RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 C10orf25Q5T742 122 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 C2orf82Q6UX34 121 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 SPACA4Q8TDM5 124 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 IFI27L1Q96BM0 104 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 HSPB8Q9UJY1 196 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
GINS3-209ENST00000567909 IGLC3P0DOY3 106 aa8.1□□□□□ -1.11
GINS3-209ENST00000567909 GAGE2BQ13066 116 aa8.1□□□□□ -1.11
GINS3-209ENST00000567909 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
GINS3-209ENST00000567909 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
GINS3-209ENST00000567909 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
GINS3-209ENST00000567909 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
GINS3-209ENST00000567909 IGLV5-45A0A087WSX0 123 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 A0A087WYN8 130 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 SMIM1B2RUZ4 78 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 NUPR1O60356 82 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 SPINK8P0C7L1 97 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 CKS1BP61024 79 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
GINS3-209ENST00000567909 RNF151Q2KHN1 245 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 HIST3H2BBQ8N257 126 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 C6orf48Q9UBA6 75 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 ABCA13Q86UQ4 5058 aa8.09□□□□□ -1.11
GINS3-209ENST00000567909 H3BRM9 83 aa8.08□□□□□ -1.12
GINS3-209ENST00000567909 Q8IZM0 81 aa8.08□□□□□ -1.12
GINS3-209ENST00000567909 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
GINS3-209ENST00000567909 CHTOPQ9Y3Y2 248 aaKnown RBP8.08□□□□□ -1.12
GINS3-209ENST00000567909 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
GINS3-209ENST00000567909 H0Y8G0 127 aa8.07□□□□□ -1.12
GINS3-209ENST00000567909 LEPROTL1O95214 131 aa8.07□□□□□ -1.12
GINS3-209ENST00000567909 FABP4P15090 132 aa8.07□□□□□ -1.12
GINS3-209ENST00000567909 ZNF22P17026 224 aaPredicted RBP8.07□□□□□ -1.12
GINS3-209ENST00000567909 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
GINS3-209ENST00000567909 STPG4Q8N801 248 aa8.07□□□□□ -1.12
GINS3-209ENST00000567909 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
GINS3-209ENST00000567909 C11orf86A6NJI1 115 aa8.06□□□□□ -1.12
GINS3-209ENST00000567909 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
GINS3-209ENST00000567909 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
GINS3-209ENST00000567909 HIST1H2BLQ99880 126 aa8.06□□□□□ -1.12
GINS3-209ENST00000567909 TRAV12-1A0A0B4J245 112 aa8.05□□□□□ -1.12
GINS3-209ENST00000567909 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
GINS3-209ENST00000567909 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
GINS3-209ENST00000567909 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
GINS3-209ENST00000567909 PLAC8Q9NZF1 115 aa8.05□□□□□ -1.12
GINS3-209ENST00000567909 C20orf202A1L168 122 aa8.04□□□□□ -1.12
GINS3-209ENST00000567909 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
GINS3-209ENST00000567909 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
GINS3-209ENST00000567909 F8VRH5 84 aa8.03□□□□□ -1.12
GINS3-209ENST00000567909 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
GINS3-209ENST00000567909 CXCL5P42830 114 aa8.03□□□□□ -1.12
GINS3-209ENST00000567909 Q6ZRP5 223 aa8.03□□□□□ -1.12
GINS3-209ENST00000567909 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
GINS3-209ENST00000567909 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
GINS3-209ENST00000567909 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
GINS3-209ENST00000567909 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
GINS3-209ENST00000567909 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
GINS3-209ENST00000567909 INAFM2P0DMQ5 153 aa8.01□□□□□ -1.13
GINS3-209ENST00000567909 ODF1Q14990 250 aa8.01□□□□□ -1.13
GINS3-209ENST00000567909 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
GINS3-209ENST00000567909 PET117Q6UWS5 81 aa8□□□□□ -1.13
GINS3-209ENST00000567909 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
GINS3-209ENST00000567909 PMCHL2Q9BQD1 86 aa7.99□□□□□ -1.13
GINS3-209ENST00000567909 FAM168BA1KXE4 195 aa7.98□□□□□ -1.13
GINS3-209ENST00000567909 KRTDAPP60985 99 aa7.98□□□□□ -1.13
GINS3-209ENST00000567909 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
GINS3-209ENST00000567909 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
GINS3-209ENST00000567909 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
GINS3-209ENST00000567909 KRTAP10-4P60372 401 aaPredicted RBP7.97□□□□□ -1.13
GINS3-209ENST00000567909 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
GINS3-209ENST00000567909 XAGE1AQ9HD64 81 aa7.97□□□□□ -1.13
GINS3-209ENST00000567909 PKHD1L1Q86WI1 4243 aa7.97□□□□□ -1.13
GINS3-209ENST00000567909 FLG2Q5D862 2391 aaPredicted RBP7.96□□□□□ -1.13
GINS3-209ENST00000567909 SYS1-DBNDD2H3BUS1 97 aa7.96□□□□□ -1.14
GINS3-209ENST00000567909 DPM2O94777 84 aa7.96□□□□□ -1.14
GINS3-209ENST00000567909 PLNP26678 52 aa7.96□□□□□ -1.14
GINS3-209ENST00000567909 S100A12P80511 92 aa7.96□□□□□ -1.14
GINS3-209ENST00000567909 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
GINS3-209ENST00000567909 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.14
GINS3-209ENST00000567909 IGKCP01834 107 aa7.95□□□□□ -1.14
GINS3-209ENST00000567909 C3orf79P0CE67 100 aa7.95□□□□□ -1.14
GINS3-209ENST00000567909 PFN2P35080 140 aa7.95□□□□□ -1.14
GINS3-209ENST00000567909 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
GINS3-209ENST00000567909 HSBP1L1C9JCN9 74 aa7.94□□□□□ -1.14
GINS3-209ENST00000567909 ERG28Q9UKR5 140 aa7.93□□□□□ -1.14
GINS3-209ENST00000567909 M0QXV9 152 aa7.92□□□□□ -1.14
GINS3-209ENST00000567909 HERVK_113P61574 105 aa7.92□□□□□ -1.14
GINS3-209ENST00000567909 PRR3P79522 188 aaKnown RBP7.92□□□□□ -1.14
GINS3-209ENST00000567909 SERTAD4-AS1Q5TG53 156 aa7.92□□□□□ -1.14
GINS3-209ENST00000567909 LINC01545Q5VT33 79 aa7.92□□□□□ -1.14
GINS3-209ENST00000567909 SFTA2Q6UW10 78 aa7.92□□□□□ -1.14
GINS3-209ENST00000567909 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
GINS3-209ENST00000567909 HNRNPA3P51991 378 aaKnown RBP7.91□□□□□ -1.14
GINS3-209ENST00000567909 A0A0U1RRA0 63 aa7.9□□□□□ -1.14
GINS3-209ENST00000567909 LEPROTO15243 131 aa7.9□□□□□ -1.14
GINS3-209ENST00000567909 TSPEAR-AS2P59090 65 aa7.9□□□□□ -1.14
GINS3-209ENST00000567909 PLEKHB2Q96CS7 222 aa7.9□□□□□ -1.14
GINS3-209ENST00000567909 NDUFA12Q9UI09 145 aa7.9□□□□□ -1.14
GINS3-209ENST00000567909 LINC00158P58513 81 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms