RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ATP6V1G1O75348 118 aa7.85□□□□□ -1.15
RNF40-211ENST00000567365 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
RNF40-211ENST00000567365 S100A1P23297 94 aa7.85□□□□□ -1.15
RNF40-211ENST00000567365 Q8IZM0 81 aa7.85□□□□□ -1.15
RNF40-211ENST00000567365 LINC00469Q8N7U9 141 aa7.85□□□□□ -1.15
RNF40-211ENST00000567365 IFI27L1Q96BM0 104 aa7.85□□□□□ -1.15
RNF40-211ENST00000567365 HERC1Q15751 4861 aa7.85□□□□□ -1.15
RNF40-211ENST00000567365 TRAV12-1A0A0B4J245 112 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 LOC107984640A0A0U1RRK4 108 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 ZNF22P17026 224 aaPredicted RBP7.84□□□□□ -1.15
RNF40-211ENST00000567365 PTTG1IPP53801 180 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 C2orf82Q6UX34 121 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 PKIGQ9Y2B9 76 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
RNF40-211ENST00000567365 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
RNF40-211ENST00000567365 IGKV2-24A0A0C4DH68 120 aa7.83□□□□□ -1.16
RNF40-211ENST00000567365 C11orf86A6NJI1 115 aa7.83□□□□□ -1.16
RNF40-211ENST00000567365 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
RNF40-211ENST00000567365 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
RNF40-211ENST00000567365 PACRGQ96M98 296 aaPredicted RBP7.82□□□□□ -1.16
RNF40-211ENST00000567365 LINC00474Q9P2X8 69 aa7.82□□□□□ -1.16
RNF40-211ENST00000567365 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
RNF40-211ENST00000567365 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
RNF40-211ENST00000567365 SPINK8P0C7L1 97 aa7.81□□□□□ -1.16
RNF40-211ENST00000567365 NDUFA6P56556 154 aa7.81□□□□□ -1.16
RNF40-211ENST00000567365 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
RNF40-211ENST00000567365 Q6ZRP5 223 aa7.81□□□□□ -1.16
RNF40-211ENST00000567365 F8VRH5 84 aa7.8□□□□□ -1.16
RNF40-211ENST00000567365 ODF1Q14990 250 aa7.8□□□□□ -1.16
RNF40-211ENST00000567365 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
RNF40-211ENST00000567365 STPG4Q8N801 248 aa7.8□□□□□ -1.16
RNF40-211ENST00000567365 TOMM7Q9P0U1 55 aa7.8□□□□□ -1.16
RNF40-211ENST00000567365 CHTOPQ9Y3Y2 248 aaKnown RBP7.8□□□□□ -1.16
RNF40-211ENST00000567365 A0A1W2PNN7 141 aa7.79□□□□□ -1.16
RNF40-211ENST00000567365 H3BRM9 83 aa7.79□□□□□ -1.16
RNF40-211ENST00000567365 PRSS2P07478 247 aa7.79□□□□□ -1.16
RNF40-211ENST00000567365 CXCL5P42830 114 aa7.79□□□□□ -1.16
RNF40-211ENST00000567365 GAGE2BQ13066 116 aa7.79□□□□□ -1.16
RNF40-211ENST00000567365 C9orf116Q5BN46 136 aaPredicted RBP7.79□□□□□ -1.16
RNF40-211ENST00000567365 COX7B2Q8TF08 81 aa7.79□□□□□ -1.16
RNF40-211ENST00000567365 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
RNF40-211ENST00000567365 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
RNF40-211ENST00000567365 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
RNF40-211ENST00000567365 CKS1BP61024 79 aa7.78□□□□□ -1.16
RNF40-211ENST00000567365 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
RNF40-211ENST00000567365 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
RNF40-211ENST00000567365 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.17
RNF40-211ENST00000567365 TMEM223A0PJW6 202 aa7.76□□□□□ -1.17
RNF40-211ENST00000567365 PLA2G1BP04054 148 aaKnown RBP7.76□□□□□ -1.17
RNF40-211ENST00000567365 FABP4P15090 132 aa7.76□□□□□ -1.17
RNF40-211ENST00000567365 DPH3Q96FX2 82 aa7.76□□□□□ -1.17
RNF40-211ENST00000567365 C9orf129Q5T035 196 aaKnown RBP7.75□□□□□ -1.17
RNF40-211ENST00000567365 TMEM170BQ5T4T1 132 aa7.75□□□□□ -1.17
RNF40-211ENST00000567365 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
RNF40-211ENST00000567365 ZNF625Q96I27 306 aaPredicted RBP7.74□□□□□ -1.17
RNF40-211ENST00000567365 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
RNF40-211ENST00000567365 HNRNPA3P51991 378 aaKnown RBP7.73□□□□□ -1.17
RNF40-211ENST00000567365 GAGE2EQ4V326 116 aa7.73□□□□□ -1.17
RNF40-211ENST00000567365 GAGE2DQ9UEU5 116 aa7.73□□□□□ -1.17
RNF40-211ENST00000567365 MAP1LC3CQ9BXW4 147 aa7.72□□□□□ -1.17
RNF40-211ENST00000567365 H0Y8G0 127 aa7.71□□□□□ -1.18
RNF40-211ENST00000567365 SYS1-DBNDD2H3BUS1 97 aa7.71□□□□□ -1.18
RNF40-211ENST00000567365 PLNP26678 52 aa7.71□□□□□ -1.18
RNF40-211ENST00000567365 DPM2O94777 84 aa7.7□□□□□ -1.18
RNF40-211ENST00000567365 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
RNF40-211ENST00000567365 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
RNF40-211ENST00000567365 XAGE1AQ9HD64 81 aa7.7□□□□□ -1.18
RNF40-211ENST00000567365 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
RNF40-211ENST00000567365 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
RNF40-211ENST00000567365 LINC01545Q5VT33 79 aa7.69□□□□□ -1.18
RNF40-211ENST00000567365 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
RNF40-211ENST00000567365 PHF5AQ7RTV0 110 aaKnown RBP7.69□□□□□ -1.18
RNF40-211ENST00000567365 KRTAP11-1Q8IUC1 163 aa7.69□□□□□ -1.18
RNF40-211ENST00000567365 TNXBP22105 4242 aa7.68□□□□□ -1.18
RNF40-211ENST00000567365 IGKCP01834 107 aa7.68□□□□□ -1.18
RNF40-211ENST00000567365 C3orf79P0CE67 100 aa7.68□□□□□ -1.18
RNF40-211ENST00000567365 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
RNF40-211ENST00000567365 PET117Q6UWS5 81 aa7.68□□□□□ -1.18
RNF40-211ENST00000567365 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
RNF40-211ENST00000567365 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
RNF40-211ENST00000567365 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
RNF40-211ENST00000567365 COX17Q14061 63 aa7.67□□□□□ -1.18
RNF40-211ENST00000567365 FAM19A5Q7Z5A7 132 aaPredicted RBP7.67□□□□□ -1.18
RNF40-211ENST00000567365 LEPROTO15243 131 aa7.66□□□□□ -1.18
RNF40-211ENST00000567365 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
RNF40-211ENST00000567365 IGLV5-37A0A075B6J1 123 aa7.65□□□□□ -1.18
RNF40-211ENST00000567365 M0QXV9 152 aa7.65□□□□□ -1.18
RNF40-211ENST00000567365 HIST3H2BBQ8N257 126 aa7.65□□□□□ -1.18
RNF40-211ENST00000567365 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
RNF40-211ENST00000567365 TP73-AS1Q9UF72 201 aa7.65□□□□□ -1.18
RNF40-211ENST00000567365 C22orf24Q9Y442 160 aa7.65□□□□□ -1.18
RNF40-211ENST00000567365 PFN2P35080 140 aa7.64□□□□□ -1.19
RNF40-211ENST00000567365 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNF40-211ENST00000567365 PLEKHB2Q96CS7 222 aa7.64□□□□□ -1.19
RNF40-211ENST00000567365 NDUFA12Q9UI09 145 aa7.64□□□□□ -1.19
RNF40-211ENST00000567365 E9PLD3 99 aa7.63□□□□□ -1.19
RNF40-211ENST00000567365 J3QQQ9 107 aa7.63□□□□□ -1.19
RNF40-211ENST00000567365 HERV-K104P63124 156 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms