RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 C14orf132Q9NPU4 83 aa7.18□□□□□ -1.26
MSI2-209ENST00000579483 ESRGQ1W209 222 aa7.18□□□□□ -1.26
MSI2-209ENST00000579483 MRPL55Q7Z7F7 128 aaKnown RBP7.18□□□□□ -1.26
MSI2-209ENST00000579483 AMELXQ99217 191 aa7.17□□□□□ -1.26
MSI2-209ENST00000579483 IGKV3D-7A0A0C4DH55 119 aa7.17□□□□□ -1.26
MSI2-209ENST00000579483 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
MSI2-209ENST00000579483 LINC00694P0DN24 101 aa7.16□□□□□ -1.26
MSI2-209ENST00000579483 HECTD1Q9ULT8 2610 aa7.16□□□□□ -1.26
MSI2-209ENST00000579483 A8MZ25 164 aa7.16□□□□□ -1.26
MSI2-209ENST00000579483 NDUFC2O95298 119 aa7.16□□□□□ -1.26
MSI2-209ENST00000579483 TMEM258P61165 79 aa7.16□□□□□ -1.26
MSI2-209ENST00000579483 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
MSI2-209ENST00000579483 LINC00643Q86TS7 51 aa7.15□□□□□ -1.26
MSI2-209ENST00000579483 Q8NAQ8 132 aa7.15□□□□□ -1.26
MSI2-209ENST00000579483 TEX49A0A1B0GTD5 131 aa7.15□□□□□ -1.26
MSI2-209ENST00000579483 LST1O00453 97 aa7.15□□□□□ -1.27
MSI2-209ENST00000579483 FAM19A4Q96LR4 140 aa7.14□□□□□ -1.27
MSI2-209ENST00000579483 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
MSI2-209ENST00000579483 Q6ZSN1 163 aa7.14□□□□□ -1.27
MSI2-209ENST00000579483 CIRBP-AS1Q8TBR5 109 aa7.14□□□□□ -1.27
MSI2-209ENST00000579483 SMIM11BQ8TCY0 68 aa7.14□□□□□ -1.27
MSI2-209ENST00000579483 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
MSI2-209ENST00000579483 MAPKAPK5-AS1Q8N8E1 139 aa7.13□□□□□ -1.27
MSI2-209ENST00000579483 K7EIL1 84 aa7.13□□□□□ -1.27
MSI2-209ENST00000579483 TRIAP1O43715 76 aa7.13□□□□□ -1.27
MSI2-209ENST00000579483 PLA2G1BP04054 148 aaKnown RBP7.13□□□□□ -1.27
MSI2-209ENST00000579483 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
MSI2-209ENST00000579483 GAS8-AS1O95177 125 aa7.13□□□□□ -1.27
MSI2-209ENST00000579483 SLPIP03973 132 aa7.12□□□□□ -1.27
MSI2-209ENST00000579483 NDUFV3P56181 108 aaKnown RBP7.12□□□□□ -1.27
MSI2-209ENST00000579483 LINC00315P59091 139 aa7.12□□□□□ -1.27
MSI2-209ENST00000579483 TAX1BP3O14907 124 aa7.12□□□□□ -1.27
MSI2-209ENST00000579483 Q6ZRU5 148 aa7.12□□□□□ -1.27
MSI2-209ENST00000579483 KIF25-AS1Q9Y6Z4 181 aa7.11□□□□□ -1.27
MSI2-209ENST00000579483 PCSK5Q92824 1860 aa7.11□□□□□ -1.27
MSI2-209ENST00000579483 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
MSI2-209ENST00000579483 WFDC2Q14508 124 aa7.1□□□□□ -1.27
MSI2-209ENST00000579483 LINC00337Q8N6G1 96 aa7.1□□□□□ -1.27
MSI2-209ENST00000579483 RTL8CO15255 209 aa7.09□□□□□ -1.27
MSI2-209ENST00000579483 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 LINC00588Q9Y4M8 146 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 AGRNO00468 2067 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 Q9BRP9 147 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 Q6ZRP5 223 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 LINC00336Q6ZUF6 198 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 C22orf24Q9Y442 160 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 J3KT08 172 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 KRTAP1-3Q8IUG1 177 aa7.08□□□□□ -1.28
MSI2-209ENST00000579483 CENPFP49454 3210 aa7.07□□□□□ -1.28
MSI2-209ENST00000579483 COL27A1Q8IZC6 1860 aaPredicted RBP7.07□□□□□ -1.28
MSI2-209ENST00000579483 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
MSI2-209ENST00000579483 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 IGHV3OR16-9A0A0B4J2B5 98 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 HELZ2Q9BYK8 2649 aaKnown RBP7.05□□□□□ -1.28
MSI2-209ENST00000579483 B5MCH6 92 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 J3QL48 77 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 Q8N814 137 aa7.05□□□□□ -1.28
MSI2-209ENST00000579483 TM2D3Q9BRN9 247 aa7.04□□□□□ -1.28
MSI2-209ENST00000579483 KRTAP1-1Q07627 177 aa7.03□□□□□ -1.28
MSI2-209ENST00000579483 CRYGAP11844 174 aa7.03□□□□□ -1.28
MSI2-209ENST00000579483 A8MTW9 85 aa7.02□□□□□ -1.29
MSI2-209ENST00000579483 SMCR5Q8TEV8 140 aa7.02□□□□□ -1.29
MSI2-209ENST00000579483 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
MSI2-209ENST00000579483 XGP55808 180 aa7.01□□□□□ -1.29
MSI2-209ENST00000579483 GVQW2A0A096LPI5 108 aaPredicted RBP7.01□□□□□ -1.29
MSI2-209ENST00000579483 SCXQ7RTU7 201 aa7.01□□□□□ -1.29
MSI2-209ENST00000579483 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
MSI2-209ENST00000579483 K7ERS5 55 aa7□□□□□ -1.29
MSI2-209ENST00000579483 ENHOQ6UWT2 76 aa7□□□□□ -1.29
MSI2-209ENST00000579483 PRLHP81277 87 aa6.99□□□□□ -1.29
MSI2-209ENST00000579483 Q8N9L7 120 aa6.99□□□□□ -1.29
MSI2-209ENST00000579483 FAM236DA0A1B0GTK5 79 aa6.99□□□□□ -1.29
MSI2-209ENST00000579483 FAM236CP0DP71 79 aa6.99□□□□□ -1.29
MSI2-209ENST00000579483 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
MSI2-209ENST00000579483 KRTAP10-3P60369 221 aa6.98□□□□□ -1.29
MSI2-209ENST00000579483 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
MSI2-209ENST00000579483 RPL37AP61513 92 aaKnown RBP6.98□□□□□ -1.29
MSI2-209ENST00000579483 URB1-AS1Q96HZ7 61 aa6.98□□□□□ -1.29
MSI2-209ENST00000579483 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
MSI2-209ENST00000579483 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
MSI2-209ENST00000579483 C5orf47Q569G3 176 aa6.98□□□□□ -1.29
MSI2-209ENST00000579483 TRBV7-6A0A0J9YX20 115 aa6.97□□□□□ -1.29
MSI2-209ENST00000579483 C6orf48Q9UBA6 75 aa6.97□□□□□ -1.29
MSI2-209ENST00000579483 C2orf91Q6ZV80 131 aa6.97□□□□□ -1.29
MSI2-209ENST00000579483 LINC00575Q6W349 94 aa6.97□□□□□ -1.29
MSI2-209ENST00000579483 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.29
MSI2-209ENST00000579483 LINC01546A6NGU7 62 aa6.96□□□□□ -1.29
MSI2-209ENST00000579483 Q6ZVQ6 151 aa6.96□□□□□ -1.29
MSI2-209ENST00000579483 IGHV6-1A0A0B4J1U7 121 aa6.96□□□□□ -1.3
MSI2-209ENST00000579483 TSPEAR-AS2P59090 65 aa6.96□□□□□ -1.3
MSI2-209ENST00000579483 SDIM1Q6ZPB5 146 aa6.96□□□□□ -1.3
MSI2-209ENST00000579483 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
MSI2-209ENST00000579483 MGAM2Q2M2H8 2515 aa6.96□□□□□ -1.3
MSI2-209ENST00000579483 TYMSOSQ8TAI1 123 aa6.96□□□□□ -1.3
MSI2-209ENST00000579483 A0A087WSZ3 146 aa6.95□□□□□ -1.3
MSI2-209ENST00000579483 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms