RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 SCXQ7RTU7 201 aa10.41□□□□□ -0.74
PFN1-203ENST00000574872 Q8IZM0 81 aa10.41□□□□□ -0.74
PFN1-203ENST00000574872 C6orf48Q9UBA6 75 aa10.41□□□□□ -0.74
PFN1-203ENST00000574872 F8WDY8 70 aa10.4□□□□□ -0.74
PFN1-203ENST00000574872 CKS1BP61024 79 aa10.4□□□□□ -0.74
PFN1-203ENST00000574872 COX7B2Q8TF08 81 aa10.4□□□□□ -0.74
PFN1-203ENST00000574872 PMCHL2Q9BQD1 86 aa10.4□□□□□ -0.74
PFN1-203ENST00000574872 MAP1LC3CQ9BXW4 147 aa10.4□□□□□ -0.74
PFN1-203ENST00000574872 A0A096LNI7 61 aa10.39□□□□□ -0.75
PFN1-203ENST00000574872 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
PFN1-203ENST00000574872 GAGE2BQ13066 116 aa10.38□□□□□ -0.75
PFN1-203ENST00000574872 CIRBP-AS1Q8TBR5 109 aa10.38□□□□□ -0.75
PFN1-203ENST00000574872 DPH3Q96FX2 82 aa10.38□□□□□ -0.75
PFN1-203ENST00000574872 IGLV5-39A0A0G2JS06 123 aa10.37□□□□□ -0.75
PFN1-203ENST00000574872 LOC107984640A0A0U1RRK4 108 aa10.37□□□□□ -0.75
PFN1-203ENST00000574872 SMR3BP02814 79 aaPredicted RBP10.37□□□□□ -0.75
PFN1-203ENST00000574872 MAJINQ3KP22 176 aa10.37□□□□□ -0.75
PFN1-203ENST00000574872 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
PFN1-203ENST00000574872 SPACA4Q8TDM5 124 aa10.37□□□□□ -0.75
PFN1-203ENST00000574872 TRBV30A0A0K0K1B3 111 aa10.36□□□□□ -0.75
PFN1-203ENST00000574872 RNF151Q2KHN1 245 aa10.36□□□□□ -0.75
PFN1-203ENST00000574872 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
PFN1-203ENST00000574872 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
PFN1-203ENST00000574872 TMEM223A0PJW6 202 aa10.35□□□□□ -0.75
PFN1-203ENST00000574872 SYS1-DBNDD2H3BUS1 97 aa10.35□□□□□ -0.75
PFN1-203ENST00000574872 CXCL5P42830 114 aa10.35□□□□□ -0.75
PFN1-203ENST00000574872 FAT1Q14517 4588 aa10.34□□□□□ -0.75
PFN1-203ENST00000574872 DPM2O94777 84 aa10.34□□□□□ -0.75
PFN1-203ENST00000574872 S100A6P06703 90 aa10.34□□□□□ -0.75
PFN1-203ENST00000574872 PLNP26678 52 aa10.34□□□□□ -0.75
PFN1-203ENST00000574872 PTTG1IPP53801 180 aa10.34□□□□□ -0.75
PFN1-203ENST00000574872 CIRBPQ14011 172 aaKnown RBP10.34□□□□□ -0.75
PFN1-203ENST00000574872 A0A087WYN8 130 aa10.33□□□□□ -0.76
PFN1-203ENST00000574872 KRTDAPP60985 99 aa10.33□□□□□ -0.76
PFN1-203ENST00000574872 IGKCP01834 107 aa10.32□□□□□ -0.76
PFN1-203ENST00000574872 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
PFN1-203ENST00000574872 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
PFN1-203ENST00000574872 Q6ZRP5 223 aa10.32□□□□□ -0.76
PFN1-203ENST00000574872 HIST3H2BBQ8N257 126 aa10.32□□□□□ -0.76
PFN1-203ENST00000574872 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
PFN1-203ENST00000574872 TLX1NBP0CAT3 122 aa10.31□□□□□ -0.76
PFN1-203ENST00000574872 STPG4Q8N801 248 aa10.31□□□□□ -0.76
PFN1-203ENST00000574872 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
PFN1-203ENST00000574872 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
PFN1-203ENST00000574872 S100A2P29034 98 aa10.3□□□□□ -0.76
PFN1-203ENST00000574872 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
PFN1-203ENST00000574872 Q8N1X5 172 aa10.3□□□□□ -0.76
PFN1-203ENST00000574872 LINC01545Q5VT33 79 aa10.29□□□□□ -0.76
PFN1-203ENST00000574872 SNRPEP62304 92 aaKnown RBP10.28□□□□□ -0.76
PFN1-203ENST00000574872 LINC00528Q8N1L1 170 aa10.28□□□□□ -0.76
PFN1-203ENST00000574872 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
PFN1-203ENST00000574872 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
PFN1-203ENST00000574872 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
PFN1-203ENST00000574872 HERVK_113P61574 105 aa10.27□□□□□ -0.77
PFN1-203ENST00000574872 Q5VSD8 79 aa10.27□□□□□ -0.77
PFN1-203ENST00000574872 KRTAP4-5Q9BYR2 181 aa10.27□□□□□ -0.77
PFN1-203ENST00000574872 A0A1W2PNN7 141 aa10.26□□□□□ -0.77
PFN1-203ENST00000574872 TSPEAR-AS2P59090 65 aa10.26□□□□□ -0.77
PFN1-203ENST00000574872 FAM168BA1KXE4 195 aa10.25□□□□□ -0.77
PFN1-203ENST00000574872 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
PFN1-203ENST00000574872 PFN2P35080 140 aa10.25□□□□□ -0.77
PFN1-203ENST00000574872 XAGE1AQ9HD64 81 aa10.25□□□□□ -0.77
PFN1-203ENST00000574872 C20orf202A1L168 122 aa10.24□□□□□ -0.77
PFN1-203ENST00000574872 FAM229AH3BQW9 127 aa10.24□□□□□ -0.77
PFN1-203ENST00000574872 LEPROTO15243 131 aa10.24□□□□□ -0.77
PFN1-203ENST00000574872 C9orf129Q5T035 196 aaKnown RBP10.24□□□□□ -0.77
PFN1-203ENST00000574872 ABCA13Q86UQ4 5058 aa10.24□□□□□ -0.77
PFN1-203ENST00000574872 C5orf52A6NGY3 159 aa10.23□□□□□ -0.77
PFN1-203ENST00000574872 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
PFN1-203ENST00000574872 PLEKHB2Q96CS7 222 aa10.23□□□□□ -0.77
PFN1-203ENST00000574872 NDUFA12Q9UI09 145 aa10.23□□□□□ -0.77
PFN1-203ENST00000574872 ERG28Q9UKR5 140 aa10.23□□□□□ -0.77
PFN1-203ENST00000574872 J3QQQ9 107 aa10.22□□□□□ -0.77
PFN1-203ENST00000574872 SFTA2Q6UW10 78 aa10.22□□□□□ -0.77
PFN1-203ENST00000574872 ATOH7Q8N100 152 aa10.22□□□□□ -0.77
PFN1-203ENST00000574872 VPS13BQ7Z7G8 4022 aa10.21□□□□□ -0.77
PFN1-203ENST00000574872 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.77
PFN1-203ENST00000574872 A0A0U1RRA0 63 aa10.2□□□□□ -0.78
PFN1-203ENST00000574872 E9PLD3 99 aa10.2□□□□□ -0.78
PFN1-203ENST00000574872 TMA7Q9Y2S6 64 aaKnown RBP10.2□□□□□ -0.78
PFN1-203ENST00000574872 MYMXA0A1B0GTQ4 84 aa10.19□□□□□ -0.78
PFN1-203ENST00000574872 LINC00158P58513 81 aa10.19□□□□□ -0.78
PFN1-203ENST00000574872 RPL37AP61513 92 aaKnown RBP10.19□□□□□ -0.78
PFN1-203ENST00000574872 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
PFN1-203ENST00000574872 PHF5AQ7RTV0 110 aaKnown RBP10.19□□□□□ -0.78
PFN1-203ENST00000574872 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
PFN1-203ENST00000574872 PLA2G1BP04054 148 aaKnown RBP10.18□□□□□ -0.78
PFN1-203ENST00000574872 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
PFN1-203ENST00000574872 KRTAP7-1Q8IUC3 87 aa10.18□□□□□ -0.78
PFN1-203ENST00000574872 SMIM13P0DJ93 91 aa10.17□□□□□ -0.78
PFN1-203ENST00000574872 HERV-K104P63124 156 aa10.17□□□□□ -0.78
PFN1-203ENST00000574872 COX17Q14061 63 aa10.17□□□□□ -0.78
PFN1-203ENST00000574872 IGKV2D-26A0A0A0MRZ7 120 aa10.16□□□□□ -0.78
PFN1-203ENST00000574872 M0QXV9 152 aa10.16□□□□□ -0.78
PFN1-203ENST00000574872 SND1-IT1Q9HBX3 110 aa10.16□□□□□ -0.78
PFN1-203ENST00000574872 NMUP48645 174 aa10.15□□□□□ -0.78
PFN1-203ENST00000574872 SRRM2Q9UQ35 2752 aaKnown RBP10.14□□□□□ -0.79
PFN1-203ENST00000574872 ANKRD39Q53RE8 183 aa10.14□□□□□ -0.79
PFN1-203ENST00000574872 PCLOQ9Y6V0 5065 aa10.14□□□□□ -0.79
PFN1-203ENST00000574872 KRTAP10-4P60372 401 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms