RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 ATP5LO75964 103 aa11.85□□□□□ -0.51
CDKN2A-213ENST00000579122 TIMM17AQ99595 171 aa11.85□□□□□ -0.51
CDKN2A-213ENST00000579122 CDC42SE2Q9NRR3 84 aa11.85□□□□□ -0.51
CDKN2A-213ENST00000579122 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
CDKN2A-213ENST00000579122 LPAP08519 4548 aa11.85□□□□□ -0.51
CDKN2A-213ENST00000579122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
CDKN2A-213ENST00000579122 OPRPNQ99935 248 aaPredicted RBP11.84□□□□□ -0.51
CDKN2A-213ENST00000579122 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
CDKN2A-213ENST00000579122 LOC107984640A0A0U1RRK4 108 aa11.83□□□□□ -0.52
CDKN2A-213ENST00000579122 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
CDKN2A-213ENST00000579122 FAM104AQ969W3 186 aa11.83□□□□□ -0.52
CDKN2A-213ENST00000579122 IFI27L1Q96BM0 104 aa11.83□□□□□ -0.52
CDKN2A-213ENST00000579122 NPSP0C0P6 89 aa11.82□□□□□ -0.52
CDKN2A-213ENST00000579122 MRPS36P82909 103 aaKnown RBP11.82□□□□□ -0.52
CDKN2A-213ENST00000579122 GAGE2BQ13066 116 aa11.82□□□□□ -0.52
CDKN2A-213ENST00000579122 Q6ZN92 141 aa11.81□□□□□ -0.52
CDKN2A-213ENST00000579122 Q6ZUT4 128 aa11.81□□□□□ -0.52
CDKN2A-213ENST00000579122 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
CDKN2A-213ENST00000579122 RNASE13Q5GAN3 156 aaKnown RBP11.8□□□□□ -0.52
CDKN2A-213ENST00000579122 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
CDKN2A-213ENST00000579122 MAP1LC3CQ9BXW4 147 aa11.8□□□□□ -0.52
CDKN2A-213ENST00000579122 VCX2Q9H322 139 aa11.8□□□□□ -0.52
CDKN2A-213ENST00000579122 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
CDKN2A-213ENST00000579122 MALP21145 153 aa11.79□□□□□ -0.52
CDKN2A-213ENST00000579122 ZC2HC1BQ5TFG8 222 aa11.79□□□□□ -0.52
CDKN2A-213ENST00000579122 COX7A2LO14548 114 aa11.78□□□□□ -0.52
CDKN2A-213ENST00000579122 KRTDAPP60985 99 aa11.78□□□□□ -0.52
CDKN2A-213ENST00000579122 AMELXQ99217 191 aa11.78□□□□□ -0.52
CDKN2A-213ENST00000579122 PSORS1C2Q9UIG4 136 aa11.78□□□□□ -0.52
CDKN2A-213ENST00000579122 H0Y8G0 127 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 APOMO95445 188 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 C3orf79P0CE67 100 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 PMVKQ15126 192 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 TEX43Q6ZNM6 134 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 OR10D4PQ8NGN7 298 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 CAMK2N2Q96S95 79 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 CST9LQ9H4G1 147 aa11.77□□□□□ -0.53
CDKN2A-213ENST00000579122 C9orf116Q5BN46 136 aaPredicted RBP11.76□□□□□ -0.53
CDKN2A-213ENST00000579122 C2orf48Q96LS8 159 aa11.76□□□□□ -0.53
CDKN2A-213ENST00000579122 SYS1-DBNDD2H3BUS1 97 aa11.75□□□□□ -0.53
CDKN2A-213ENST00000579122 C2orf88Q9BSF0 95 aa11.75□□□□□ -0.53
CDKN2A-213ENST00000579122 TRAV12-1A0A0B4J245 112 aa11.74□□□□□ -0.53
CDKN2A-213ENST00000579122 TRAV13-1A0A0B4J241 112 aa11.73□□□□□ -0.53
CDKN2A-213ENST00000579122 PET117Q6UWS5 81 aa11.73□□□□□ -0.53
CDKN2A-213ENST00000579122 RPL18AQ02543 176 aaKnown RBP11.72□□□□□ -0.53
CDKN2A-213ENST00000579122 RNF151Q2KHN1 245 aa11.72□□□□□ -0.53
CDKN2A-213ENST00000579122 C1orf137Q5JT78 98 aa11.72□□□□□ -0.53
CDKN2A-213ENST00000579122 CHTOPQ9Y3Y2 248 aaKnown RBP11.72□□□□□ -0.53
CDKN2A-213ENST00000579122 UBE2D1P51668 147 aa11.71□□□□□ -0.53
CDKN2A-213ENST00000579122 PHF5AQ7RTV0 110 aaKnown RBP11.71□□□□□ -0.53
CDKN2A-213ENST00000579122 LOC105371267A0A1B0GV96 52 aa11.7□□□□□ -0.54
CDKN2A-213ENST00000579122 C5orf38Q86SI9 138 aa11.7□□□□□ -0.54
CDKN2A-213ENST00000579122 AKR1D1P51857 326 aa11.69□□□□□ -0.54
CDKN2A-213ENST00000579122 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
CDKN2A-213ENST00000579122 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
CDKN2A-213ENST00000579122 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
CDKN2A-213ENST00000579122 MRPL35Q9NZE8 188 aaKnown RBP11.69□□□□□ -0.54
CDKN2A-213ENST00000579122 C20orf202A1L168 122 aa11.68□□□□□ -0.54
CDKN2A-213ENST00000579122 F8VRH5 84 aa11.68□□□□□ -0.54
CDKN2A-213ENST00000579122 DIRC1Q969H9 104 aa11.68□□□□□ -0.54
CDKN2A-213ENST00000579122 IGLV7-43P04211 117 aa11.67□□□□□ -0.54
CDKN2A-213ENST00000579122 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
CDKN2A-213ENST00000579122 F8WDY8 70 aa11.66□□□□□ -0.54
CDKN2A-213ENST00000579122 SCGB1D1O95968 90 aa11.66□□□□□ -0.54
CDKN2A-213ENST00000579122 IGLC3P0DOY3 106 aa11.66□□□□□ -0.54
CDKN2A-213ENST00000579122 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
CDKN2A-213ENST00000579122 PRR26Q8N8Z3 221 aa11.66□□□□□ -0.54
CDKN2A-213ENST00000579122 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.54
CDKN2A-213ENST00000579122 DPM2O94777 84 aa11.65□□□□□ -0.54
CDKN2A-213ENST00000579122 SEC11AP67812 179 aa11.65□□□□□ -0.54
CDKN2A-213ENST00000579122 GEMIN7Q9H840 131 aaKnown RBP11.65□□□□□ -0.54
CDKN2A-213ENST00000579122 MUC2Q02817 5179 aa11.64□□□□□ -0.55
CDKN2A-213ENST00000579122 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
CDKN2A-213ENST00000579122 PLNP26678 52 aa11.64□□□□□ -0.55
CDKN2A-213ENST00000579122 JOSD1Q15040 202 aaPredicted RBP11.64□□□□□ -0.55
CDKN2A-213ENST00000579122 H0Y9J4 135 aa11.63□□□□□ -0.55
CDKN2A-213ENST00000579122 IGKCP01834 107 aa11.63□□□□□ -0.55
CDKN2A-213ENST00000579122 HERVK_113P63121 156 aa11.63□□□□□ -0.55
CDKN2A-213ENST00000579122 A0A087WZ39 114 aa11.62□□□□□ -0.55
CDKN2A-213ENST00000579122 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
CDKN2A-213ENST00000579122 NDUFA1O15239 70 aa11.61□□□□□ -0.55
CDKN2A-213ENST00000579122 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
CDKN2A-213ENST00000579122 LINC00469Q8N7U9 141 aa11.61□□□□□ -0.55
CDKN2A-213ENST00000579122 IGLV1-50A0A075B6I6 118 aa11.6□□□□□ -0.55
CDKN2A-213ENST00000579122 IGHV3OR16-9A0A0B4J2B5 98 aa11.6□□□□□ -0.55
CDKN2A-213ENST00000579122 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
CDKN2A-213ENST00000579122 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
CDKN2A-213ENST00000579122 KRTAP11-1Q8IUC1 163 aa11.6□□□□□ -0.55
CDKN2A-213ENST00000579122 ATOH7Q8N100 152 aa11.6□□□□□ -0.55
CDKN2A-213ENST00000579122 IGLV5-45A0A087WSX0 123 aa11.59□□□□□ -0.55
CDKN2A-213ENST00000579122 PYY3Q5JQD4 70 aa11.59□□□□□ -0.55
CDKN2A-213ENST00000579122 TMEM170BQ5T4T1 132 aa11.59□□□□□ -0.55
CDKN2A-213ENST00000579122 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
CDKN2A-213ENST00000579122 C10orf25Q5T742 122 aa11.58□□□□□ -0.56
CDKN2A-213ENST00000579122 H3BRM9 83 aa11.57□□□□□ -0.56
CDKN2A-213ENST00000579122 KRTAP1-4P0C5Y4 121 aa11.57□□□□□ -0.56
CDKN2A-213ENST00000579122 UNQ6190/PRO20217Q6UXQ8 127 aa11.57□□□□□ -0.56
CDKN2A-213ENST00000579122 FAM19A5Q7Z5A7 132 aaPredicted RBP11.57□□□□□ -0.56
CDKN2A-213ENST00000579122 C6orf48Q9UBA6 75 aa11.57□□□□□ -0.56
CDKN2A-213ENST00000579122 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms