RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 TRBV7-4A0A0J9YYF1 115 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 TRBV6-5A0A0K0K1A5 114 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 A0A1W2PNM2 257 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 IGHV3-53P01767 116 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 ARL14EPLP0DKL9 152 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 RPL38P63173 70 aaKnown RBP1.44□□□□□ -2.18
PALB2-204ENST00000566069 NREPQ16612 68 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 KRTAP25-1Q3LHN0 102 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 MUC7Q8TAX7 377 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 MRPL36Q9P0J6 103 aaKnown RBP1.44□□□□□ -2.18
PALB2-204ENST00000566069 C22orf24Q9Y442 160 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 ALPK2Q86TB3 2170 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 CR1P17927 2039 aa1.44□□□□□ -2.18
PALB2-204ENST00000566069 SHPRHQ149N8 1683 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 ARFGEF3Q5TH69 2177 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 INTS1Q8N201 2190 aaKnown RBP1.43□□□□□ -2.18
PALB2-204ENST00000566069 IGLV10-54A0A075B6I4 117 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 IGKV1D-37A0A075B6S9 117 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 A0A087WSZ3 146 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 TRAV12-1A0A0B4J245 112 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 A0A1B0GUT8 65 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 CLPSL1A2RUU4 121 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 LINC01546A6NGU7 62 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 F8VRH5 84 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 FAM74A4Q5TZK3 123 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 HIGD2AQ9BW72 106 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 TTTY10Q9BZA0 68 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 UBL5Q9BZL1 73 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 TMEM167BQ9NRX6 74 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 LRP6O75581 1613 aa1.43□□□□□ -2.18
PALB2-204ENST00000566069 DDX60Q8IY21 1712 aaKnown RBP1.43□□□□□ -2.18
PALB2-204ENST00000566069 C3P01024 1663 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 SCN7AQ01118 1682 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 RREB1Q92766 1687 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 SLIT1O75093 1534 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 IAPPP10997 89 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 RNASE3P12724 160 aaKnown RBP1.42□□□□□ -2.18
PALB2-204ENST00000566069 ELOF1P60002 83 aaKnown RBP1.42□□□□□ -2.18
PALB2-204ENST00000566069 SPANXN5Q5MJ07 72 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 OBSCN-AS1Q96MR7 158 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 TMEM14CQ9P0S9 112 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 LHFPL6Q9Y693 200 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 LY75O60449 1722 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 RICTORQ6R327 1708 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.42□□□□□ -2.18
PALB2-204ENST00000566069 NHSQ6T4R5 1651 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 ADAMTS7Q9UKP4 1686 aa1.42□□□□□ -2.18
PALB2-204ENST00000566069 MED12Q93074 2177 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 NRXN3Q9Y4C0 1643 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 TIAM2Q8IVF5 1701 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 TOGARAM1Q9Y4F4 1720 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 TNRC6BQ9UPQ9 1833 aaKnown RBP1.41□□□□□ -2.18
PALB2-204ENST00000566069 TRBV10-1A0A0K0K1A3 114 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 M0R135 149 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 COX6B1P14854 86 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 SPINK7P58062 85 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 FXYD4P59646 89 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 HAMPP81172 84 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.41□□□□□ -2.18
PALB2-204ENST00000566069 ZNF833PQ6ZTB9 187 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 LENEPQ9Y5L5 61 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 LINC01558Q9Y6Z2 57 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 SPAG17Q6Q759 2223 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 SDK1Q7Z5N4 2213 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
PALB2-204ENST00000566069 PARP4Q9UKK3 1724 aaKnown RBP1.4□□□□□ -2.18
PALB2-204ENST00000566069 ERCC6L2Q5T890 1561 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 IGHV3-64A0A075B6Q5 118 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 A0A0J9YX75 114 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 H3BSH0 61 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 NDUFB1O75438 58 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 CNBPP62633 177 aaKnown RBP1.4□□□□□ -2.19
PALB2-204ENST00000566069 ERHP84090 104 aaKnown RBP1.4□□□□□ -2.19
PALB2-204ENST00000566069 TFF3Q07654 80 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 C1orf137Q5JT78 98 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 C10orf113Q5VZT2 155 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 COX7B2Q8TF08 81 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 ARHGAP5-AS1Q96IT6 56 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 LINC00208Q96KT6 92 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 TTTY12Q9BZ98 90 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 WFDC10AQ9H1F0 79 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 R4GMQ9 66 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 CEP192Q8TEP8 1941 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 ABCA4P78363 2273 aa1.4□□□□□ -2.19
PALB2-204ENST00000566069 TNCP24821 2201 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
PALB2-204ENST00000566069 UNC13CQ8NB66 2214 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 DUOX1Q9NRD9 1551 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 ODF3BA8MYP8 253 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 LOC730098B7Z3J9 87 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 JMJD7-PLA2G4BH0Y9G9 81 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 C9orf163Q8N9P6 203 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 GAFA1Q96PS6 74 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 Q9BRP9 147 aa1.39□□□□□ -2.19
PALB2-204ENST00000566069 DOT1LQ8TEK3 1739 aa1.38□□□□□ -2.19
PALB2-204ENST00000566069 IGKV3-7A0A075B6H7 116 aa1.38□□□□□ -2.19
PALB2-204ENST00000566069 TRBV6-1A0A0K0K1D8 114 aa1.38□□□□□ -2.19
PALB2-204ENST00000566069 NUPR2A6NF83 97 aa1.38□□□□□ -2.19
PALB2-204ENST00000566069 H0YGX0 51 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms