RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 C20orf78Q9BR46 151 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 ST20Q9HBF5 79 aa6□□□□□ -1.45
NPLOC4-220ENST00000576940 NXT2Q9NPJ8 142 aaKnown RBP6□□□□□ -1.45
NPLOC4-220ENST00000576940 LINC01549A6NIU2 74 aa5.99□□□□□ -1.45
NPLOC4-220ENST00000576940 D6R8Y8 96 aa5.99□□□□□ -1.45
NPLOC4-220ENST00000576940 LINC00614P0C842 121 aa5.99□□□□□ -1.45
NPLOC4-220ENST00000576940 JOSD1Q15040 202 aaPredicted RBP5.99□□□□□ -1.45
NPLOC4-220ENST00000576940 GAGE2EQ4V326 116 aa5.99□□□□□ -1.45
NPLOC4-220ENST00000576940 NRACQ8N912 160 aa5.99□□□□□ -1.45
NPLOC4-220ENST00000576940 GAGE2DQ9UEU5 116 aa5.99□□□□□ -1.45
NPLOC4-220ENST00000576940 NUPR1O60356 82 aa5.98□□□□□ -1.45
NPLOC4-220ENST00000576940 CKS2P33552 79 aa5.98□□□□□ -1.45
NPLOC4-220ENST00000576940 UBE2BP63146 152 aa5.98□□□□□ -1.45
NPLOC4-220ENST00000576940 MRPL35Q9NZE8 188 aaKnown RBP5.98□□□□□ -1.45
NPLOC4-220ENST00000576940 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
NPLOC4-220ENST00000576940 TRBV27A0A0K0K1C4 114 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 HSBP1O75506 76 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 TNFRSF6BO95407 300 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 FABP4P15090 132 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 AKR1D1P51857 326 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 PYY3Q5JQD4 70 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 UNQ6190/PRO20217Q6UXQ8 127 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 MAP1LC3AQ9H492 121 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 C6orf48Q9UBA6 75 aa5.97□□□□□ -1.45
NPLOC4-220ENST00000576940 TCAPO15273 167 aa5.96□□□□□ -1.46
NPLOC4-220ENST00000576940 NPYP01303 97 aa5.96□□□□□ -1.46
NPLOC4-220ENST00000576940 TLX1NBP0CAT3 122 aa5.96□□□□□ -1.46
NPLOC4-220ENST00000576940 Q8N8P6 123 aa5.96□□□□□ -1.46
NPLOC4-220ENST00000576940 OR10D4PQ8NGN7 298 aa5.96□□□□□ -1.46
NPLOC4-220ENST00000576940 ORAOV1Q8WV07 137 aa5.96□□□□□ -1.46
NPLOC4-220ENST00000576940 CSDC2Q9Y534 153 aaKnown RBP5.96□□□□□ -1.46
NPLOC4-220ENST00000576940 SMKR1H3BMG3 65 aa5.95□□□□□ -1.46
NPLOC4-220ENST00000576940 M0QXV9 152 aa5.95□□□□□ -1.46
NPLOC4-220ENST00000576940 VCYO14598 125 aa5.95□□□□□ -1.46
NPLOC4-220ENST00000576940 NDUFA1O15239 70 aa5.95□□□□□ -1.46
NPLOC4-220ENST00000576940 ZNF861PO60384 105 aa5.95□□□□□ -1.46
NPLOC4-220ENST00000576940 Q6ZUT4 128 aa5.95□□□□□ -1.46
NPLOC4-220ENST00000576940 SMIM2Q9BVW6 85 aa5.95□□□□□ -1.46
NPLOC4-220ENST00000576940 A0A087X002 238 aa5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 A0A096LNJ9 63 aa5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 G0S2P27469 103 aa5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 FCER1GP30273 86 aa5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 SUMO2P61956 95 aaKnown RBP5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 FA2HQ7L5A8 372 aa5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 C12orf57Q99622 126 aa5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 RETNLBQ9BQ08 111 aa5.94□□□□□ -1.46
NPLOC4-220ENST00000576940 IGHV3OR16-9A0A0B4J2B5 98 aa5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 HBDP02042 147 aa5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 IFI27P40305 119 aaPredicted RBP5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 ORMDL2Q53FV1 153 aa5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 PDZD11Q5EBL8 140 aa5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 C9orf129Q5T035 196 aaKnown RBP5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 FAM104AQ969W3 186 aa5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 HSPB8Q9UJY1 196 aa5.93□□□□□ -1.46
NPLOC4-220ENST00000576940 F8WDY8 70 aa5.92□□□□□ -1.46
NPLOC4-220ENST00000576940 LEPROTL1O95214 131 aa5.92□□□□□ -1.46
NPLOC4-220ENST00000576940 NPSP0C0P6 89 aa5.92□□□□□ -1.46
NPLOC4-220ENST00000576940 S100A12P80511 92 aa5.92□□□□□ -1.46
NPLOC4-220ENST00000576940 PET117Q6UWS5 81 aa5.92□□□□□ -1.46
NPLOC4-220ENST00000576940 TEX43Q6ZNM6 134 aa5.92□□□□□ -1.46
NPLOC4-220ENST00000576940 TYMSOSQ8TAI1 123 aa5.92□□□□□ -1.46
NPLOC4-220ENST00000576940 SMAGPQ0VAQ4 97 aa5.91□□□□□ -1.46
NPLOC4-220ENST00000576940 KIAA0087Q14695 138 aa5.91□□□□□ -1.46
NPLOC4-220ENST00000576940 PMCHL1Q16048 86 aa5.91□□□□□ -1.46
NPLOC4-220ENST00000576940 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
NPLOC4-220ENST00000576940 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
NPLOC4-220ENST00000576940 SYS1-DBNDD2H3BUS1 97 aa5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 C3orf79P0CE67 100 aa5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 RPL39P62891 51 aaKnown RBP5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 LINC01545Q5VT33 79 aa5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 C2orf82Q6UX34 121 aa5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 FAM19A2Q8N3H0 131 aa5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 KIR2DL4Q99706 377 aa5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 TIMM21Q9BVV7 248 aa5.9□□□□□ -1.46
NPLOC4-220ENST00000576940 C20orf202A1L168 122 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 NDUFC2-KCTD14E9PQ53 114 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 ATP5LO75964 103 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 CRYGAP11844 174 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 TOMM6Q96B49 74 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 MAP1LC3CQ9BXW4 147 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 C22orf24Q9Y442 160 aa5.89□□□□□ -1.47
NPLOC4-220ENST00000576940 TRAV12-1A0A0B4J245 112 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 TRBV30A0A0K0K1B3 111 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 KRTAP13-2Q52LG2 175 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 LINC00242Q5T6M2 205 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 LINC00469Q8N7U9 141 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 IFI27L1Q96BM0 104 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 TIMM17AQ99595 171 aa5.87□□□□□ -1.47
NPLOC4-220ENST00000576940 IGLV7-46A0A075B6I9 117 aa5.86□□□□□ -1.47
NPLOC4-220ENST00000576940 KRTDAPP60985 99 aa5.86□□□□□ -1.47
NPLOC4-220ENST00000576940 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
NPLOC4-220ENST00000576940 ERASQ7Z444 233 aa5.86□□□□□ -1.47
NPLOC4-220ENST00000576940 PYGO1Q9Y3Y4 419 aa5.86□□□□□ -1.47
NPLOC4-220ENST00000576940 IGIPA6NJ69 53 aa5.85□□□□□ -1.47
NPLOC4-220ENST00000576940 SCGB1D1O95968 90 aa5.85□□□□□ -1.47
NPLOC4-220ENST00000576940 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
NPLOC4-220ENST00000576940 LINC00173Q6ZV60 143 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms