RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 Q8IZM0 81 aa10.94□□□□□ -0.66
COMMD4-220ENST00000567720 TOMM7Q9P0U1 55 aa10.94□□□□□ -0.66
COMMD4-220ENST00000567720 C6orf48Q9UBA6 75 aa10.94□□□□□ -0.66
COMMD4-220ENST00000567720 SRRM2Q9UQ35 2752 aaKnown RBP10.93□□□□□ -0.66
COMMD4-220ENST00000567720 SPINK8P0C7L1 97 aa10.93□□□□□ -0.66
COMMD4-220ENST00000567720 LINC00528Q8N1L1 170 aa10.93□□□□□ -0.66
COMMD4-220ENST00000567720 PKIGQ9Y2B9 76 aa10.93□□□□□ -0.66
COMMD4-220ENST00000567720 TRAV12-1A0A0B4J245 112 aa10.92□□□□□ -0.66
COMMD4-220ENST00000567720 LOC107984640A0A0U1RRK4 108 aa10.92□□□□□ -0.66
COMMD4-220ENST00000567720 C11orf86A6NJI1 115 aa10.92□□□□□ -0.66
COMMD4-220ENST00000567720 RNF151Q2KHN1 245 aa10.92□□□□□ -0.66
COMMD4-220ENST00000567720 A0A087WYN8 130 aa10.91□□□□□ -0.66
COMMD4-220ENST00000567720 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
COMMD4-220ENST00000567720 LEPROTL1O95214 131 aa10.91□□□□□ -0.66
COMMD4-220ENST00000567720 PRSS2P07478 247 aa10.91□□□□□ -0.66
COMMD4-220ENST00000567720 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
COMMD4-220ENST00000567720 MAJINQ3KP22 176 aa10.91□□□□□ -0.66
COMMD4-220ENST00000567720 CHTOPQ9Y3Y2 248 aaKnown RBP10.91□□□□□ -0.66
COMMD4-220ENST00000567720 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
COMMD4-220ENST00000567720 TRBV30A0A0K0K1B3 111 aa10.89□□□□□ -0.67
COMMD4-220ENST00000567720 H3BRM9 83 aa10.89□□□□□ -0.67
COMMD4-220ENST00000567720 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
COMMD4-220ENST00000567720 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
COMMD4-220ENST00000567720 IGLV5-39A0A0G2JS06 123 aa10.88□□□□□ -0.67
COMMD4-220ENST00000567720 F8VRH5 84 aa10.88□□□□□ -0.67
COMMD4-220ENST00000567720 COX7B2Q8TF08 81 aa10.88□□□□□ -0.67
COMMD4-220ENST00000567720 PKHD1L1Q86WI1 4243 aa10.88□□□□□ -0.67
COMMD4-220ENST00000567720 H0Y8G0 127 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 FABP4P15090 132 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 CKS1BP61024 79 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 ODF1Q14990 250 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
COMMD4-220ENST00000567720 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 STPG4Q8N801 248 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
COMMD4-220ENST00000567720 FAM229AH3BQW9 127 aa10.86□□□□□ -0.67
COMMD4-220ENST00000567720 CXCL5P42830 114 aa10.86□□□□□ -0.67
COMMD4-220ENST00000567720 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
COMMD4-220ENST00000567720 Q6ZRP5 223 aa10.86□□□□□ -0.67
COMMD4-220ENST00000567720 HSPB8Q9UJY1 196 aa10.86□□□□□ -0.67
COMMD4-220ENST00000567720 KRTAP10-4P60372 401 aaPredicted RBP10.84□□□□□ -0.67
COMMD4-220ENST00000567720 COA6Q5JTJ3 125 aaKnown RBP10.84□□□□□ -0.67
COMMD4-220ENST00000567720 DPH3Q96FX2 82 aa10.84□□□□□ -0.67
COMMD4-220ENST00000567720 NDUFC2-KCTD14E9PQ53 114 aa10.83□□□□□ -0.68
COMMD4-220ENST00000567720 MYCBP2O75592 4640 aa10.83□□□□□ -0.68
COMMD4-220ENST00000567720 A0A1W2PNN7 141 aa10.81□□□□□ -0.68
COMMD4-220ENST00000567720 TMEM223A0PJW6 202 aa10.81□□□□□ -0.68
COMMD4-220ENST00000567720 GAGE2EQ4V326 116 aa10.81□□□□□ -0.68
COMMD4-220ENST00000567720 GAGE2DQ9UEU5 116 aa10.81□□□□□ -0.68
COMMD4-220ENST00000567720 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
COMMD4-220ENST00000567720 PMCHL2Q9BQD1 86 aa10.8□□□□□ -0.68
COMMD4-220ENST00000567720 FAM168BA1KXE4 195 aa10.79□□□□□ -0.68
COMMD4-220ENST00000567720 RPL37AP61513 92 aaKnown RBP10.79□□□□□ -0.68
COMMD4-220ENST00000567720 MAP1LC3CQ9BXW4 147 aa10.79□□□□□ -0.68
COMMD4-220ENST00000567720 FLG2Q5D862 2391 aaPredicted RBP10.79□□□□□ -0.68
COMMD4-220ENST00000567720 C9orf129Q5T035 196 aaKnown RBP10.78□□□□□ -0.68
COMMD4-220ENST00000567720 PLNP26678 52 aa10.77□□□□□ -0.69
COMMD4-220ENST00000567720 SYS1-DBNDD2H3BUS1 97 aa10.76□□□□□ -0.69
COMMD4-220ENST00000567720 DPM2O94777 84 aa10.76□□□□□ -0.69
COMMD4-220ENST00000567720 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
COMMD4-220ENST00000567720 C7orf33Q8WU49 177 aa10.76□□□□□ -0.69
COMMD4-220ENST00000567720 ZNF625Q96I27 306 aaPredicted RBP10.76□□□□□ -0.69
COMMD4-220ENST00000567720 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
COMMD4-220ENST00000567720 IGKCP01834 107 aa10.74□□□□□ -0.69
COMMD4-220ENST00000567720 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
COMMD4-220ENST00000567720 XAGE1AQ9HD64 81 aa10.74□□□□□ -0.69
COMMD4-220ENST00000567720 TSPEAR-AS2P59090 65 aa10.73□□□□□ -0.69
COMMD4-220ENST00000567720 PHF5AQ7RTV0 110 aaKnown RBP10.73□□□□□ -0.69
COMMD4-220ENST00000567720 C3orf79P0CE67 100 aa10.72□□□□□ -0.69
COMMD4-220ENST00000567720 HNRNPA3P51991 378 aaKnown RBP10.72□□□□□ -0.69
COMMD4-220ENST00000567720 PRR3P79522 188 aaKnown RBP10.72□□□□□ -0.69
COMMD4-220ENST00000567720 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
COMMD4-220ENST00000567720 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
COMMD4-220ENST00000567720 FAT3Q8TDW7 4589 aa10.72□□□□□ -0.69
COMMD4-220ENST00000567720 SERTAD4-AS1Q5TG53 156 aa10.71□□□□□ -0.69
COMMD4-220ENST00000567720 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
COMMD4-220ENST00000567720 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
COMMD4-220ENST00000567720 M0QXV9 152 aa10.7□□□□□ -0.7
COMMD4-220ENST00000567720 PFN2P35080 140 aa10.7□□□□□ -0.7
COMMD4-220ENST00000567720 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
COMMD4-220ENST00000567720 KRTDAPP60985 99 aa10.69□□□□□ -0.7
COMMD4-220ENST00000567720 HIST3H2BBQ8N257 126 aa10.69□□□□□ -0.7
COMMD4-220ENST00000567720 LEPROTO15243 131 aa10.68□□□□□ -0.7
COMMD4-220ENST00000567720 HERVK_113P61574 105 aa10.68□□□□□ -0.7
COMMD4-220ENST00000567720 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
COMMD4-220ENST00000567720 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
COMMD4-220ENST00000567720 COX17Q14061 63 aa10.66□□□□□ -0.7
COMMD4-220ENST00000567720 PLEKHB2Q96CS7 222 aa10.66□□□□□ -0.7
COMMD4-220ENST00000567720 J3QQQ9 107 aa10.65□□□□□ -0.7
COMMD4-220ENST00000567720 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
COMMD4-220ENST00000567720 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.7
COMMD4-220ENST00000567720 PSORS1C2Q9UIG4 136 aa10.65□□□□□ -0.7
COMMD4-220ENST00000567720 E9PLD3 99 aa10.64□□□□□ -0.71
COMMD4-220ENST00000567720 A0A0U1RRA0 63 aa10.63□□□□□ -0.71
COMMD4-220ENST00000567720 S100A6P06703 90 aa10.63□□□□□ -0.71
COMMD4-220ENST00000567720 HERV-K104P63124 156 aa10.63□□□□□ -0.71
COMMD4-220ENST00000567720 PLA2G2DQ9UNK4 145 aa10.63□□□□□ -0.71
COMMD4-220ENST00000567720 C22orf24Q9Y442 160 aa10.63□□□□□ -0.71
COMMD4-220ENST00000567720 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms