RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 IGLV5-39A0A0G2JS06 123 aa13.76□□□□□ -0.21
TSEN54-207ENST00000580013 SPINK8P0C7L1 97 aa13.76□□□□□ -0.21
TSEN54-207ENST00000580013 ODF1Q14990 250 aa13.76□□□□□ -0.21
TSEN54-207ENST00000580013 SPACA4Q8TDM5 124 aa13.76□□□□□ -0.21
TSEN54-207ENST00000580013 PACRGQ96M98 296 aaPredicted RBP13.76□□□□□ -0.21
TSEN54-207ENST00000580013 A0A096LNI7 61 aa13.75□□□□□ -0.21
TSEN54-207ENST00000580013 F8VRH5 84 aa13.75□□□□□ -0.21
TSEN54-207ENST00000580013 C6orf226Q5I0X4 101 aa13.75□□□□□ -0.21
TSEN54-207ENST00000580013 Q8N1X5 172 aa13.75□□□□□ -0.21
TSEN54-207ENST00000580013 H3BRM9 83 aa13.74□□□□□ -0.21
TSEN54-207ENST00000580013 TOMM7Q9P0U1 55 aa13.74□□□□□ -0.21
TSEN54-207ENST00000580013 LOC107984640A0A0U1RRK4 108 aa13.73□□□□□ -0.21
TSEN54-207ENST00000580013 PRSS2P07478 247 aa13.73□□□□□ -0.21
TSEN54-207ENST00000580013 TLX1NBP0CAT3 122 aa13.73□□□□□ -0.21
TSEN54-207ENST00000580013 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
TSEN54-207ENST00000580013 TRBV30A0A0K0K1B3 111 aa13.72□□□□□ -0.21
TSEN54-207ENST00000580013 SMR3BP02814 79 aaPredicted RBP13.72□□□□□ -0.21
TSEN54-207ENST00000580013 KRTAP4-5Q9BYR2 181 aa13.72□□□□□ -0.21
TSEN54-207ENST00000580013 EPM2AB3EWF7 344 aa13.71□□□□□ -0.21
TSEN54-207ENST00000580013 PTTG1IPP53801 180 aa13.71□□□□□ -0.21
TSEN54-207ENST00000580013 PKIGQ9Y2B9 76 aa13.71□□□□□ -0.21
TSEN54-207ENST00000580013 A0A087WYN8 130 aa13.7□□□□□ -0.22
TSEN54-207ENST00000580013 TMEM170BQ5T4T1 132 aa13.7□□□□□ -0.22
TSEN54-207ENST00000580013 PLAC8Q9NZF1 115 aa13.7□□□□□ -0.22
TSEN54-207ENST00000580013 TMEM223A0PJW6 202 aa13.69□□□□□ -0.22
TSEN54-207ENST00000580013 CKS1BP61024 79 aa13.69□□□□□ -0.22
TSEN54-207ENST00000580013 IGKV2-24A0A0C4DH68 120 aa13.68□□□□□ -0.22
TSEN54-207ENST00000580013 CXCL5P42830 114 aa13.68□□□□□ -0.22
TSEN54-207ENST00000580013 C9orf116Q5BN46 136 aaPredicted RBP13.68□□□□□ -0.22
TSEN54-207ENST00000580013 Q6ZRP5 223 aa13.68□□□□□ -0.22
TSEN54-207ENST00000580013 MAP1LC3CQ9BXW4 147 aa13.68□□□□□ -0.22
TSEN54-207ENST00000580013 LINC00474Q9P2X8 69 aa13.68□□□□□ -0.22
TSEN54-207ENST00000580013 H0Y8G0 127 aa13.67□□□□□ -0.22
TSEN54-207ENST00000580013 MAJINQ3KP22 176 aa13.67□□□□□ -0.22
TSEN54-207ENST00000580013 GAGE2BQ13066 116 aa13.66□□□□□ -0.22
TSEN54-207ENST00000580013 DPH3Q96FX2 82 aa13.66□□□□□ -0.22
TSEN54-207ENST00000580013 SYS1-DBNDD2H3BUS1 97 aa13.65□□□□□ -0.22
TSEN54-207ENST00000580013 NDUFC2-KCTD14E9PQ53 114 aa13.63□□□□□ -0.23
TSEN54-207ENST00000580013 STPG4Q8N801 248 aa13.63□□□□□ -0.23
TSEN54-207ENST00000580013 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
TSEN54-207ENST00000580013 A0A1W2PNN7 141 aa13.62□□□□□ -0.23
TSEN54-207ENST00000580013 DPM2O94777 84 aa13.62□□□□□ -0.23
TSEN54-207ENST00000580013 PLNP26678 52 aa13.62□□□□□ -0.23
TSEN54-207ENST00000580013 RPL18AQ02543 176 aaKnown RBP13.62□□□□□ -0.23
TSEN54-207ENST00000580013 ABCA13Q86UQ4 5058 aa13.61□□□□□ -0.23
TSEN54-207ENST00000580013 C3orf79P0CE67 100 aa13.61□□□□□ -0.23
TSEN54-207ENST00000580013 LINC01545Q5VT33 79 aa13.61□□□□□ -0.23
TSEN54-207ENST00000580013 PET117Q6UWS5 81 aa13.61□□□□□ -0.23
TSEN54-207ENST00000580013 LINC00528Q8N1L1 170 aa13.61□□□□□ -0.23
TSEN54-207ENST00000580013 IGKCP01834 107 aa13.6□□□□□ -0.23
TSEN54-207ENST00000580013 KRTAP10-4P60372 401 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-207ENST00000580013 Q5VSD8 79 aa13.6□□□□□ -0.23
TSEN54-207ENST00000580013 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-207ENST00000580013 FAM229AH3BQW9 127 aa13.59□□□□□ -0.23
TSEN54-207ENST00000580013 HIST3H2BBQ8N257 126 aa13.59□□□□□ -0.23
TSEN54-207ENST00000580013 SRRM2Q9UQ35 2752 aaKnown RBP13.58□□□□□ -0.24
TSEN54-207ENST00000580013 GAGE2EQ4V326 116 aa13.58□□□□□ -0.24
TSEN54-207ENST00000580013 C9orf129Q5T035 196 aaKnown RBP13.58□□□□□ -0.24
TSEN54-207ENST00000580013 KRTAP7-1Q8IUC3 87 aa13.58□□□□□ -0.24
TSEN54-207ENST00000580013 GAGE2DQ9UEU5 116 aa13.58□□□□□ -0.24
TSEN54-207ENST00000580013 FAM168BA1KXE4 195 aa13.54□□□□□ -0.24
TSEN54-207ENST00000580013 LEPROTO15243 131 aa13.54□□□□□ -0.24
TSEN54-207ENST00000580013 SFTA2Q6UW10 78 aa13.54□□□□□ -0.24
TSEN54-207ENST00000580013 HIST1H2BLQ99880 126 aa13.54□□□□□ -0.24
TSEN54-207ENST00000580013 TSPEAR-AS2P59090 65 aa13.52□□□□□ -0.25
TSEN54-207ENST00000580013 KRTDAPP60985 99 aa13.52□□□□□ -0.25
TSEN54-207ENST00000580013 PKHD1L1Q86WI1 4243 aa13.51□□□□□ -0.25
TSEN54-207ENST00000580013 C5orf52A6NGY3 159 aa13.51□□□□□ -0.25
TSEN54-207ENST00000580013 S100A6P06703 90 aa13.51□□□□□ -0.25
TSEN54-207ENST00000580013 SNRPEP62304 92 aaKnown RBP13.51□□□□□ -0.25
TSEN54-207ENST00000580013 PLA2G1BP04054 148 aaKnown RBP13.5□□□□□ -0.25
TSEN54-207ENST00000580013 COX17Q14061 63 aa13.5□□□□□ -0.25
TSEN54-207ENST00000580013 PLEKHB2Q96CS7 222 aa13.5□□□□□ -0.25
TSEN54-207ENST00000580013 XAGE1AQ9HD64 81 aa13.5□□□□□ -0.25
TSEN54-207ENST00000580013 ERG28Q9UKR5 140 aa13.5□□□□□ -0.25
TSEN54-207ENST00000580013 PCLOQ9Y6V0 5065 aa13.5□□□□□ -0.25
TSEN54-207ENST00000580013 E9PLD3 99 aa13.48□□□□□ -0.25
TSEN54-207ENST00000580013 PFN2P35080 140 aa13.48□□□□□ -0.25
TSEN54-207ENST00000580013 HERVK_113P61574 105 aa13.48□□□□□ -0.25
TSEN54-207ENST00000580013 NDUFA12Q9UI09 145 aa13.48□□□□□ -0.25
TSEN54-207ENST00000580013 J3QQQ9 107 aa13.47□□□□□ -0.25
TSEN54-207ENST00000580013 PHF5AQ7RTV0 110 aaKnown RBP13.47□□□□□ -0.25
TSEN54-207ENST00000580013 S100A2P29034 98 aa13.46□□□□□ -0.25
TSEN54-207ENST00000580013 RPL37AP61513 92 aaKnown RBP13.46□□□□□ -0.25
TSEN54-207ENST00000580013 HERV-K104P63124 156 aa13.46□□□□□ -0.25
TSEN54-207ENST00000580013 SERTAD4-AS1Q5TG53 156 aa13.46□□□□□ -0.25
TSEN54-207ENST00000580013 C7orf33Q8WU49 177 aa13.45□□□□□ -0.26
TSEN54-207ENST00000580013 PLA2G2DQ9UNK4 145 aa13.45□□□□□ -0.26
TSEN54-207ENST00000580013 MYMXA0A1B0GTQ4 84 aa13.44□□□□□ -0.26
TSEN54-207ENST00000580013 FAM19A5Q7Z5A7 132 aaPredicted RBP13.44□□□□□ -0.26
TSEN54-207ENST00000580013 NMUP48645 174 aa13.43□□□□□ -0.26
TSEN54-207ENST00000580013 SND1-IT1Q9HBX3 110 aa13.43□□□□□ -0.26
TSEN54-207ENST00000580013 KRTAP11-1Q8IUC1 163 aa13.42□□□□□ -0.26
TSEN54-207ENST00000580013 C22orf24Q9Y442 160 aa13.42□□□□□ -0.26
TSEN54-207ENST00000580013 C20orf202A1L168 122 aa13.41□□□□□ -0.26
TSEN54-207ENST00000580013 SMIM13P0DJ93 91 aa13.41□□□□□ -0.26
TSEN54-207ENST00000580013 INAFM2P0DMQ5 153 aa13.41□□□□□ -0.26
TSEN54-207ENST00000580013 IGLV5-37A0A075B6J1 123 aa13.4□□□□□ -0.26
TSEN54-207ENST00000580013 IGKV2D-26A0A0A0MRZ7 120 aa13.4□□□□□ -0.26
TSEN54-207ENST00000580013 LGALS3P17931 250 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 788 ms