RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 ZFHX2Q9C0A1 2572 aaPredicted RBP1.8□□□□□ -2.12
TVP23B-205ENST00000572845 IGKV3OR2-268A0A0C4DH90 116 aa1.8□□□□□ -2.12
TVP23B-205ENST00000572845 J3QRE1 110 aa1.8□□□□□ -2.12
TVP23B-205ENST00000572845 M0R135 149 aa1.8□□□□□ -2.12
TVP23B-205ENST00000572845 IGLV3-1P01715 115 aa1.8□□□□□ -2.12
TVP23B-205ENST00000572845 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
TVP23B-205ENST00000572845 R4GN34 69 aa1.8□□□□□ -2.12
TVP23B-205ENST00000572845 DNAJC13O75165 2243 aa1.8□□□□□ -2.12
TVP23B-205ENST00000572845 PRRC2BQ5JSZ5 2229 aaKnown RBP1.8□□□□□ -2.12
TVP23B-205ENST00000572845 LINC01558Q9Y6Z2 57 aa1.79□□□□□ -2.12
TVP23B-205ENST00000572845 R4GMQ9 66 aa1.79□□□□□ -2.12
TVP23B-205ENST00000572845 DDX60Q8IY21 1712 aaKnown RBP1.79□□□□□ -2.12
TVP23B-205ENST00000572845 RP1P56715 2156 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 INTS1Q8N201 2190 aaKnown RBP1.78□□□□□ -2.12
TVP23B-205ENST00000572845 COL5A1P20908 1838 aaPredicted RBP1.78□□□□□ -2.12
TVP23B-205ENST00000572845 TRAV21A0A0B4J279 112 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 CTXND1A0A1B0GTU2 59 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 SPINK7P58062 85 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 Q6ZTI0 123 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 TMEM263Q8WUH6 116 aaKnown RBP1.78□□□□□ -2.12
TVP23B-205ENST00000572845 LINC00208Q96KT6 92 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 TXNDC17Q9BRA2 123 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 LINC00846Q9NV44 126 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 V9GYV3 84 aa1.78□□□□□ -2.12
TVP23B-205ENST00000572845 ABCA4P78363 2273 aa1.78□□□□□ -2.13
TVP23B-205ENST00000572845 CEP192Q8TEP8 1941 aa1.78□□□□□ -2.13
TVP23B-205ENST00000572845 TOGARAM1Q9Y4F4 1720 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 DUOX1Q9NRD9 1551 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 UNC13CQ8NB66 2214 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 TRBV6-4A0A1B0GX49 114 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 SMIM27A0A1W2PRY6 76 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 H0Y9P7 68 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 UQCR11O14957 56 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 PDE6GP18545 87 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 ZNF137PP52743 207 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 SNRPGP62308 76 aaKnown RBP1.77□□□□□ -2.13
TVP23B-205ENST00000572845 ENHOQ6UWT2 76 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 C4orf3Q8WVX3 66 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 PSORS1C2Q9UIG4 136 aa1.77□□□□□ -2.13
TVP23B-205ENST00000572845 SPAG17Q6Q759 2223 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 ARFGEF3Q5TH69 2177 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 A0A087WTM6 91 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 TRAV1-2A0A0B4J238 106 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 NDUFB1O75438 58 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 MGPP08493 103 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 RPL37AP61513 92 aaKnown RBP1.76□□□□□ -2.13
TVP23B-205ENST00000572845 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 HCP5Q6MZN7 132 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 SPINT4Q6UDR6 99 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 LINC00322Q6ZN03 302 aaPredicted RBP1.76□□□□□ -2.13
TVP23B-205ENST00000572845 WFDC9Q8NEX5 89 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 CCL26Q9Y258 94 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 PRR14LQ5THK1 2151 aa1.76□□□□□ -2.13
TVP23B-205ENST00000572845 SDK1Q7Z5N4 2213 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 C4AP0C0L4 1744 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 LCE6AA0A183 80 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 RNASE3P12724 160 aaKnown RBP1.75□□□□□ -2.13
TVP23B-205ENST00000572845 HRES1P13985 223 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 PLNP26678 52 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 C10orf113Q5VZT2 155 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
TVP23B-205ENST00000572845 ZCCHC13Q8WW36 166 aaKnown RBP1.75□□□□□ -2.13
TVP23B-205ENST00000572845 DOCK10Q96BY6 2186 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 TRBV6-1A0A0K0K1D8 114 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
TVP23B-205ENST00000572845 IGLV3-19P01714 112 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 IL9P15248 144 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 SERF2P84101 59 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 FXYD3Q14802 87 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 LY6EQ16553 131 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 Q8N9L7 120 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 SPRR4Q96PI1 79 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 WFDC6Q9BQY6 131 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 UBL5Q9BZL1 73 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 WFDC10AQ9H1F0 79 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 KLK9Q9UKQ9 250 aa1.74□□□□□ -2.13
TVP23B-205ENST00000572845 IGKV2-40A0A087WW87 121 aaPredicted RBP1.73□□□□□ -2.13
TVP23B-205ENST00000572845 TRGV4A0A0C4DH28 118 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 A0A1W2PNN7 141 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 M0R1W7 72 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 SPINK4O60575 86 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 IGKV2D-40P01614 121 aaPredicted RBP1.73□□□□□ -2.13
TVP23B-205ENST00000572845 SPATA8Q6RVD6 105 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 DEFB132Q7Z7B7 95 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 C5orf56Q8N8D9 126 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 LINC00304Q8N9R0 145 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 GAFA1Q96PS6 74 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 TIMM8BQ9Y5J9 83 aaPredicted RBP1.73□□□□□ -2.13
TVP23B-205ENST00000572845 LMO7Q8WWI1 1683 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 BRWD1Q9NSI6 2320 aa1.73□□□□□ -2.13
TVP23B-205ENST00000572845 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.72□□□□□ -2.13
TVP23B-205ENST00000572845 ARL14EPLP0DKL9 152 aa1.72□□□□□ -2.13
TVP23B-205ENST00000572845 DEFB112Q30KQ8 113 aa1.72□□□□□ -2.13
TVP23B-205ENST00000572845 DEFB134Q4QY38 66 aa1.72□□□□□ -2.13
TVP23B-205ENST00000572845 C10orf55Q5SWW7 151 aa1.72□□□□□ -2.13
TVP23B-205ENST00000572845 PLXNB2O15031 1838 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms