RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
COMMD4-222ENST00000568034 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
COMMD4-222ENST00000568034 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
COMMD4-222ENST00000568034 AKR1D1P51857 326 aa11.55□□□□□ -0.56
COMMD4-222ENST00000568034 C2orf82Q6UX34 121 aa11.55□□□□□ -0.56
COMMD4-222ENST00000568034 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
COMMD4-222ENST00000568034 HERC2O95714 4834 aa11.55□□□□□ -0.56
COMMD4-222ENST00000568034 NDUFA1O15239 70 aa11.54□□□□□ -0.56
COMMD4-222ENST00000568034 LINC01545Q5VT33 79 aa11.54□□□□□ -0.56
COMMD4-222ENST00000568034 PET117Q6UWS5 81 aa11.54□□□□□ -0.56
COMMD4-222ENST00000568034 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
COMMD4-222ENST00000568034 PANO1I0J062 215 aa11.53□□□□□ -0.56
COMMD4-222ENST00000568034 DPM2O94777 84 aa11.53□□□□□ -0.56
COMMD4-222ENST00000568034 PRSS2P07478 247 aa11.53□□□□□ -0.56
COMMD4-222ENST00000568034 PLNP26678 52 aa11.53□□□□□ -0.56
COMMD4-222ENST00000568034 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
COMMD4-222ENST00000568034 FAT1Q14517 4588 aa11.52□□□□□ -0.56
COMMD4-222ENST00000568034 IGKCP01834 107 aa11.52□□□□□ -0.57
COMMD4-222ENST00000568034 KRTDAPP60985 99 aa11.52□□□□□ -0.57
COMMD4-222ENST00000568034 RNF151Q2KHN1 245 aa11.52□□□□□ -0.57
COMMD4-222ENST00000568034 S100A2P29034 98 aa11.51□□□□□ -0.57
COMMD4-222ENST00000568034 XGP55808 180 aa11.51□□□□□ -0.57
COMMD4-222ENST00000568034 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
COMMD4-222ENST00000568034 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-222ENST00000568034 CXCL5P42830 114 aa11.5□□□□□ -0.57
COMMD4-222ENST00000568034 TRBV30A0A0K0K1B3 111 aa11.49□□□□□ -0.57
COMMD4-222ENST00000568034 CDK2AP2O75956 126 aa11.49□□□□□ -0.57
COMMD4-222ENST00000568034 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
COMMD4-222ENST00000568034 CKS1BP61024 79 aa11.49□□□□□ -0.57
COMMD4-222ENST00000568034 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
COMMD4-222ENST00000568034 A0A096LNI7 61 aa11.48□□□□□ -0.57
COMMD4-222ENST00000568034 HAMPP81172 84 aa11.48□□□□□ -0.57
COMMD4-222ENST00000568034 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
COMMD4-222ENST00000568034 C9orf116Q5BN46 136 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-222ENST00000568034 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.57
COMMD4-222ENST00000568034 SPACA4Q8TDM5 124 aa11.46□□□□□ -0.57
COMMD4-222ENST00000568034 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
COMMD4-222ENST00000568034 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
COMMD4-222ENST00000568034 ZNF625Q96I27 306 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-222ENST00000568034 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
COMMD4-222ENST00000568034 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
COMMD4-222ENST00000568034 Q6ZRP5 223 aa11.44□□□□□ -0.58
COMMD4-222ENST00000568034 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
COMMD4-222ENST00000568034 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
COMMD4-222ENST00000568034 C20orf202A1L168 122 aa11.42□□□□□ -0.58
COMMD4-222ENST00000568034 NDUFC2-KCTD14E9PQ53 114 aa11.42□□□□□ -0.58
COMMD4-222ENST00000568034 LEPROTO15243 131 aa11.42□□□□□ -0.58
COMMD4-222ENST00000568034 SMIM6P0DI80 62 aa11.42□□□□□ -0.58
COMMD4-222ENST00000568034 HERVK_113P61574 105 aa11.42□□□□□ -0.58
COMMD4-222ENST00000568034 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
COMMD4-222ENST00000568034 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
COMMD4-222ENST00000568034 E9PLD3 99 aa11.41□□□□□ -0.58
COMMD4-222ENST00000568034 STPG4Q8N801 248 aa11.41□□□□□ -0.58
COMMD4-222ENST00000568034 KRTAP17-1Q9BYP8 105 aa11.41□□□□□ -0.58
COMMD4-222ENST00000568034 MAJINQ3KP22 176 aa11.4□□□□□ -0.58
COMMD4-222ENST00000568034 PLEKHB2Q96CS7 222 aa11.4□□□□□ -0.58
COMMD4-222ENST00000568034 A0A087WYN8 130 aa11.39□□□□□ -0.59
COMMD4-222ENST00000568034 ATOH7Q8N100 152 aa11.39□□□□□ -0.59
COMMD4-222ENST00000568034 J3QQQ9 107 aa11.38□□□□□ -0.59
COMMD4-222ENST00000568034 SFTA2Q6UW10 78 aa11.38□□□□□ -0.59
COMMD4-222ENST00000568034 LINC00518Q8N0U6 118 aa11.38□□□□□ -0.59
COMMD4-222ENST00000568034 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
COMMD4-222ENST00000568034 LINC00474Q9P2X8 69 aa11.38□□□□□ -0.59
COMMD4-222ENST00000568034 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
COMMD4-222ENST00000568034 IGKV2D-26A0A0A0MRZ7 120 aa11.37□□□□□ -0.59
COMMD4-222ENST00000568034 GAGE2EQ4V326 116 aa11.37□□□□□ -0.59
COMMD4-222ENST00000568034 GAGE2DQ9UEU5 116 aa11.37□□□□□ -0.59
COMMD4-222ENST00000568034 A0A1W2PNN7 141 aa11.36□□□□□ -0.59
COMMD4-222ENST00000568034 EPM2AB3EWF7 344 aa11.36□□□□□ -0.59
COMMD4-222ENST00000568034 C9orf129Q5T035 196 aaKnown RBP11.36□□□□□ -0.59
COMMD4-222ENST00000568034 C12orf57Q99622 126 aa11.36□□□□□ -0.59
COMMD4-222ENST00000568034 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
COMMD4-222ENST00000568034 ANKRD39Q53RE8 183 aa11.35□□□□□ -0.59
COMMD4-222ENST00000568034 PCLOQ9Y6V0 5065 aa11.35□□□□□ -0.59
COMMD4-222ENST00000568034 LGALS3P17931 250 aaKnown RBP11.34□□□□□ -0.59
COMMD4-222ENST00000568034 HERV-K104P63124 156 aa11.34□□□□□ -0.59
COMMD4-222ENST00000568034 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
COMMD4-222ENST00000568034 MYMXA0A1B0GTQ4 84 aa11.33□□□□□ -0.6
COMMD4-222ENST00000568034 SMR3BP02814 79 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-222ENST00000568034 PFN2P35080 140 aa11.33□□□□□ -0.6
COMMD4-222ENST00000568034 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
COMMD4-222ENST00000568034 NMUP48645 174 aa11.32□□□□□ -0.6
COMMD4-222ENST00000568034 COX17Q14061 63 aa11.32□□□□□ -0.6
COMMD4-222ENST00000568034 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
COMMD4-222ENST00000568034 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
COMMD4-222ENST00000568034 TTTY13Q9BZ97 58 aa11.31□□□□□ -0.6
COMMD4-222ENST00000568034 VPS13BQ7Z7G8 4022 aa11.31□□□□□ -0.6
COMMD4-222ENST00000568034 SCGB1D1O95968 90 aa11.3□□□□□ -0.6
COMMD4-222ENST00000568034 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
COMMD4-222ENST00000568034 Q8N1X5 172 aa11.29□□□□□ -0.6
COMMD4-222ENST00000568034 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
COMMD4-222ENST00000568034 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
COMMD4-222ENST00000568034 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
COMMD4-222ENST00000568034 SND1-IT1Q9HBX3 110 aa11.28□□□□□ -0.6
COMMD4-222ENST00000568034 A0A0J9YXY3 114 aa11.27□□□□□ -0.61
COMMD4-222ENST00000568034 LINC00158P58513 81 aa11.27□□□□□ -0.61
COMMD4-222ENST00000568034 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-222ENST00000568034 LINC00528Q8N1L1 170 aa11.27□□□□□ -0.61
COMMD4-222ENST00000568034 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-222ENST00000568034 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms