RNA–Protein interactions for RNA: ENST00000568428.5

SCAPER-220, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-220ENST00000568428 IGKV2-29A2NJV5 120 aaPredicted RBP2.42□□□□□ -2.02
SCAPER-220ENST00000568428 D6R8Y8 96 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 F8W036 122 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 TCAPO15273 167 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 PSCAO43653 123 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 NPYP01303 97 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 FGF6P10767 208 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 CKS2P33552 79 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 FUSP35637 526 aaKnown RBP eCLIP2.42□□□□□ -2.02
SCAPER-220ENST00000568428 TMEM136Q6ZRR5 245 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 DEFB104AQ8WTQ1 72 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 BAALCQ8WXS3 180 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 BTF3L4Q96K17 158 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 SMIM2Q9BVW6 85 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 LAMTOR2Q9Y2Q5 125 aa2.42□□□□□ -2.02
SCAPER-220ENST00000568428 FAT3Q8TDW7 4589 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 LINC00959A0A1B0GUT2 108 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 C7orf77A4D0Y5 90 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 LINC01546A6NGU7 62 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 UBE2L6O14933 153 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 LECT2O14960 151 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 CCL25O15444 150 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 CRPP02741 224 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 CNBPP62633 177 aaKnown RBP2.41□□□□□ -2.02
SCAPER-220ENST00000568428 MRPS36P82909 103 aaKnown RBP2.41□□□□□ -2.02
SCAPER-220ENST00000568428 RHEBQ15382 184 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 ORMDL3Q8N138 153 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 ZNF664Q8N3J9 261 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 C9orf163Q8N9P6 203 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 OR5A1Q8NGJ0 315 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 PRELID3AQ96N28 172 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 UBE2D4Q9Y2X8 147 aa2.41□□□□□ -2.02
SCAPER-220ENST00000568428 LRP1Q07954 4544 aaKnown RBP2.41□□□□□ -2.02
SCAPER-220ENST00000568428 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
SCAPER-220ENST00000568428 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 GVQW2A0A096LPI5 108 aaPredicted RBP2.4□□□□□ -2.03
SCAPER-220ENST00000568428 K7EMI3 77 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 FCER1GP30273 86 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 RPL39P62891 51 aaKnown RBP2.4□□□□□ -2.03
SCAPER-220ENST00000568428 CIRBPQ14011 172 aaKnown RBP2.4□□□□□ -2.03
SCAPER-220ENST00000568428 AMMECR1LQ6DCA0 310 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 CLPSL2Q6UWE3 100 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 SDIM1Q6ZPB5 146 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 Q8N8P6 123 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 C15orf56Q8N910 161 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 CHCHD10Q8WYQ3 142 aaPredicted RBP2.4□□□□□ -2.03
SCAPER-220ENST00000568428 YPEL4Q96NS1 127 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 GNB1LQ9BYB4 327 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 SPANXA1Q9NS26 97 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 HERC1Q15751 4861 aa2.4□□□□□ -2.03
SCAPER-220ENST00000568428 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
SCAPER-220ENST00000568428 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.39□□□□□ -2.03
SCAPER-220ENST00000568428 IGHV3OR16-9A0A0B4J2B5 98 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 IGIPA6NJ69 53 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 C1orf196B1AJZ1 125 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 E9PLD3 99 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 HLA-DQA1P01909 254 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 MT-ND6P03923 174 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 KRTAP10-4P60372 401 aaPredicted RBP2.39□□□□□ -2.03
SCAPER-220ENST00000568428 SMAGPQ0VAQ4 97 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 COX19Q49B96 90 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 RNASEKQ6P5S7 137 aaKnown RBP2.39□□□□□ -2.03
SCAPER-220ENST00000568428 Q6ZUT4 128 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 FAM19A3Q7Z5A8 133 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 TMEM101Q96IK0 257 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 AMELXQ99217 191 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 MAP1LC3AQ9H492 121 aa2.39□□□□□ -2.03
SCAPER-220ENST00000568428 KRTAP4-16G5E9R7 235 aaPredicted RBP2.38□□□□□ -2.03
SCAPER-220ENST00000568428 SNAPINO95295 136 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 APOC3P02656 99 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 S100PP25815 95 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 IFI27P40305 119 aaPredicted RBP2.38□□□□□ -2.03
SCAPER-220ENST00000568428 XCL1P47992 114 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 SS18Q15532 418 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 LINC01620Q4KN68 170 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 ORMDL2Q53FV1 153 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 LINC00173Q6ZV60 143 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 SVBPQ8N300 66 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 C7orf33Q8WU49 177 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 CHAC1Q9BUX1 264 aa2.38□□□□□ -2.03
SCAPER-220ENST00000568428 NXT2Q9NPJ8 142 aaKnown RBP2.38□□□□□ -2.03
SCAPER-220ENST00000568428 A0A096LNJ9 63 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 TGIF2-C20orf24A0A0A6YYL0 155 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 IGHV1-58A0A0C4DH39 117 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 IGKV3OR2-268A0A0C4DH90 116 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 LOC389332A0A1B0GUA5 103 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 COX7A2LO14548 114 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 RAB5AP20339 215 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 UBE2D1P51668 147 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 KIAA0087Q14695 138 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 RNASE13Q5GAN3 156 aaKnown RBP2.37□□□□□ -2.03
SCAPER-220ENST00000568428 SCXQ7RTU7 201 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 CIRBP-AS1Q8TBR5 109 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 TOMM6Q96B49 74 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 TIMM17AQ99595 171 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 CYSLTR1Q9Y271 337 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 TNXBP22105 4242 aa2.37□□□□□ -2.03
SCAPER-220ENST00000568428 IGHV3-64A0A075B6Q5 118 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms