RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
SMG6-207ENST00000570756 DEFB114Q30KQ6 69 aa10.84□□□□□ -0.67
SMG6-207ENST00000570756 MYO9AB2RTY4 2548 aa10.84□□□□□ -0.67
SMG6-207ENST00000570756 IGHV3OR16-9A0A0B4J2B5 98 aa10.84□□□□□ -0.67
SMG6-207ENST00000570756 IGKV3OR2-268A0A0C4DH90 116 aa10.84□□□□□ -0.67
SMG6-207ENST00000570756 A0A087WZ39 114 aa10.83□□□□□ -0.68
SMG6-207ENST00000570756 SS18Q15532 418 aa10.83□□□□□ -0.68
SMG6-207ENST00000570756 GHRHP01286 108 aa10.83□□□□□ -0.68
SMG6-207ENST00000570756 LINC01356Q8N9X3 169 aa10.83□□□□□ -0.68
SMG6-207ENST00000570756 LINC00167Q96N53 147 aa10.83□□□□□ -0.68
SMG6-207ENST00000570756 J3QLI3 93 aa10.82□□□□□ -0.68
SMG6-207ENST00000570756 FLNAP21333 2647 aaKnown RBP10.82□□□□□ -0.68
SMG6-207ENST00000570756 OXTP01178 125 aa10.82□□□□□ -0.68
SMG6-207ENST00000570756 TMEM86BQ8N661 226 aa10.82□□□□□ -0.68
SMG6-207ENST00000570756 C4orf3Q8WVX3 66 aa10.82□□□□□ -0.68
SMG6-207ENST00000570756 ACANP16112 2415 aa10.81□□□□□ -0.68
SMG6-207ENST00000570756 TMEM256-PLSCR3K7ERE1 68 aa10.81□□□□□ -0.68
SMG6-207ENST00000570756 DSCR9P59020 149 aa10.81□□□□□ -0.68
SMG6-207ENST00000570756 TRBV10-3A0A0K0K1G6 114 aa10.8□□□□□ -0.68
SMG6-207ENST00000570756 FHL2Q14192 279 aa10.8□□□□□ -0.68
SMG6-207ENST00000570756 ODF3L2Q3SX64 289 aa10.8□□□□□ -0.68
SMG6-207ENST00000570756 OTOGQ6ZRI0 2925 aa10.8□□□□□ -0.68
SMG6-207ENST00000570756 Q6YL49 198 aa10.8□□□□□ -0.68
SMG6-207ENST00000570756 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
SMG6-207ENST00000570756 KHDC1LQ5JSQ8 128 aa10.79□□□□□ -0.68
SMG6-207ENST00000570756 TRAV25A0A0B4J276 109 aa10.79□□□□□ -0.68
SMG6-207ENST00000570756 HILS1P60008 231 aa10.79□□□□□ -0.68
SMG6-207ENST00000570756 C6orf226Q5I0X4 101 aa10.79□□□□□ -0.68
SMG6-207ENST00000570756 LYPD5Q6UWN5 251 aa10.79□□□□□ -0.68
SMG6-207ENST00000570756 UBL5Q9BZL1 73 aa10.79□□□□□ -0.68
SMG6-207ENST00000570756 TRGV2A0A075B6R0 118 aa10.78□□□□□ -0.68
SMG6-207ENST00000570756 TRAV23DV6A0A075B6W5 121 aa10.78□□□□□ -0.68
SMG6-207ENST00000570756 Q8N814 137 aa10.78□□□□□ -0.68
SMG6-207ENST00000570756 IGLV4-60A0A075B6I1 120 aa10.78□□□□□ -0.68
SMG6-207ENST00000570756 TRBV6-8A0A0A6YYG3 113 aa10.77□□□□□ -0.69
SMG6-207ENST00000570756 Q5XG85 94 aa10.77□□□□□ -0.69
SMG6-207ENST00000570756 ENHOQ6UWT2 76 aa10.77□□□□□ -0.69
SMG6-207ENST00000570756 LOC100131303A0A0U1RQF7 123 aa10.76□□□□□ -0.69
SMG6-207ENST00000570756 C4orf26Q17RF5 130 aa10.76□□□□□ -0.69
SMG6-207ENST00000570756 C11orf44Q8N8P7 122 aa10.76□□□□□ -0.69
SMG6-207ENST00000570756 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
SMG6-207ENST00000570756 FAM19A1Q7Z5A9 133 aa10.75□□□□□ -0.69
SMG6-207ENST00000570756 WFDC9Q8NEX5 89 aa10.75□□□□□ -0.69
SMG6-207ENST00000570756 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
SMG6-207ENST00000570756 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
SMG6-207ENST00000570756 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
SMG6-207ENST00000570756 A0A1W2PRX2 142 aa10.74□□□□□ -0.69
SMG6-207ENST00000570756 BCE1O60756 84 aa10.74□□□□□ -0.69
SMG6-207ENST00000570756 HRCT1Q6UXD1 115 aa10.74□□□□□ -0.69
SMG6-207ENST00000570756 C20orf197Q8N268 126 aa10.74□□□□□ -0.69
SMG6-207ENST00000570756 FAM236DA0A1B0GTK5 79 aa10.73□□□□□ -0.69
SMG6-207ENST00000570756 LINC00959A0A1B0GUT2 108 aa10.73□□□□□ -0.69
SMG6-207ENST00000570756 FAM236CP0DP71 79 aa10.73□□□□□ -0.69
SMG6-207ENST00000570756 Q8IZM0 81 aa10.73□□□□□ -0.69
SMG6-207ENST00000570756 SONP18583 2426 aaKnown RBP10.72□□□□□ -0.69
SMG6-207ENST00000570756 MXRA5Q9NR99 2828 aa10.72□□□□□ -0.69
SMG6-207ENST00000570756 XCL1P47992 114 aa10.72□□□□□ -0.69
SMG6-207ENST00000570756 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
SMG6-207ENST00000570756 NANOS2P60321 138 aaKnown RBP10.71□□□□□ -0.69
SMG6-207ENST00000570756 FSHBP01225 129 aa10.7□□□□□ -0.7
SMG6-207ENST00000570756 TRAV7A0A075B6U4 112 aa10.69□□□□□ -0.7
SMG6-207ENST00000570756 A0A096LNT2 108 aa10.69□□□□□ -0.7
SMG6-207ENST00000570756 PLAC8L1A1L4L8 177 aa10.69□□□□□ -0.7
SMG6-207ENST00000570756 DEFB113Q30KQ7 82 aa10.68□□□□□ -0.7
SMG6-207ENST00000570756 SERP1Q9Y6X1 66 aa10.68□□□□□ -0.7
SMG6-207ENST00000570756 RNASE1P07998 156 aaKnown RBP10.68□□□□□ -0.7
SMG6-207ENST00000570756 COX17Q14061 63 aa10.68□□□□□ -0.7
SMG6-207ENST00000570756 MAST4O15021 2626 aa10.67□□□□□ -0.7
SMG6-207ENST00000570756 RBM3P98179 157 aaKnown RBP10.67□□□□□ -0.7
SMG6-207ENST00000570756 MRAPQ8TCY5 172 aa10.67□□□□□ -0.7
SMG6-207ENST00000570756 CMC4P56277 68 aaPredicted RBP10.67□□□□□ -0.7
SMG6-207ENST00000570756 MTORP42345 2549 aa10.66□□□□□ -0.7
SMG6-207ENST00000570756 HIVEP1P15822 2718 aa10.66□□□□□ -0.7
SMG6-207ENST00000570756 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
SMG6-207ENST00000570756 LOC110117498A0A087WWA1 95 aa10.66□□□□□ -0.7
SMG6-207ENST00000570756 Q6ZQT0 140 aa10.66□□□□□ -0.7
SMG6-207ENST00000570756 H7BZZ5 65 aa10.65□□□□□ -0.7
SMG6-207ENST00000570756 ZNF561-AS1K7EIQ3 104 aa10.65□□□□□ -0.7
SMG6-207ENST00000570756 KRTAP1-3Q8IUG1 177 aa10.65□□□□□ -0.7
SMG6-207ENST00000570756 WFDC11Q8NEX6 87 aa10.65□□□□□ -0.7
SMG6-207ENST00000570756 CUBNO60494 3623 aa10.65□□□□□ -0.7
SMG6-207ENST00000570756 EPM2AB3EWF7 344 aa10.65□□□□□ -0.71
SMG6-207ENST00000570756 GIG44P09565 113 aaPredicted RBP10.65□□□□□ -0.71
SMG6-207ENST00000570756 C6orf99Q4VX62 202 aa10.65□□□□□ -0.71
SMG6-207ENST00000570756 CR1P17927 2039 aa10.64□□□□□ -0.71
SMG6-207ENST00000570756 NOTCH3Q9UM47 2321 aa10.64□□□□□ -0.71
SMG6-207ENST00000570756 A0A1B0GUV1 79 aa10.64□□□□□ -0.71
SMG6-207ENST00000570756 KLKP1Q107X0 134 aa10.64□□□□□ -0.71
SMG6-207ENST00000570756 LINC00575Q6W349 94 aa10.64□□□□□ -0.71
SMG6-207ENST00000570756 LINC00482Q8N8I6 264 aa10.63□□□□□ -0.71
SMG6-207ENST00000570756 TEP1Q99973 2627 aaKnown RBP10.63□□□□□ -0.71
SMG6-207ENST00000570756 LINC01547P58512 204 aaPredicted RBP10.63□□□□□ -0.71
SMG6-207ENST00000570756 LAMTOR3Q9UHA4 124 aa10.63□□□□□ -0.71
SMG6-207ENST00000570756 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
SMG6-207ENST00000570756 C6orf223Q8N319 242 aa10.62□□□□□ -0.71
SMG6-207ENST00000570756 PDE6GP18545 87 aa10.61□□□□□ -0.71
SMG6-207ENST00000570756 NF1P21359 2839 aa10.61□□□□□ -0.71
SMG6-207ENST00000570756 H3BQ85 93 aa10.6□□□□□ -0.71
SMG6-207ENST00000570756 HAMPP81172 84 aa10.6□□□□□ -0.71
SMG6-207ENST00000570756 CCL24O00175 119 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms