RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 TRBV30A0A0K0K1B3 111 aa9.91□□□□□ -0.82
COMMD4-217ENST00000567195 H3BRM9 83 aa9.91□□□□□ -0.82
COMMD4-217ENST00000567195 SCO1O75880 301 aa9.91□□□□□ -0.82
COMMD4-217ENST00000567195 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
COMMD4-217ENST00000567195 C7orf33Q8WU49 177 aa9.91□□□□□ -0.82
COMMD4-217ENST00000567195 TLX1NBP0CAT3 122 aa9.9□□□□□ -0.82
COMMD4-217ENST00000567195 IGLC3P0DOY3 106 aa9.9□□□□□ -0.82
COMMD4-217ENST00000567195 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
COMMD4-217ENST00000567195 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
COMMD4-217ENST00000567195 IFI27L1Q96BM0 104 aa9.89□□□□□ -0.83
COMMD4-217ENST00000567195 SPINK8P0C7L1 97 aa9.88□□□□□ -0.83
COMMD4-217ENST00000567195 CXCL5P42830 114 aa9.88□□□□□ -0.83
COMMD4-217ENST00000567195 FAM19A2Q8N3H0 131 aa9.88□□□□□ -0.83
COMMD4-217ENST00000567195 SERF1AO75920 110 aa9.87□□□□□ -0.83
COMMD4-217ENST00000567195 COX7B2Q8TF08 81 aa9.87□□□□□ -0.83
COMMD4-217ENST00000567195 F8VRH5 84 aa9.86□□□□□ -0.83
COMMD4-217ENST00000567195 Q6ZRP5 223 aa9.86□□□□□ -0.83
COMMD4-217ENST00000567195 CHTOPQ9Y3Y2 248 aaKnown RBP9.86□□□□□ -0.83
COMMD4-217ENST00000567195 FLG2Q5D862 2391 aaPredicted RBP9.86□□□□□ -0.83
COMMD4-217ENST00000567195 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
COMMD4-217ENST00000567195 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
COMMD4-217ENST00000567195 ZNF22P17026 224 aaPredicted RBP9.85□□□□□ -0.83
COMMD4-217ENST00000567195 KRTAP10-4P60372 401 aaPredicted RBP9.85□□□□□ -0.83
COMMD4-217ENST00000567195 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
COMMD4-217ENST00000567195 C9orf116Q5BN46 136 aaPredicted RBP9.85□□□□□ -0.83
COMMD4-217ENST00000567195 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
COMMD4-217ENST00000567195 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
COMMD4-217ENST00000567195 A0A1W2PNN7 141 aa9.84□□□□□ -0.83
COMMD4-217ENST00000567195 LEPROTL1O95214 131 aa9.84□□□□□ -0.83
COMMD4-217ENST00000567195 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
COMMD4-217ENST00000567195 C11orf86A6NJI1 115 aa9.83□□□□□ -0.84
COMMD4-217ENST00000567195 LINC00310P59036 64 aa9.83□□□□□ -0.84
COMMD4-217ENST00000567195 J3QL48 77 aa9.82□□□□□ -0.84
COMMD4-217ENST00000567195 HSPB8Q9UJY1 196 aa9.82□□□□□ -0.84
COMMD4-217ENST00000567195 IGLV5-39A0A0G2JS06 123 aa9.81□□□□□ -0.84
COMMD4-217ENST00000567195 NUPR1O60356 82 aa9.81□□□□□ -0.84
COMMD4-217ENST00000567195 H0Y8G0 127 aa9.8□□□□□ -0.84
COMMD4-217ENST00000567195 FABP4P15090 132 aa9.8□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 S100A1P23297 94 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
COMMD4-217ENST00000567195 FAM19A5Q7Z5A7 132 aaPredicted RBP9.78□□□□□ -0.84
COMMD4-217ENST00000567195 FAM168BA1KXE4 195 aa9.77□□□□□ -0.85
COMMD4-217ENST00000567195 C9orf129Q5T035 196 aaKnown RBP9.77□□□□□ -0.85
COMMD4-217ENST00000567195 PHF5AQ7RTV0 110 aaKnown RBP9.77□□□□□ -0.85
COMMD4-217ENST00000567195 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
COMMD4-217ENST00000567195 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
COMMD4-217ENST00000567195 OXTP01178 125 aa9.76□□□□□ -0.85
COMMD4-217ENST00000567195 PRR3P79522 188 aaKnown RBP9.76□□□□□ -0.85
COMMD4-217ENST00000567195 ODF1Q14990 250 aa9.76□□□□□ -0.85
COMMD4-217ENST00000567195 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
COMMD4-217ENST00000567195 MAP1LC3CQ9BXW4 147 aa9.75□□□□□ -0.85
COMMD4-217ENST00000567195 XAGE1AQ9HD64 81 aa9.75□□□□□ -0.85
COMMD4-217ENST00000567195 M0QXV9 152 aa9.74□□□□□ -0.85
COMMD4-217ENST00000567195 HNRNPA3P51991 378 aaKnown RBP9.74□□□□□ -0.85
COMMD4-217ENST00000567195 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
COMMD4-217ENST00000567195 PLNP26678 52 aa9.73□□□□□ -0.85
COMMD4-217ENST00000567195 ATP6V1G1O75348 118 aa9.72□□□□□ -0.85
COMMD4-217ENST00000567195 PFN2P35080 140 aa9.72□□□□□ -0.85
COMMD4-217ENST00000567195 DPM2O94777 84 aa9.71□□□□□ -0.86
COMMD4-217ENST00000567195 UBE2BP63146 152 aa9.71□□□□□ -0.86
COMMD4-217ENST00000567195 COX17Q14061 63 aa9.71□□□□□ -0.86
COMMD4-217ENST00000567195 KRTAP7-1Q8IUC3 87 aa9.71□□□□□ -0.86
COMMD4-217ENST00000567195 ZNF625Q96I27 306 aaPredicted RBP9.71□□□□□ -0.86
COMMD4-217ENST00000567195 PSORS1C2Q9UIG4 136 aa9.71□□□□□ -0.86
COMMD4-217ENST00000567195 ERG28Q9UKR5 140 aa9.71□□□□□ -0.86
COMMD4-217ENST00000567195 IGKCP01834 107 aa9.7□□□□□ -0.86
COMMD4-217ENST00000567195 HERVK_113P61574 105 aa9.69□□□□□ -0.86
COMMD4-217ENST00000567195 LBHQ53QV2 105 aaPredicted RBP9.69□□□□□ -0.86
COMMD4-217ENST00000567195 C1orf137Q5JT78 98 aa9.69□□□□□ -0.86
COMMD4-217ENST00000567195 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
COMMD4-217ENST00000567195 PMCHL2Q9BQD1 86 aa9.69□□□□□ -0.86
COMMD4-217ENST00000567195 C22orf24Q9Y442 160 aa9.69□□□□□ -0.86
COMMD4-217ENST00000567195 COA6Q5JTJ3 125 aaKnown RBP9.68□□□□□ -0.86
COMMD4-217ENST00000567195 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
COMMD4-217ENST00000567195 SYS1-DBNDD2H3BUS1 97 aa9.67□□□□□ -0.86
COMMD4-217ENST00000567195 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
COMMD4-217ENST00000567195 TP73-AS1Q9UF72 201 aa9.67□□□□□ -0.86
COMMD4-217ENST00000567195 LEPROTO15243 131 aa9.66□□□□□ -0.86
COMMD4-217ENST00000567195 LINC00158P58513 81 aa9.66□□□□□ -0.86
COMMD4-217ENST00000567195 HERV-K104P63124 156 aa9.66□□□□□ -0.86
COMMD4-217ENST00000567195 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
COMMD4-217ENST00000567195 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
COMMD4-217ENST00000567195 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
COMMD4-217ENST00000567195 MRPL55Q7Z7F7 128 aaKnown RBP9.65□□□□□ -0.86
COMMD4-217ENST00000567195 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
COMMD4-217ENST00000567195 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
COMMD4-217ENST00000567195 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
COMMD4-217ENST00000567195 SRSF9Q13242 221 aaKnown RBP eCLIP9.64□□□□□ -0.87
COMMD4-217ENST00000567195 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
COMMD4-217ENST00000567195 REG3GQ6UW15 175 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms