST00000581180 A0A0J9YXY3 114 aa9.47□□□□□ -0.89
MKS1-210ENST00000581180 A0A0U1RRA0 63 aa9.47□□□□□ -0.89
MKS1-210ENST00000581180 Q8N1X5 172 aa9.47□□□□□ -0.89
MKS1-210ENST00000581180 ZNF815PA8K554 130 aa9.46□□□□□ -0.9
MKS1-210ENST00000581180 SERTAD4-AS1Q5TG53 156 aa9.46□□□□□ -0.9
MKS1-210ENST00000581180 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
MKS1-210ENST00000581180 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.9
MKS1-210ENST00000581180 HSBP1L1C9JCN9 74 aa9.45□□□□□ -0.9
MKS1-210ENST00000581180 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
MKS1-210ENST00000581180 PCP2Q8IVA1 136 aa9.45□□□□□ -0.9
MKS1-210ENST00000581180 MIR7-3HGQ8N6C7 128 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms