RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 PRSS2P07478 247 aa6.38□□□□□ -1.39
MKS1-208ENST00000579358 LINC00310P59036 64 aa6.38□□□□□ -1.39
MKS1-208ENST00000579358 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
MKS1-208ENST00000579358 TRAV12-1A0A0B4J245 112 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 IGKV2-24A0A0C4DH68 120 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 TRBV30A0A0K0K1B3 111 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 LOC105371267A0A1B0GV96 52 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 H3BRM9 83 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 TLX1NBP0CAT3 122 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 CXCL5P42830 114 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 PTTG1IPP53801 180 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 NDUFA6P56556 154 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 MAJINQ3KP22 176 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 IFI27L1Q96BM0 104 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 C6orf48Q9UBA6 75 aa6.37□□□□□ -1.39
MKS1-208ENST00000579358 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
MKS1-208ENST00000579358 ZNF22P17026 224 aaPredicted RBP6.36□□□□□ -1.39
MKS1-208ENST00000579358 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
MKS1-208ENST00000579358 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
MKS1-208ENST00000579358 DPH3Q96FX2 82 aa6.36□□□□□ -1.39
MKS1-208ENST00000579358 TOMM7Q9P0U1 55 aa6.36□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BKO60814 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 LEPROTL1O95214 131 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BJP06899 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 CKS1BP61024 79 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 RPL18AQ02543 176 aaKnown RBP6.35□□□□□ -1.39
MKS1-208ENST00000579358 GAGE2BQ13066 116 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
MKS1-208ENST00000579358 C2orf82Q6UX34 121 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 STPG4Q8N801 248 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
MKS1-208ENST00000579358 CHTOPQ9Y3Y2 248 aaKnown RBP6.35□□□□□ -1.39
MKS1-208ENST00000579358 IGLV5-39A0A0G2JS06 123 aa6.34□□□□□ -1.39
MKS1-208ENST00000579358 C11orf86A6NJI1 115 aa6.34□□□□□ -1.39
MKS1-208ENST00000579358 F8VRH5 84 aa6.34□□□□□ -1.39
MKS1-208ENST00000579358 SPINK8P0C7L1 97 aa6.34□□□□□ -1.39
MKS1-208ENST00000579358 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
MKS1-208ENST00000579358 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
MKS1-208ENST00000579358 HSPB8Q9UJY1 196 aa6.34□□□□□ -1.39
MKS1-208ENST00000579358 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
MKS1-208ENST00000579358 NDUFC2-KCTD14E9PQ53 114 aa6.33□□□□□ -1.4
MKS1-208ENST00000579358 NUPR1O60356 82 aa6.33□□□□□ -1.4
MKS1-208ENST00000579358 Q6ZRP5 223 aa6.33□□□□□ -1.4
MKS1-208ENST00000579358 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
MKS1-208ENST00000579358 RPL37AP61513 92 aaKnown RBP6.32□□□□□ -1.4
MKS1-208ENST00000579358 S100A12P80511 92 aa6.32□□□□□ -1.4
MKS1-208ENST00000579358 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
MKS1-208ENST00000579358 C7orf33Q8WU49 177 aa6.32□□□□□ -1.4
MKS1-208ENST00000579358 INAFM2P0DMQ5 153 aa6.31□□□□□ -1.4
MKS1-208ENST00000579358 ODF1Q14990 250 aa6.31□□□□□ -1.4
MKS1-208ENST00000579358 C9orf116Q5BN46 136 aaPredicted RBP6.31□□□□□ -1.4
MKS1-208ENST00000579358 FABP4P15090 132 aa6.3□□□□□ -1.4
MKS1-208ENST00000579358 COA6Q5JTJ3 125 aaKnown RBP6.3□□□□□ -1.4
MKS1-208ENST00000579358 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
MKS1-208ENST00000579358 A0A1W2PNN7 141 aa6.29□□□□□ -1.4
MKS1-208ENST00000579358 TMEM223A0PJW6 202 aa6.29□□□□□ -1.4
MKS1-208ENST00000579358 H0Y8G0 127 aa6.29□□□□□ -1.4
MKS1-208ENST00000579358 PLNP26678 52 aa6.29□□□□□ -1.4
MKS1-208ENST00000579358 CTAG1AP78358 180 aa6.29□□□□□ -1.4
MKS1-208ENST00000579358 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
MKS1-208ENST00000579358 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
MKS1-208ENST00000579358 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
MKS1-208ENST00000579358 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
MKS1-208ENST00000579358 DPM2O94777 84 aa6.26□□□□□ -1.41
MKS1-208ENST00000579358 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
MKS1-208ENST00000579358 FAM168BA1KXE4 195 aa6.25□□□□□ -1.41
MKS1-208ENST00000579358 IGKCP01834 107 aa6.25□□□□□ -1.41
MKS1-208ENST00000579358 PRR3P79522 188 aaKnown RBP6.25□□□□□ -1.41
MKS1-208ENST00000579358 COX17Q14061 63 aa6.25□□□□□ -1.41
MKS1-208ENST00000579358 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
MKS1-208ENST00000579358 SYS1-DBNDD2H3BUS1 97 aa6.24□□□□□ -1.41
MKS1-208ENST00000579358 M0QXV9 152 aa6.24□□□□□ -1.41
MKS1-208ENST00000579358 HERVK_113P61574 105 aa6.24□□□□□ -1.41
MKS1-208ENST00000579358 PHF5AQ7RTV0 110 aaKnown RBP6.24□□□□□ -1.41
MKS1-208ENST00000579358 KRTAP7-1Q8IUC3 87 aa6.24□□□□□ -1.41
MKS1-208ENST00000579358 PMCHL2Q9BQD1 86 aa6.24□□□□□ -1.41
MKS1-208ENST00000579358 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
MKS1-208ENST00000579358 ERG28Q9UKR5 140 aa6.24□□□□□ -1.41
MKS1-208ENST00000579358 HNRNPA3P51991 378 aaKnown RBP6.23□□□□□ -1.41
MKS1-208ENST00000579358 HERV-K104P63124 156 aa6.23□□□□□ -1.41
MKS1-208ENST00000579358 PET117Q6UWS5 81 aa6.23□□□□□ -1.41
MKS1-208ENST00000579358 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
MKS1-208ENST00000579358 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
MKS1-208ENST00000579358 LEPROTO15243 131 aa6.22□□□□□ -1.41
MKS1-208ENST00000579358 PFN2P35080 140 aa6.22□□□□□ -1.41
MKS1-208ENST00000579358 SERTAD4-AS1Q5TG53 156 aa6.22□□□□□ -1.41
MKS1-208ENST00000579358 LINC01545Q5VT33 79 aa6.22□□□□□ -1.41
MKS1-208ENST00000579358 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
MKS1-208ENST00000579358 TP73-AS1Q9UF72 201 aa6.22□□□□□ -1.41
MKS1-208ENST00000579358 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.42
MKS1-208ENST00000579358 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms