RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 C6orf48Q9UBA6 75 aa4.13□□□□□ -1.75
TRAF4-213ENST00000578917 A0A1W2PNN7 141 aa4.12□□□□□ -1.75
TRAF4-213ENST00000578917 NDUFC2-KCTD14E9PQ53 114 aa4.12□□□□□ -1.75
TRAF4-213ENST00000578917 SPINK8P0C7L1 97 aa4.12□□□□□ -1.75
TRAF4-213ENST00000578917 KIAA0087Q14695 138 aa4.12□□□□□ -1.75
TRAF4-213ENST00000578917 Q6ZRP5 223 aa4.12□□□□□ -1.75
TRAF4-213ENST00000578917 FAM19A3Q7Z5A8 133 aa4.12□□□□□ -1.75
TRAF4-213ENST00000578917 Q8IZM0 81 aa4.12□□□□□ -1.75
TRAF4-213ENST00000578917 CHCHD1Q96BP2 118 aaKnown RBP4.12□□□□□ -1.75
TRAF4-213ENST00000578917 F8VRH5 84 aa4.11□□□□□ -1.75
TRAF4-213ENST00000578917 HSBP1O75506 76 aa4.11□□□□□ -1.75
TRAF4-213ENST00000578917 OXTP01178 125 aa4.11□□□□□ -1.75
TRAF4-213ENST00000578917 TRGC2P03986 189 aa4.11□□□□□ -1.75
TRAF4-213ENST00000578917 PDZD11Q5EBL8 140 aa4.11□□□□□ -1.75
TRAF4-213ENST00000578917 TMEM170BQ5T4T1 132 aa4.11□□□□□ -1.75
TRAF4-213ENST00000578917 FAM19A5Q7Z5A7 132 aaPredicted RBP4.11□□□□□ -1.75
TRAF4-213ENST00000578917 COX7B2Q8TF08 81 aa4.11□□□□□ -1.75
TRAF4-213ENST00000578917 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
TRAF4-213ENST00000578917 SMIM1B2RUZ4 78 aa4.1□□□□□ -1.75
TRAF4-213ENST00000578917 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
TRAF4-213ENST00000578917 CXCL5P42830 114 aa4.1□□□□□ -1.75
TRAF4-213ENST00000578917 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
TRAF4-213ENST00000578917 UBE2BP63146 152 aa4.1□□□□□ -1.75
TRAF4-213ENST00000578917 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
TRAF4-213ENST00000578917 URB1-AS1Q96HZ7 61 aa4.1□□□□□ -1.75
TRAF4-213ENST00000578917 YPEL4Q96NS1 127 aa4.1□□□□□ -1.75
TRAF4-213ENST00000578917 CHTOPQ9Y3Y2 248 aaKnown RBP4.1□□□□□ -1.75
TRAF4-213ENST00000578917 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
TRAF4-213ENST00000578917 FAM168BA1KXE4 195 aa4.09□□□□□ -1.75
TRAF4-213ENST00000578917 H0Y8G0 127 aa4.09□□□□□ -1.75
TRAF4-213ENST00000578917 HNRNPA3P51991 378 aaKnown RBP4.09□□□□□ -1.75
TRAF4-213ENST00000578917 PRR3P79522 188 aaKnown RBP4.09□□□□□ -1.75
TRAF4-213ENST00000578917 C1orf137Q5JT78 98 aa4.09□□□□□ -1.75
TRAF4-213ENST00000578917 FAM19A2Q8N3H0 131 aa4.09□□□□□ -1.75
TRAF4-213ENST00000578917 IFI27L1Q96BM0 104 aa4.09□□□□□ -1.75
TRAF4-213ENST00000578917 XAGE1AQ9HD64 81 aa4.09□□□□□ -1.75
TRAF4-213ENST00000578917 HERC1Q15751 4861 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 IGLV5-45A0A087WSX0 123 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 A0A096LNJ9 63 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 M0QXV9 152 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 ATP6V1G1O75348 118 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 IGLC3P0DOY3 106 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
TRAF4-213ENST00000578917 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 PSORS1C2Q9UIG4 136 aa4.08□□□□□ -1.76
TRAF4-213ENST00000578917 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 C11orf86A6NJI1 115 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 COLCA2A8K830 154 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 SERF1AO75920 110 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 LEPROTL1O95214 131 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 FABP4P15090 132 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 ZNF22P17026 224 aaPredicted RBP4.07□□□□□ -1.76
TRAF4-213ENST00000578917 PFN2P35080 140 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 SPINK6Q6UWN8 80 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 ZNF625Q96I27 306 aaPredicted RBP4.07□□□□□ -1.76
TRAF4-213ENST00000578917 DNAH8Q96JB1 4490 aa4.07□□□□□ -1.76
TRAF4-213ENST00000578917 TRAV12-1A0A0B4J245 112 aa4.06□□□□□ -1.76
TRAF4-213ENST00000578917 C9orf129Q5T035 196 aaKnown RBP4.06□□□□□ -1.76
TRAF4-213ENST00000578917 NKAPP1Q8N9T2 125 aa4.06□□□□□ -1.76
TRAF4-213ENST00000578917 HSPB8Q9UJY1 196 aa4.06□□□□□ -1.76
TRAF4-213ENST00000578917 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
TRAF4-213ENST00000578917 SCO1O75880 301 aa4.05□□□□□ -1.76
TRAF4-213ENST00000578917 LINC00158P58513 81 aa4.05□□□□□ -1.76
TRAF4-213ENST00000578917 SERTAD4-AS1Q5TG53 156 aa4.05□□□□□ -1.76
TRAF4-213ENST00000578917 SFTA2Q6UW10 78 aa4.05□□□□□ -1.76
TRAF4-213ENST00000578917 C22orf24Q9Y442 160 aa4.05□□□□□ -1.76
TRAF4-213ENST00000578917 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
TRAF4-213ENST00000578917 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
TRAF4-213ENST00000578917 PLNP26678 52 aa4.04□□□□□ -1.76
TRAF4-213ENST00000578917 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRAF4-213ENST00000578917 COX17Q14061 63 aa4.04□□□□□ -1.76
TRAF4-213ENST00000578917 MRPL55Q7Z7F7 128 aaKnown RBP4.04□□□□□ -1.76
TRAF4-213ENST00000578917 DIRC1Q969H9 104 aa4.04□□□□□ -1.76
TRAF4-213ENST00000578917 MAP1LC3CQ9BXW4 147 aa4.04□□□□□ -1.76
TRAF4-213ENST00000578917 ERG28Q9UKR5 140 aa4.04□□□□□ -1.76
TRAF4-213ENST00000578917 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
TRAF4-213ENST00000578917 TMEM223A0PJW6 202 aa4.03□□□□□ -1.76
TRAF4-213ENST00000578917 RPL37AP8A6NKH3 93 aa4.03□□□□□ -1.76
TRAF4-213ENST00000578917 DPM2O94777 84 aa4.03□□□□□ -1.76
TRAF4-213ENST00000578917 RPL24P83731 157 aaKnown RBP4.03□□□□□ -1.76
TRAF4-213ENST00000578917 MEIG1Q5JSS6 88 aa4.03□□□□□ -1.76
TRAF4-213ENST00000578917 MYMXA0A1B0GTQ4 84 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 LINC00587B1AMM8 73 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 NUPR1O60356 82 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 HERVK_113P61574 105 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 ODF1Q14990 250 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 LINC00167Q96N53 147 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 PMCHL2Q9BQD1 86 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 SND1-IT1Q9HBX3 110 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 TP73-AS1Q9UF72 201 aa4.02□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BKO60814 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 IGKCP01834 107 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BJP06899 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 LGALS3P17931 250 aaKnown RBP4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BOP23527 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BBP33778 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BDP58876 126 aa4.01□□□□□ -1.77
TRAF4-213ENST00000578917 HIST1H2BCP62807 126 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms