RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
CDH3-210ENST00000569117 SPAG11BQ08648 103 aa6.85□□□□□ -1.31
CDH3-210ENST00000569117 JOSD1Q15040 202 aaPredicted RBP6.85□□□□□ -1.31
CDH3-210ENST00000569117 ORAOV1Q8WV07 137 aa6.85□□□□□ -1.31
CDH3-210ENST00000569117 HERVK_113P61574 105 aa6.84□□□□□ -1.31
CDH3-210ENST00000569117 Q8IZM0 81 aa6.84□□□□□ -1.31
CDH3-210ENST00000569117 ATOH7Q8N100 152 aa6.84□□□□□ -1.31
CDH3-210ENST00000569117 Q8N814 137 aa6.84□□□□□ -1.31
CDH3-210ENST00000569117 FAT2Q9NYQ8 4349 aa6.84□□□□□ -1.31
CDH3-210ENST00000569117 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
CDH3-210ENST00000569117 HIGD2BQ4VC39 106 aa6.83□□□□□ -1.32
CDH3-210ENST00000569117 RYR3Q15413 4870 aa6.83□□□□□ -1.32
CDH3-210ENST00000569117 E9PLD3 99 aa6.82□□□□□ -1.32
CDH3-210ENST00000569117 PRSS2P07478 247 aa6.82□□□□□ -1.32
CDH3-210ENST00000569117 VPREB1P12018 145 aa6.82□□□□□ -1.32
CDH3-210ENST00000569117 KIAA0087Q14695 138 aa6.82□□□□□ -1.32
CDH3-210ENST00000569117 PYY3Q5JQD4 70 aa6.82□□□□□ -1.32
CDH3-210ENST00000569117 COX7B2Q8TF08 81 aa6.82□□□□□ -1.32
CDH3-210ENST00000569117 C2orf48Q96LS8 159 aa6.82□□□□□ -1.32
CDH3-210ENST00000569117 LOC105371267A0A1B0GV96 52 aa6.81□□□□□ -1.32
CDH3-210ENST00000569117 F8WDY8 70 aa6.81□□□□□ -1.32
CDH3-210ENST00000569117 CXCL5P42830 114 aa6.81□□□□□ -1.32
CDH3-210ENST00000569117 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
CDH3-210ENST00000569117 STPG4Q8N801 248 aa6.81□□□□□ -1.32
CDH3-210ENST00000569117 NTN5Q8WTR8 489 aaPredicted RBP6.81□□□□□ -1.32
CDH3-210ENST00000569117 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
CDH3-210ENST00000569117 LEPROTO15243 131 aa6.8□□□□□ -1.32
CDH3-210ENST00000569117 TSPEAR-AS2P59090 65 aa6.8□□□□□ -1.32
CDH3-210ENST00000569117 SFTA2Q6UW10 78 aa6.8□□□□□ -1.32
CDH3-210ENST00000569117 PLEKHB2Q96CS7 222 aa6.8□□□□□ -1.32
CDH3-210ENST00000569117 LINC00526Q96FQ7 95 aa6.8□□□□□ -1.32
CDH3-210ENST00000569117 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.79□□□□□ -1.32
CDH3-210ENST00000569117 HSBP1L1C9JCN9 74 aa6.79□□□□□ -1.32
CDH3-210ENST00000569117 NDUFA1O15239 70 aa6.79□□□□□ -1.32
CDH3-210ENST00000569117 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
CDH3-210ENST00000569117 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
CDH3-210ENST00000569117 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
CDH3-210ENST00000569117 CAMK2N2Q96S95 79 aa6.79□□□□□ -1.32
CDH3-210ENST00000569117 IGKV2D-26A0A0A0MRZ7 120 aa6.78□□□□□ -1.32
CDH3-210ENST00000569117 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.78□□□□□ -1.32
CDH3-210ENST00000569117 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
CDH3-210ENST00000569117 J3QQQ9 107 aa6.78□□□□□ -1.32
CDH3-210ENST00000569117 SLPIP03973 132 aa6.78□□□□□ -1.32
CDH3-210ENST00000569117 CKS1BP61024 79 aa6.78□□□□□ -1.32
CDH3-210ENST00000569117 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
CDH3-210ENST00000569117 C2orf82Q6UX34 121 aa6.78□□□□□ -1.32
CDH3-210ENST00000569117 ZNF625Q96I27 306 aaPredicted RBP6.78□□□□□ -1.32
CDH3-210ENST00000569117 PKD1P98161 4303 aa6.77□□□□□ -1.33
CDH3-210ENST00000569117 TRBV30A0A0K0K1B3 111 aa6.77□□□□□ -1.33
CDH3-210ENST00000569117 SMIM6P0DI80 62 aa6.77□□□□□ -1.33
CDH3-210ENST00000569117 LGALS3P17931 250 aaKnown RBP6.77□□□□□ -1.33
CDH3-210ENST00000569117 NMUP48645 174 aa6.77□□□□□ -1.33
CDH3-210ENST00000569117 Q6ZRU5 148 aa6.77□□□□□ -1.33
CDH3-210ENST00000569117 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
CDH3-210ENST00000569117 DNAH11Q96DT5 4516 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 C10orf25Q5T742 122 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 UNQ6190/PRO20217Q6UXQ8 127 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 C6orf48Q9UBA6 75 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
CDH3-210ENST00000569117 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
CDH3-210ENST00000569117 HERV-K104P63124 156 aa6.75□□□□□ -1.33
CDH3-210ENST00000569117 C9orf163Q8N9P6 203 aa6.75□□□□□ -1.33
CDH3-210ENST00000569117 PAM16Q9Y3D7 125 aa6.74□□□□□ -1.33
CDH3-210ENST00000569117 ZNF815PA8K554 130 aa6.73□□□□□ -1.33
CDH3-210ENST00000569117 TLX1NBP0CAT3 122 aa6.73□□□□□ -1.33
CDH3-210ENST00000569117 FUSP35637 526 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDH3-210ENST00000569117 SPATA45Q537H7 98 aa6.73□□□□□ -1.33
CDH3-210ENST00000569117 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
CDH3-210ENST00000569117 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
CDH3-210ENST00000569117 TTTY13Q9BZ97 58 aa6.73□□□□□ -1.33
CDH3-210ENST00000569117 PKIGQ9Y2B9 76 aa6.73□□□□□ -1.33
CDH3-210ENST00000569117 COX17Q14061 63 aa6.72□□□□□ -1.33
CDH3-210ENST00000569117 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
CDH3-210ENST00000569117 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
CDH3-210ENST00000569117 COX8AP10176 69 aa6.71□□□□□ -1.34
CDH3-210ENST00000569117 S100A12P80511 92 aa6.71□□□□□ -1.34
CDH3-210ENST00000569117 LINC01620Q4KN68 170 aa6.71□□□□□ -1.34
CDH3-210ENST00000569117 C9orf116Q5BN46 136 aaPredicted RBP6.71□□□□□ -1.34
CDH3-210ENST00000569117 MEIG1Q5JSS6 88 aa6.71□□□□□ -1.34
CDH3-210ENST00000569117 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.34
CDH3-210ENST00000569117 PKHD1P08F94 4074 aa6.71□□□□□ -1.34
CDH3-210ENST00000569117 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
CDH3-210ENST00000569117 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
CDH3-210ENST00000569117 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
CDH3-210ENST00000569117 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
CDH3-210ENST00000569117 DLEU1O43261 78 aa6.7□□□□□ -1.34
CDH3-210ENST00000569117 BOD1L2Q8IYS8 172 aa6.7□□□□□ -1.34
CDH3-210ENST00000569117 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
CDH3-210ENST00000569117 TIMM17BO60830 172 aa6.69□□□□□ -1.34
CDH3-210ENST00000569117 PFN2P35080 140 aa6.69□□□□□ -1.34
CDH3-210ENST00000569117 RPL18AQ02543 176 aaKnown RBP6.69□□□□□ -1.34
CDH3-210ENST00000569117 SDIM1Q6ZPB5 146 aa6.69□□□□□ -1.34
CDH3-210ENST00000569117 Q6ZRP5 223 aa6.69□□□□□ -1.34
CDH3-210ENST00000569117 TP73-AS1Q9UF72 201 aa6.69□□□□□ -1.34
CDH3-210ENST00000569117 A0A096LNI7 61 aa6.68□□□□□ -1.34
CDH3-210ENST00000569117 C16orf90A8MZG2 172 aa6.68□□□□□ -1.34
CDH3-210ENST00000569117 SMIM13P0DJ93 91 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms