RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PAPPA-AS1Q5QFB9 102 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 LINC00469Q8N7U9 141 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 GEMIN7Q9H840 131 aaKnown RBP4.41□□□□□ -1.7
SMG6-209ENST00000571442 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
SMG6-209ENST00000571442 A0A1W2PNN7 141 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 LINC01549A6NIU2 74 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 HSBP1O75506 76 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 ATP5LO75964 103 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 PTTG1IPP53801 180 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 GAGE2BQ13066 116 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 MAJINQ3KP22 176 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 IFI27L1Q96BM0 104 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
SMG6-209ENST00000571442 TOMM7Q9P0U1 55 aa4.4□□□□□ -1.71
SMG6-209ENST00000571442 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.71
SMG6-209ENST00000571442 NDUFA1O15239 70 aa4.39□□□□□ -1.71
SMG6-209ENST00000571442 HNRNPA3P51991 378 aaKnown RBP4.39□□□□□ -1.71
SMG6-209ENST00000571442 SEC11AP67812 179 aa4.39□□□□□ -1.71
SMG6-209ENST00000571442 Q6ZRP5 223 aa4.39□□□□□ -1.71
SMG6-209ENST00000571442 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
SMG6-209ENST00000571442 Q8IZM0 81 aa4.39□□□□□ -1.71
SMG6-209ENST00000571442 PLAC8Q9NZF1 115 aa4.39□□□□□ -1.71
SMG6-209ENST00000571442 SRRM2Q9UQ35 2752 aaKnown RBP4.39□□□□□ -1.71
SMG6-209ENST00000571442 TRAV12-1A0A0B4J245 112 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 IGLV5-39A0A0G2JS06 123 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 LOC107984640A0A0U1RRK4 108 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 FAM168BA1KXE4 195 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 FAM229AH3BQW9 127 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 TLX1NBP0CAT3 122 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 FABP4P15090 132 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 RPL18AQ02543 176 aaKnown RBP4.38□□□□□ -1.71
SMG6-209ENST00000571442 ODF1Q14990 250 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 RNF151Q2KHN1 245 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 STPG4Q8N801 248 aa4.38□□□□□ -1.71
SMG6-209ENST00000571442 PACRGQ96M98 296 aaPredicted RBP4.38□□□□□ -1.71
SMG6-209ENST00000571442 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
SMG6-209ENST00000571442 TRBV30A0A0K0K1B3 111 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 F8WDY8 70 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 H0Y8G0 127 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 LEPROTL1O95214 131 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 S100A1P23297 94 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 GAGE2EQ4V326 116 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 C9orf129Q5T035 196 aaKnown RBP4.37□□□□□ -1.71
SMG6-209ENST00000571442 KRTAP11-1Q8IUC1 163 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 COX7B2Q8TF08 81 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 DPH3Q96FX2 82 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 PMCHL2Q9BQD1 86 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 GAGE2DQ9UEU5 116 aa4.37□□□□□ -1.71
SMG6-209ENST00000571442 TMEM223A0PJW6 202 aa4.36□□□□□ -1.71
SMG6-209ENST00000571442 F8VRH5 84 aa4.36□□□□□ -1.71
SMG6-209ENST00000571442 PRSS2P07478 247 aa4.36□□□□□ -1.71
SMG6-209ENST00000571442 TMEM170BQ5T4T1 132 aa4.36□□□□□ -1.71
SMG6-209ENST00000571442 NDUFC2-KCTD14E9PQ53 114 aa4.35□□□□□ -1.71
SMG6-209ENST00000571442 J3QL48 77 aa4.35□□□□□ -1.71
SMG6-209ENST00000571442 CKS1BP61024 79 aa4.35□□□□□ -1.71
SMG6-209ENST00000571442 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
SMG6-209ENST00000571442 COA6Q5JTJ3 125 aaKnown RBP4.35□□□□□ -1.71
SMG6-209ENST00000571442 PHF5AQ7RTV0 110 aaKnown RBP4.35□□□□□ -1.71
SMG6-209ENST00000571442 H3BRM9 83 aa4.34□□□□□ -1.71
SMG6-209ENST00000571442 TSPEAR-AS2P59090 65 aa4.34□□□□□ -1.71
SMG6-209ENST00000571442 SERTAD4-AS1Q5TG53 156 aa4.34□□□□□ -1.71
SMG6-209ENST00000571442 ZNF625Q96I27 306 aaPredicted RBP4.34□□□□□ -1.71
SMG6-209ENST00000571442 XAGE1AQ9HD64 81 aa4.34□□□□□ -1.71
SMG6-209ENST00000571442 HSPB8Q9UJY1 196 aa4.34□□□□□ -1.71
SMG6-209ENST00000571442 PLA2G1BP04054 148 aaKnown RBP4.33□□□□□ -1.72
SMG6-209ENST00000571442 CXCL5P42830 114 aa4.33□□□□□ -1.72
SMG6-209ENST00000571442 PRR3P79522 188 aaKnown RBP4.33□□□□□ -1.72
SMG6-209ENST00000571442 FAM19A5Q7Z5A7 132 aaPredicted RBP4.33□□□□□ -1.72
SMG6-209ENST00000571442 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
SMG6-209ENST00000571442 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
SMG6-209ENST00000571442 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
SMG6-209ENST00000571442 Q8NDZ9 215 aa4.32□□□□□ -1.72
SMG6-209ENST00000571442 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
SMG6-209ENST00000571442 DPM2O94777 84 aa4.31□□□□□ -1.72
SMG6-209ENST00000571442 IGKCP01834 107 aa4.31□□□□□ -1.72
SMG6-209ENST00000571442 PFN2P35080 140 aa4.31□□□□□ -1.72
SMG6-209ENST00000571442 LINC01545Q5VT33 79 aa4.31□□□□□ -1.72
SMG6-209ENST00000571442 MAP1LC3CQ9BXW4 147 aa4.31□□□□□ -1.72
SMG6-209ENST00000571442 TNXBP22105 4242 aa4.31□□□□□ -1.72
SMG6-209ENST00000571442 A0A0U1RRA0 63 aa4.3□□□□□ -1.72
SMG6-209ENST00000571442 M0QXV9 152 aa4.3□□□□□ -1.72
SMG6-209ENST00000571442 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
SMG6-209ENST00000571442 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
SMG6-209ENST00000571442 PSORS1C2Q9UIG4 136 aa4.3□□□□□ -1.72
SMG6-209ENST00000571442 ERG28Q9UKR5 140 aa4.3□□□□□ -1.72
SMG6-209ENST00000571442 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
SMG6-209ENST00000571442 IGKV2D-26A0A0A0MRZ7 120 aa4.29□□□□□ -1.72
SMG6-209ENST00000571442 LEPROTO15243 131 aa4.29□□□□□ -1.72
SMG6-209ENST00000571442 SMIM13P0DJ93 91 aa4.29□□□□□ -1.72
SMG6-209ENST00000571442 PLNP26678 52 aa4.29□□□□□ -1.72
SMG6-209ENST00000571442 KRTDAPP60985 99 aa4.29□□□□□ -1.72
SMG6-209ENST00000571442 PET117Q6UWS5 81 aa4.29□□□□□ -1.72
SMG6-209ENST00000571442 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
SMG6-209ENST00000571442 J3QQQ9 107 aa4.28□□□□□ -1.72
SMG6-209ENST00000571442 SRSF9Q13242 221 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMG6-209ENST00000571442 HIST1H2BLQ99880 126 aa4.28□□□□□ -1.72
SMG6-209ENST00000571442 TTTY13Q9BZ97 58 aa4.28□□□□□ -1.72
SMG6-209ENST00000571442 NDUFA12Q9UI09 145 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms