RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 hDV102S1A0JD36 115 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 LEPROTL1O95214 131 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 FABP4P15090 132 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 COX6A2Q02221 97 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 PMVKQ15126 192 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 PAPPA-AS1Q5QFB9 102 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 LINC00242Q5T6M2 205 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 CST9LQ9H4G1 147 aa4.44□□□□□ -1.7
CDK5RAP3-209ENST00000578663 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
CDK5RAP3-209ENST00000578663 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
CDK5RAP3-209ENST00000578663 C5orf38Q86SI9 138 aa4.43□□□□□ -1.7
CDK5RAP3-209ENST00000578663 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
CDK5RAP3-209ENST00000578663 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 IGHV3OR16-9A0A0B4J2B5 98 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 H0Y8G0 127 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 COX7A2LO14548 114 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 SLPIP03973 132 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 Q6ZRP5 223 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 FAM19A3Q7Z5A8 133 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 STPG4Q8N801 248 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 C15orf56Q8N910 161 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 HSPB8Q9UJY1 196 aa4.42□□□□□ -1.7
CDK5RAP3-209ENST00000578663 USH2AO75445 5202 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 TRAV12-1A0A0B4J245 112 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 TINCRA0A1B0GVN0 87 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 C11orf86A6NJI1 115 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 S100A6P06703 90 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 IGLC3P0DOY3 106 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 MAJINQ3KP22 176 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 HIGD2BQ4VC39 106 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 PACRGQ96M98 296 aaPredicted RBP4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 GEMIN7Q9H840 131 aaKnown RBP4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 LINC00474Q9P2X8 69 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 PKIGQ9Y2B9 76 aa4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 CHTOPQ9Y3Y2 248 aaKnown RBP4.41□□□□□ -1.7
CDK5RAP3-209ENST00000578663 IGLV5-45A0A087WSX0 123 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 A0A087WZ39 114 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 ZNF22P17026 224 aaPredicted RBP4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 MALP21145 153 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 HERVK_113P63121 156 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 LINC00469Q8N7U9 141 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 LINC00526Q96FQ7 95 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 HIST1H2BLQ99880 126 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 PMCHL2Q9BQD1 86 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 MAP1LC3CQ9BXW4 147 aa4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
CDK5RAP3-209ENST00000578663 GVQW2A0A096LPI5 108 aaPredicted RBP4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 IGKV2-24A0A0C4DH68 120 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 LOC105371267A0A1B0GV96 52 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 C5orf52A6NGY3 159 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 F8VRH5 84 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 SYS1-DBNDD2H3BUS1 97 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 C3orf79P0CE67 100 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 KRTDAPP60985 99 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 SEC11AP67812 179 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 SPAG11BQ08648 103 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 CFAP161Q6P656 301 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 ORAOV1Q8WV07 137 aa4.39□□□□□ -1.71
CDK5RAP3-209ENST00000578663 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
CDK5RAP3-209ENST00000578663 SMIM1B2RUZ4 78 aa4.38□□□□□ -1.71
CDK5RAP3-209ENST00000578663 APOMO95445 188 aa4.38□□□□□ -1.71
CDK5RAP3-209ENST00000578663 SPINK8P0C7L1 97 aa4.38□□□□□ -1.71
CDK5RAP3-209ENST00000578663 S100A2P29034 98 aa4.38□□□□□ -1.71
CDK5RAP3-209ENST00000578663 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
CDK5RAP3-209ENST00000578663 A0A096LNI7 61 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 DPM2O94777 84 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 PRR4Q16378 134 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 TMEM170BQ5T4T1 132 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 PET117Q6UWS5 81 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 OR10D4PQ8NGN7 298 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 TOMM7Q9P0U1 55 aa4.37□□□□□ -1.71
CDK5RAP3-209ENST00000578663 IGLV1-50A0A075B6I6 118 aa4.36□□□□□ -1.71
CDK5RAP3-209ENST00000578663 IGLV5-39A0A0G2JS06 123 aa4.36□□□□□ -1.71
CDK5RAP3-209ENST00000578663 TMEM223A0PJW6 202 aa4.36□□□□□ -1.71
CDK5RAP3-209ENST00000578663 H3BRM9 83 aa4.36□□□□□ -1.71
CDK5RAP3-209ENST00000578663 ZNF561-AS1K7EIQ3 104 aa4.36□□□□□ -1.71
CDK5RAP3-209ENST00000578663 IGKCP01834 107 aa4.36□□□□□ -1.71
CDK5RAP3-209ENST00000578663 C10orf25Q5T742 122 aa4.36□□□□□ -1.71
CDK5RAP3-209ENST00000578663 PRSS2P07478 247 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 PLNP26678 52 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 C2orf82Q6UX34 121 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 UNQ6190/PRO20217Q6UXQ8 127 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 Q8IZM0 81 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 C2orf48Q96LS8 159 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
CDK5RAP3-209ENST00000578663 C20orf202A1L168 122 aa4.34□□□□□ -1.71
CDK5RAP3-209ENST00000578663 SYCNQ0VAF6 134 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms