RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 USP9XQ93008 2570 aaPredicted RBP10.05□□□□□ -0.8
SMG6-215ENST00000574501 GNLYP22749 145 aa10.05□□□□□ -0.8
SMG6-215ENST00000574501 ZNF702PQ9H963 129 aa10.05□□□□□ -0.8
SMG6-215ENST00000574501 USP9YO00507 2555 aaPredicted RBP10.05□□□□□ -0.8
SMG6-215ENST00000574501 MYO9AB2RTY4 2548 aa10.05□□□□□ -0.8
SMG6-215ENST00000574501 WNK1Q9H4A3 2382 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 A0A087WZ39 114 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 B4DSR2 109 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 TMEM256-PLSCR3K7ERE1 68 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 NANOS2P60321 138 aaKnown RBP10.04□□□□□ -0.8
SMG6-215ENST00000574501 LYPD5Q6UWN5 251 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 DEFB114Q30KQ6 69 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 LINC00167Q96N53 147 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 LRRK2Q5S007 2527 aa10.04□□□□□ -0.8
SMG6-215ENST00000574501 H7BZZ5 65 aa10.03□□□□□ -0.8
SMG6-215ENST00000574501 ODF3L2Q3SX64 289 aa10.03□□□□□ -0.8
SMG6-215ENST00000574501 MAPK1IP1LQ8NDC0 245 aa10.03□□□□□ -0.8
SMG6-215ENST00000574501 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
SMG6-215ENST00000574501 LINC00336Q6ZUF6 198 aa10.02□□□□□ -0.81
SMG6-215ENST00000574501 SNURFQ9Y675 71 aa10.02□□□□□ -0.81
SMG6-215ENST00000574501 JMJD1CQ15652 2540 aa10.02□□□□□ -0.81
SMG6-215ENST00000574501 PLA2G2AP14555 144 aa10.02□□□□□ -0.81
SMG6-215ENST00000574501 TMEM86BQ8N661 226 aa10.01□□□□□ -0.81
SMG6-215ENST00000574501 M0R2N4 97 aa10□□□□□ -0.81
SMG6-215ENST00000574501 MRAPQ8TCY5 172 aa10□□□□□ -0.81
SMG6-215ENST00000574501 SERP1Q9Y6X1 66 aa10□□□□□ -0.81
SMG6-215ENST00000574501 TRAV10A0A0B4J240 114 aa9.99□□□□□ -0.81
SMG6-215ENST00000574501 TRBV6-8A0A0A6YYG3 113 aa9.99□□□□□ -0.81
SMG6-215ENST00000574501 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
SMG6-215ENST00000574501 HAMPP81172 84 aa9.99□□□□□ -0.81
SMG6-215ENST00000574501 RMI2Q96E14 147 aa9.99□□□□□ -0.81
SMG6-215ENST00000574501 DOPEY1Q5JWR5 2465 aa9.99□□□□□ -0.81
SMG6-215ENST00000574501 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
SMG6-215ENST00000574501 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
SMG6-215ENST00000574501 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
SMG6-215ENST00000574501 TLN2Q9Y4G6 2542 aa9.98□□□□□ -0.81
SMG6-215ENST00000574501 TRAV7A0A075B6U4 112 aa9.98□□□□□ -0.81
SMG6-215ENST00000574501 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
SMG6-215ENST00000574501 SETXQ7Z333 2677 aaKnown RBP9.97□□□□□ -0.81
SMG6-215ENST00000574501 EPM2AB3EWF7 344 aa9.97□□□□□ -0.81
SMG6-215ENST00000574501 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
SMG6-215ENST00000574501 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
SMG6-215ENST00000574501 LINC01547P58512 204 aaPredicted RBP9.96□□□□□ -0.81
SMG6-215ENST00000574501 RBM3P98179 157 aaKnown RBP9.96□□□□□ -0.82
SMG6-215ENST00000574501 Q6ZQT0 140 aa9.96□□□□□ -0.82
SMG6-215ENST00000574501 POLQO75417 2590 aa9.96□□□□□ -0.82
SMG6-215ENST00000574501 CENPEQ02224 2701 aa9.95□□□□□ -0.82
SMG6-215ENST00000574501 F8WEM9 126 aa9.95□□□□□ -0.82
SMG6-215ENST00000574501 LAMTOR3Q9UHA4 124 aa9.95□□□□□ -0.82
SMG6-215ENST00000574501 PRO0628Q9UI54 55 aa9.95□□□□□ -0.82
SMG6-215ENST00000574501 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
SMG6-215ENST00000574501 C9orf116Q5BN46 136 aaPredicted RBP9.94□□□□□ -0.82
SMG6-215ENST00000574501 NF1P21359 2839 aa9.94□□□□□ -0.82
SMG6-215ENST00000574501 FP248Q71RG6 208 aaPredicted RBP9.94□□□□□ -0.82
SMG6-215ENST00000574501 Q8NDZ9 215 aa9.94□□□□□ -0.82
SMG6-215ENST00000574501 FASNP49327 2511 aaKnown RBP9.93□□□□□ -0.82
SMG6-215ENST00000574501 KLKP1Q107X0 134 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 Q6YL49 198 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 Q6ZVQ6 151 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 LINC00482Q8N8I6 264 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 C11orf44Q8N8P7 122 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 WFDC11Q8NEX6 87 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 SPATA3Q8NHX4 192 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 C1orf43Q9BWL3 253 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 TEX15Q9BXT5 2789 aa9.93□□□□□ -0.82
SMG6-215ENST00000574501 Q8IZM0 81 aa9.92□□□□□ -0.82
SMG6-215ENST00000574501 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
SMG6-215ENST00000574501 C16orf95Q9H693 158 aa9.92□□□□□ -0.82
SMG6-215ENST00000574501 GIG44P09565 113 aaPredicted RBP9.92□□□□□ -0.82
SMG6-215ENST00000574501 LINC00474Q9P2X8 69 aa9.92□□□□□ -0.82
SMG6-215ENST00000574501 LINC00575Q6W349 94 aa9.91□□□□□ -0.82
SMG6-215ENST00000574501 A0A1W2PRX2 142 aa9.91□□□□□ -0.82
SMG6-215ENST00000574501 RPL35AP18077 110 aaKnown RBP9.91□□□□□ -0.82
SMG6-215ENST00000574501 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
SMG6-215ENST00000574501 TENM4Q6N022 2769 aa9.9□□□□□ -0.82
SMG6-215ENST00000574501 C16orf74Q96GX8 76 aa9.9□□□□□ -0.82
SMG6-215ENST00000574501 PKIGQ9Y2B9 76 aa9.9□□□□□ -0.82
SMG6-215ENST00000574501 TM2D3Q9BRN9 247 aa9.9□□□□□ -0.83
SMG6-215ENST00000574501 SETD2Q9BYW2 2564 aaPredicted RBP9.89□□□□□ -0.83
SMG6-215ENST00000574501 J3QLI3 93 aa9.89□□□□□ -0.83
SMG6-215ENST00000574501 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
SMG6-215ENST00000574501 Q8N3U1 123 aa9.88□□□□□ -0.83
SMG6-215ENST00000574501 ANKRD17O75179 2603 aaKnown RBP9.88□□□□□ -0.83
SMG6-215ENST00000574501 NBEAL2Q6ZNJ1 2754 aa9.88□□□□□ -0.83
SMG6-215ENST00000574501 LOC110117498A0A087WWA1 95 aa9.88□□□□□ -0.83
SMG6-215ENST00000574501 SMIM26A0A096LP01 95 aa9.88□□□□□ -0.83
SMG6-215ENST00000574501 A0A096LPF7 62 aa9.88□□□□□ -0.83
SMG6-215ENST00000574501 BCE1O60756 84 aa9.88□□□□□ -0.83
SMG6-215ENST00000574501 LINC00269Q8N2A0 174 aa9.88□□□□□ -0.83
SMG6-215ENST00000574501 TRBV7-6A0A0J9YX20 115 aa9.87□□□□□ -0.83
SMG6-215ENST00000574501 GCN1Q92616 2671 aaKnown RBP9.87□□□□□ -0.83
SMG6-215ENST00000574501 IGLV10-54A0A075B6I4 117 aa9.86□□□□□ -0.83
SMG6-215ENST00000574501 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
SMG6-215ENST00000574501 APCP25054 2843 aa9.86□□□□□ -0.83
SMG6-215ENST00000574501 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
SMG6-215ENST00000574501 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
SMG6-215ENST00000574501 KIAA0087Q14695 138 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms