RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 COX7A2LO14548 114 aa9.4□□□□□ -0.9
COMMD4-225ENST00000569245 HERVK_113P61574 105 aa9.4□□□□□ -0.9
COMMD4-225ENST00000569245 MAJINQ3KP22 176 aa9.4□□□□□ -0.9
COMMD4-225ENST00000569245 Q6ZSA8 131 aa9.4□□□□□ -0.9
COMMD4-225ENST00000569245 VAMP8Q9BV40 100 aa9.4□□□□□ -0.9
COMMD4-225ENST00000569245 INAFM2P0DMQ5 153 aa9.39□□□□□ -0.91
COMMD4-225ENST00000569245 C5orf38Q86SI9 138 aa9.39□□□□□ -0.91
COMMD4-225ENST00000569245 IGHV1-58A0A0C4DH39 117 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 E9PLD3 99 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 SPINK8P0C7L1 97 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 S100A12P80511 92 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
COMMD4-225ENST00000569245 CFAP161Q6P656 301 aa9.37□□□□□ -0.91
COMMD4-225ENST00000569245 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
COMMD4-225ENST00000569245 C12orf57Q99622 126 aa9.37□□□□□ -0.91
COMMD4-225ENST00000569245 SRRM2Q9UQ35 2752 aaKnown RBP9.37□□□□□ -0.91
COMMD4-225ENST00000569245 LEPROTO15243 131 aa9.36□□□□□ -0.91
COMMD4-225ENST00000569245 MALP21145 153 aa9.36□□□□□ -0.91
COMMD4-225ENST00000569245 SPATA45Q537H7 98 aa9.36□□□□□ -0.91
COMMD4-225ENST00000569245 PAM16Q9Y3D7 125 aa9.36□□□□□ -0.91
COMMD4-225ENST00000569245 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
COMMD4-225ENST00000569245 IGHV3-64A0A075B6Q5 118 aa9.35□□□□□ -0.91
COMMD4-225ENST00000569245 IGKV2D-26A0A0A0MRZ7 120 aa9.35□□□□□ -0.91
COMMD4-225ENST00000569245 APOMO95445 188 aa9.35□□□□□ -0.91
COMMD4-225ENST00000569245 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
COMMD4-225ENST00000569245 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
COMMD4-225ENST00000569245 PLEKHB2Q96CS7 222 aa9.35□□□□□ -0.91
COMMD4-225ENST00000569245 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
COMMD4-225ENST00000569245 PLA2G1BP04054 148 aaKnown RBP9.34□□□□□ -0.91
COMMD4-225ENST00000569245 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
COMMD4-225ENST00000569245 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
COMMD4-225ENST00000569245 J3QQQ9 107 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 NMUP48645 174 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 HIGD2BQ4VC39 106 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 Q8IZM0 81 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 COX7B2Q8TF08 81 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 ORAOV1Q8WV07 137 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
COMMD4-225ENST00000569245 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
COMMD4-225ENST00000569245 KIAA0087Q14695 138 aa9.31□□□□□ -0.92
COMMD4-225ENST00000569245 C15orf56Q8N910 161 aa9.31□□□□□ -0.92
COMMD4-225ENST00000569245 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
COMMD4-225ENST00000569245 SLPIP03973 132 aa9.3□□□□□ -0.92
COMMD4-225ENST00000569245 COX8AP10176 69 aa9.3□□□□□ -0.92
COMMD4-225ENST00000569245 SDIM1Q6ZPB5 146 aa9.3□□□□□ -0.92
COMMD4-225ENST00000569245 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
COMMD4-225ENST00000569245 DLEU1O43261 78 aa9.29□□□□□ -0.92
COMMD4-225ENST00000569245 PRSS2P07478 247 aa9.29□□□□□ -0.92
COMMD4-225ENST00000569245 SPAG11BQ08648 103 aa9.29□□□□□ -0.92
COMMD4-225ENST00000569245 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
COMMD4-225ENST00000569245 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.29□□□□□ -0.92
COMMD4-225ENST00000569245 NDUFA1O15239 70 aa9.28□□□□□ -0.92
COMMD4-225ENST00000569245 CXCL5P42830 114 aa9.28□□□□□ -0.92
COMMD4-225ENST00000569245 C6orf226Q5I0X4 101 aa9.28□□□□□ -0.92
COMMD4-225ENST00000569245 SFTA2Q6UW10 78 aa9.28□□□□□ -0.92
COMMD4-225ENST00000569245 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
COMMD4-225ENST00000569245 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
COMMD4-225ENST00000569245 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
COMMD4-225ENST00000569245 MYMXA0A1B0GTQ4 84 aa9.27□□□□□ -0.93
COMMD4-225ENST00000569245 ZNF815PA8K554 130 aa9.27□□□□□ -0.93
COMMD4-225ENST00000569245 F8WDY8 70 aa9.27□□□□□ -0.93
COMMD4-225ENST00000569245 ZNF561-AS1K7EIQ3 104 aa9.27□□□□□ -0.93
COMMD4-225ENST00000569245 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.93
COMMD4-225ENST00000569245 C14orf144Q96I85 54 aa9.27□□□□□ -0.93
COMMD4-225ENST00000569245 C2orf48Q96LS8 159 aa9.27□□□□□ -0.93
COMMD4-225ENST00000569245 PANO1I0J062 215 aa9.26□□□□□ -0.93
COMMD4-225ENST00000569245 SLC25A34Q6PIV7 304 aa9.26□□□□□ -0.93
COMMD4-225ENST00000569245 HERV-K104P63124 156 aa9.25□□□□□ -0.93
COMMD4-225ENST00000569245 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
COMMD4-225ENST00000569245 PRO1933Q9H354 126 aa9.25□□□□□ -0.93
COMMD4-225ENST00000569245 UQCR10Q9UDW1 63 aa9.25□□□□□ -0.93
COMMD4-225ENST00000569245 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
COMMD4-225ENST00000569245 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
COMMD4-225ENST00000569245 CKS1BP61024 79 aa9.24□□□□□ -0.93
COMMD4-225ENST00000569245 TSTD3H0UI37 97 aa9.23□□□□□ -0.93
COMMD4-225ENST00000569245 C2orf82Q6UX34 121 aa9.23□□□□□ -0.93
COMMD4-225ENST00000569245 MIEN1Q9BRT3 115 aa9.23□□□□□ -0.93
COMMD4-225ENST00000569245 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
COMMD4-225ENST00000569245 A0A0J9YXY3 114 aa9.22□□□□□ -0.93
COMMD4-225ENST00000569245 RPL37AP61513 92 aaKnown RBP9.22□□□□□ -0.93
COMMD4-225ENST00000569245 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
COMMD4-225ENST00000569245 HERC1Q15751 4861 aa9.21□□□□□ -0.93
COMMD4-225ENST00000569245 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.94
COMMD4-225ENST00000569245 UNQ6190/PRO20217Q6UXQ8 127 aa9.21□□□□□ -0.94
COMMD4-225ENST00000569245 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
COMMD4-225ENST00000569245 CARD19Q96LW7 228 aa9.21□□□□□ -0.94
COMMD4-225ENST00000569245 TP73-AS1Q9UF72 201 aa9.21□□□□□ -0.94
COMMD4-225ENST00000569245 A0A087WYN8 130 aa9.2□□□□□ -0.94
COMMD4-225ENST00000569245 TRBV30A0A0K0K1B3 111 aa9.2□□□□□ -0.94
COMMD4-225ENST00000569245 LINC00587B1AMM8 73 aa9.2□□□□□ -0.94
COMMD4-225ENST00000569245 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
COMMD4-225ENST00000569245 CIRBPQ14011 172 aaKnown RBP9.2□□□□□ -0.94
COMMD4-225ENST00000569245 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
COMMD4-225ENST00000569245 SCGB1D4Q6XE38 83 aa9.2□□□□□ -0.94
COMMD4-225ENST00000569245 HIGD1BQ9P298 99 aa9.2□□□□□ -0.94
COMMD4-225ENST00000569245 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms