RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 LINC00528Q8N1L1 170 aa13.78□□□□□ -0.2
CDC42EP4-203ENST00000578516 A0A087WYN8 130 aa13.77□□□□□ -0.21
CDC42EP4-203ENST00000578516 GAGE2BQ13066 116 aa13.77□□□□□ -0.21
CDC42EP4-203ENST00000578516 H0Y8G0 127 aa13.76□□□□□ -0.21
CDC42EP4-203ENST00000578516 FABP4P15090 132 aa13.76□□□□□ -0.21
CDC42EP4-203ENST00000578516 C9orf116Q5BN46 136 aaPredicted RBP13.76□□□□□ -0.21
CDC42EP4-203ENST00000578516 EPM2AB3EWF7 344 aa13.75□□□□□ -0.21
CDC42EP4-203ENST00000578516 RPL18AQ02543 176 aaKnown RBP13.75□□□□□ -0.21
CDC42EP4-203ENST00000578516 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
CDC42EP4-203ENST00000578516 CHTOPQ9Y3Y2 248 aaKnown RBP13.75□□□□□ -0.21
CDC42EP4-203ENST00000578516 ABCA13Q86UQ4 5058 aa13.74□□□□□ -0.21
CDC42EP4-203ENST00000578516 LOC107984640A0A0U1RRK4 108 aa13.74□□□□□ -0.21
CDC42EP4-203ENST00000578516 PRSS2P07478 247 aa13.74□□□□□ -0.21
CDC42EP4-203ENST00000578516 Q8IZM0 81 aa13.74□□□□□ -0.21
CDC42EP4-203ENST00000578516 DPH3Q96FX2 82 aa13.74□□□□□ -0.21
CDC42EP4-203ENST00000578516 LEPROTL1O95214 131 aa13.73□□□□□ -0.21
CDC42EP4-203ENST00000578516 PTTG1IPP53801 180 aa13.73□□□□□ -0.21
CDC42EP4-203ENST00000578516 C6orf226Q5I0X4 101 aa13.71□□□□□ -0.21
CDC42EP4-203ENST00000578516 STPG4Q8N801 248 aa13.71□□□□□ -0.21
CDC42EP4-203ENST00000578516 COX7B2Q8TF08 81 aa13.71□□□□□ -0.21
CDC42EP4-203ENST00000578516 TRAV12-1A0A0B4J245 112 aa13.7□□□□□ -0.22
CDC42EP4-203ENST00000578516 RNF151Q2KHN1 245 aa13.7□□□□□ -0.22
CDC42EP4-203ENST00000578516 TMEM170BQ5T4T1 132 aa13.7□□□□□ -0.22
CDC42EP4-203ENST00000578516 CKS1BP61024 79 aa13.69□□□□□ -0.22
CDC42EP4-203ENST00000578516 ODF1Q14990 250 aa13.69□□□□□ -0.22
CDC42EP4-203ENST00000578516 Q6ZRP5 223 aa13.69□□□□□ -0.22
CDC42EP4-203ENST00000578516 PMCHL2Q9BQD1 86 aa13.69□□□□□ -0.22
CDC42EP4-203ENST00000578516 PLAC8Q9NZF1 115 aa13.69□□□□□ -0.22
CDC42EP4-203ENST00000578516 F8WDY8 70 aa13.68□□□□□ -0.22
CDC42EP4-203ENST00000578516 H3BRM9 83 aa13.68□□□□□ -0.22
CDC42EP4-203ENST00000578516 F8VRH5 84 aa13.67□□□□□ -0.22
CDC42EP4-203ENST00000578516 GAGE2EQ4V326 116 aa13.67□□□□□ -0.22
CDC42EP4-203ENST00000578516 GAGE2DQ9UEU5 116 aa13.67□□□□□ -0.22
CDC42EP4-203ENST00000578516 VPS13BQ7Z7G8 4022 aa13.67□□□□□ -0.22
CDC42EP4-203ENST00000578516 IGLV5-39A0A0G2JS06 123 aa13.66□□□□□ -0.22
CDC42EP4-203ENST00000578516 TRBV30A0A0K0K1B3 111 aa13.66□□□□□ -0.22
CDC42EP4-203ENST00000578516 A0A1W2PNN7 141 aa13.66□□□□□ -0.22
CDC42EP4-203ENST00000578516 FAM229AH3BQW9 127 aa13.66□□□□□ -0.22
CDC42EP4-203ENST00000578516 KRTAP10-4P60372 401 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP4-203ENST00000578516 FAM168BA1KXE4 195 aa13.65□□□□□ -0.22
CDC42EP4-203ENST00000578516 HSPB8Q9UJY1 196 aa13.65□□□□□ -0.22
CDC42EP4-203ENST00000578516 TLX1NBP0CAT3 122 aa13.64□□□□□ -0.23
CDC42EP4-203ENST00000578516 PCLOQ9Y6V0 5065 aa13.64□□□□□ -0.23
CDC42EP4-203ENST00000578516 PKIGQ9Y2B9 76 aa13.63□□□□□ -0.23
CDC42EP4-203ENST00000578516 TMEM223A0PJW6 202 aa13.62□□□□□ -0.23
CDC42EP4-203ENST00000578516 NDUFC2-KCTD14E9PQ53 114 aa13.61□□□□□ -0.23
CDC42EP4-203ENST00000578516 COA6Q5JTJ3 125 aaKnown RBP13.61□□□□□ -0.23
CDC42EP4-203ENST00000578516 LINC00474Q9P2X8 69 aa13.61□□□□□ -0.23
CDC42EP4-203ENST00000578516 CXCL5P42830 114 aa13.6□□□□□ -0.23
CDC42EP4-203ENST00000578516 RPL37AP61513 92 aaKnown RBP13.6□□□□□ -0.23
CDC42EP4-203ENST00000578516 C9orf129Q5T035 196 aaKnown RBP13.6□□□□□ -0.23
CDC42EP4-203ENST00000578516 KRTAP7-1Q8IUC3 87 aa13.6□□□□□ -0.23
CDC42EP4-203ENST00000578516 FAM19A5Q7Z5A7 132 aaPredicted RBP13.59□□□□□ -0.23
CDC42EP4-203ENST00000578516 XAGE1AQ9HD64 81 aa13.59□□□□□ -0.23
CDC42EP4-203ENST00000578516 PLA2G1BP04054 148 aaKnown RBP13.58□□□□□ -0.24
CDC42EP4-203ENST00000578516 HNRNPA3P51991 378 aaKnown RBP13.58□□□□□ -0.24
CDC42EP4-203ENST00000578516 ZNF625Q96I27 306 aaPredicted RBP13.58□□□□□ -0.24
CDC42EP4-203ENST00000578516 INAFM2P0DMQ5 153 aa13.57□□□□□ -0.24
CDC42EP4-203ENST00000578516 PHF5AQ7RTV0 110 aaKnown RBP13.57□□□□□ -0.24
CDC42EP4-203ENST00000578516 MAP1LC3CQ9BXW4 147 aa13.57□□□□□ -0.24
CDC42EP4-203ENST00000578516 FLG2Q5D862 2391 aaPredicted RBP13.56□□□□□ -0.24
CDC42EP4-203ENST00000578516 SYS1-DBNDD2H3BUS1 97 aa13.55□□□□□ -0.24
CDC42EP4-203ENST00000578516 TSPEAR-AS2P59090 65 aa13.55□□□□□ -0.24
CDC42EP4-203ENST00000578516 PKHD1L1Q86WI1 4243 aa13.54□□□□□ -0.24
CDC42EP4-203ENST00000578516 DPM2O94777 84 aa13.54□□□□□ -0.24
CDC42EP4-203ENST00000578516 PFN2P35080 140 aa13.53□□□□□ -0.24
CDC42EP4-203ENST00000578516 SERTAD4-AS1Q5TG53 156 aa13.53□□□□□ -0.24
CDC42EP4-203ENST00000578516 IGKCP01834 107 aa13.52□□□□□ -0.25
CDC42EP4-203ENST00000578516 C3orf79P0CE67 100 aa13.52□□□□□ -0.25
CDC42EP4-203ENST00000578516 KRTAP11-1Q8IUC1 163 aa13.52□□□□□ -0.25
CDC42EP4-203ENST00000578516 PLNP26678 52 aa13.51□□□□□ -0.25
CDC42EP4-203ENST00000578516 C7orf33Q8WU49 177 aa13.51□□□□□ -0.25
CDC42EP4-203ENST00000578516 SRRM2Q9UQ35 2752 aaKnown RBP13.5□□□□□ -0.25
CDC42EP4-203ENST00000578516 KRTDAPP60985 99 aa13.5□□□□□ -0.25
CDC42EP4-203ENST00000578516 ERG28Q9UKR5 140 aa13.49□□□□□ -0.25
CDC42EP4-203ENST00000578516 A0A0U1RRA0 63 aa13.48□□□□□ -0.25
CDC42EP4-203ENST00000578516 M0QXV9 152 aa13.48□□□□□ -0.25
CDC42EP4-203ENST00000578516 PRR3P79522 188 aaKnown RBP13.48□□□□□ -0.25
CDC42EP4-203ENST00000578516 LINC01545Q5VT33 79 aa13.48□□□□□ -0.25
CDC42EP4-203ENST00000578516 HIST3H2BBQ8N257 126 aa13.47□□□□□ -0.25
CDC42EP4-203ENST00000578516 LEPROTO15243 131 aa13.45□□□□□ -0.26
CDC42EP4-203ENST00000578516 PET117Q6UWS5 81 aa13.45□□□□□ -0.26
CDC42EP4-203ENST00000578516 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
CDC42EP4-203ENST00000578516 Q8NDZ9 215 aa13.43□□□□□ -0.26
CDC42EP4-203ENST00000578516 SND1-IT1Q9HBX3 110 aa13.43□□□□□ -0.26
CDC42EP4-203ENST00000578516 SMIM13P0DJ93 91 aa13.42□□□□□ -0.26
CDC42EP4-203ENST00000578516 PSORS1C2Q9UIG4 136 aa13.42□□□□□ -0.26
CDC42EP4-203ENST00000578516 J3QQQ9 107 aa13.41□□□□□ -0.26
CDC42EP4-203ENST00000578516 HERVK_113P61574 105 aa13.41□□□□□ -0.26
CDC42EP4-203ENST00000578516 PLEKHB2Q96CS7 222 aa13.41□□□□□ -0.26
CDC42EP4-203ENST00000578516 HIST1H2BLQ99880 126 aa13.41□□□□□ -0.26
CDC42EP4-203ENST00000578516 LINC00158P58513 81 aa13.4□□□□□ -0.26
CDC42EP4-203ENST00000578516 ATOH7Q8N100 152 aa13.4□□□□□ -0.26
CDC42EP4-203ENST00000578516 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
CDC42EP4-203ENST00000578516 MEIG1Q5JSS6 88 aa13.39□□□□□ -0.27
CDC42EP4-203ENST00000578516 SNRPEP62304 92 aaKnown RBP13.38□□□□□ -0.27
CDC42EP4-203ENST00000578516 MYCBP2O75592 4640 aa13.38□□□□□ -0.27
CDC42EP4-203ENST00000578516 IGKV2D-26A0A0A0MRZ7 120 aa13.37□□□□□ -0.27
CDC42EP4-203ENST00000578516 GAGE10A6NGK3 116 aa13.37□□□□□ -0.27
CDC42EP4-203ENST00000578516 E9PLD3 99 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms