RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 LOC107984640A0A0U1RRK4 108 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 F8WDY8 70 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 INAFM2P0DMQ5 153 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 FAM19A2Q8N3H0 131 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 STPG4Q8N801 248 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 MRPL35Q9NZE8 188 aaKnown RBP8.23□□□□□ -1.09
CNOT1-213ENST00000568158 C6orf48Q9UBA6 75 aa8.23□□□□□ -1.09
CNOT1-213ENST00000568158 NUPR1O60356 82 aa8.22□□□□□ -1.09
CNOT1-213ENST00000568158 ATP5LO75964 103 aa8.22□□□□□ -1.09
CNOT1-213ENST00000568158 C6orf226Q5I0X4 101 aa8.22□□□□□ -1.09
CNOT1-213ENST00000568158 PACRGQ96M98 296 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-213ENST00000568158 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
CNOT1-213ENST00000568158 PCLOQ9Y6V0 5065 aa8.22□□□□□ -1.09
CNOT1-213ENST00000568158 HSBP1O75506 76 aa8.21□□□□□ -1.1
CNOT1-213ENST00000568158 PLA2G1BP04054 148 aaKnown RBP8.21□□□□□ -1.1
CNOT1-213ENST00000568158 PRSS2P07478 247 aa8.21□□□□□ -1.1
CNOT1-213ENST00000568158 PTTG1IPP53801 180 aa8.21□□□□□ -1.1
CNOT1-213ENST00000568158 LINC00310P59036 64 aa8.21□□□□□ -1.1
CNOT1-213ENST00000568158 IGLV5-45A0A087WSX0 123 aa8.2□□□□□ -1.1
CNOT1-213ENST00000568158 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
CNOT1-213ENST00000568158 SERF1AO75920 110 aa8.2□□□□□ -1.1
CNOT1-213ENST00000568158 SPINK8P0C7L1 97 aa8.2□□□□□ -1.1
CNOT1-213ENST00000568158 RPL18AQ02543 176 aaKnown RBP8.2□□□□□ -1.1
CNOT1-213ENST00000568158 C9orf116Q5BN46 136 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-213ENST00000568158 PKIGQ9Y2B9 76 aa8.2□□□□□ -1.1
CNOT1-213ENST00000568158 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
CNOT1-213ENST00000568158 IGLC3P0DOY3 106 aa8.19□□□□□ -1.1
CNOT1-213ENST00000568158 KRTAP10-4P60372 401 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-213ENST00000568158 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
CNOT1-213ENST00000568158 Q8IZM0 81 aa8.19□□□□□ -1.1
CNOT1-213ENST00000568158 IFI27L1Q96BM0 104 aa8.19□□□□□ -1.1
CNOT1-213ENST00000568158 LINC00474Q9P2X8 69 aa8.19□□□□□ -1.1
CNOT1-213ENST00000568158 CKS1BP61024 79 aa8.18□□□□□ -1.1
CNOT1-213ENST00000568158 RPL37AP61513 92 aaKnown RBP8.18□□□□□ -1.1
CNOT1-213ENST00000568158 Q6ZRP5 223 aa8.18□□□□□ -1.1
CNOT1-213ENST00000568158 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
CNOT1-213ENST00000568158 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
CNOT1-213ENST00000568158 C11orf86A6NJI1 115 aa8.17□□□□□ -1.1
CNOT1-213ENST00000568158 TLX1NBP0CAT3 122 aa8.17□□□□□ -1.1
CNOT1-213ENST00000568158 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
CNOT1-213ENST00000568158 GAGE2EQ4V326 116 aa8.17□□□□□ -1.1
CNOT1-213ENST00000568158 KRTAP19-1Q8IUB9 90 aa8.17□□□□□ -1.1
CNOT1-213ENST00000568158 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
CNOT1-213ENST00000568158 GAGE2DQ9UEU5 116 aa8.17□□□□□ -1.1
CNOT1-213ENST00000568158 CHTOPQ9Y3Y2 248 aaKnown RBP8.17□□□□□ -1.1
CNOT1-213ENST00000568158 H3BRM9 83 aa8.15□□□□□ -1.1
CNOT1-213ENST00000568158 FABP4P15090 132 aa8.15□□□□□ -1.1
CNOT1-213ENST00000568158 TRAV12-1A0A0B4J245 112 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 F8VRH5 84 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BKO60814 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BJP06899 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BOP23527 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BBP33778 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BDP58876 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BCP62807 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST2H2BEQ16778 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-213ENST00000568158 TMEM170BQ5T4T1 132 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BHQ93079 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BNQ99877 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 HIST1H2BMQ99879 126 aa8.14□□□□□ -1.11
CNOT1-213ENST00000568158 FAM168BA1KXE4 195 aa8.13□□□□□ -1.11
CNOT1-213ENST00000568158 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
CNOT1-213ENST00000568158 H0Y8G0 127 aa8.13□□□□□ -1.11
CNOT1-213ENST00000568158 C7orf33Q8WU49 177 aa8.13□□□□□ -1.11
CNOT1-213ENST00000568158 IGLV5-39A0A0G2JS06 123 aa8.12□□□□□ -1.11
CNOT1-213ENST00000568158 S100A1P23297 94 aa8.12□□□□□ -1.11
CNOT1-213ENST00000568158 CXCL5P42830 114 aa8.12□□□□□ -1.11
CNOT1-213ENST00000568158 HNRNPA3P51991 378 aaKnown RBP8.12□□□□□ -1.11
CNOT1-213ENST00000568158 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
CNOT1-213ENST00000568158 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-213ENST00000568158 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
CNOT1-213ENST00000568158 KRTAP7-1Q8IUC3 87 aa8.11□□□□□ -1.11
CNOT1-213ENST00000568158 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
CNOT1-213ENST00000568158 ODF1Q14990 250 aa8.1□□□□□ -1.11
CNOT1-213ENST00000568158 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
CNOT1-213ENST00000568158 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
CNOT1-213ENST00000568158 TMEM223A0PJW6 202 aa8.09□□□□□ -1.11
CNOT1-213ENST00000568158 FAM19A5Q7Z5A7 132 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-213ENST00000568158 XAGE1AQ9HD64 81 aa8.09□□□□□ -1.11
CNOT1-213ENST00000568158 ZNF625Q96I27 306 aaPredicted RBP8.08□□□□□ -1.12
CNOT1-213ENST00000568158 PMCHL2Q9BQD1 86 aa8.08□□□□□ -1.12
CNOT1-213ENST00000568158 PFN2P35080 140 aa8.06□□□□□ -1.12
CNOT1-213ENST00000568158 PRR3P79522 188 aaKnown RBP8.06□□□□□ -1.12
CNOT1-213ENST00000568158 SERTAD4-AS1Q5TG53 156 aa8.06□□□□□ -1.12
CNOT1-213ENST00000568158 KRTAP11-1Q8IUC1 163 aa8.06□□□□□ -1.12
CNOT1-213ENST00000568158 MAP1LC3CQ9BXW4 147 aa8.06□□□□□ -1.12
CNOT1-213ENST00000568158 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
CNOT1-213ENST00000568158 M0QXV9 152 aa8.03□□□□□ -1.12
CNOT1-213ENST00000568158 DPM2O94777 84 aa8.03□□□□□ -1.12
CNOT1-213ENST00000568158 COA6Q5JTJ3 125 aaKnown RBP8.03□□□□□ -1.12
CNOT1-213ENST00000568158 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
CNOT1-213ENST00000568158 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
CNOT1-213ENST00000568158 C22orf24Q9Y442 160 aa8.03□□□□□ -1.12
CNOT1-213ENST00000568158 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
CNOT1-213ENST00000568158 IGKCP01834 107 aa8.02□□□□□ -1.13
CNOT1-213ENST00000568158 PLNP26678 52 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms