RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 MAJINQ3KP22 176 aa8.03□□□□□ -1.12
SHCBP1-204ENST00000565887 COA6Q5JTJ3 125 aaKnown RBP8.03□□□□□ -1.12
SHCBP1-204ENST00000565887 TMEM170BQ5T4T1 132 aa8.03□□□□□ -1.12
SHCBP1-204ENST00000565887 COX7B2Q8TF08 81 aa8.03□□□□□ -1.12
SHCBP1-204ENST00000565887 MAP1LC3CQ9BXW4 147 aa8.03□□□□□ -1.12
SHCBP1-204ENST00000565887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.03□□□□□ -1.12
SHCBP1-204ENST00000565887 RYR1P21817 5038 aa8.02□□□□□ -1.13
SHCBP1-204ENST00000565887 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.13
SHCBP1-204ENST00000565887 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
SHCBP1-204ENST00000565887 FABP4P15090 132 aa8.02□□□□□ -1.13
SHCBP1-204ENST00000565887 ZNF22P17026 224 aaPredicted RBP8.02□□□□□ -1.13
SHCBP1-204ENST00000565887 PTTG1IPP53801 180 aa8.02□□□□□ -1.13
SHCBP1-204ENST00000565887 PLAC8Q9NZF1 115 aa8.02□□□□□ -1.13
SHCBP1-204ENST00000565887 A0A087WYN8 130 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 A0A096LNI7 61 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 SPINK8P0C7L1 97 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 PLNP26678 52 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 GAGE2BQ13066 116 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 C10orf25Q5T742 122 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 C2orf82Q6UX34 121 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
SHCBP1-204ENST00000565887 NDUFC2-KCTD14E9PQ53 114 aa8□□□□□ -1.13
SHCBP1-204ENST00000565887 STPG4Q8N801 248 aa8□□□□□ -1.13
SHCBP1-204ENST00000565887 PANO1I0J062 215 aa7.99□□□□□ -1.13
SHCBP1-204ENST00000565887 CHTF8P0CG12 524 aa7.99□□□□□ -1.13
SHCBP1-204ENST00000565887 HAMPP81172 84 aa7.99□□□□□ -1.13
SHCBP1-204ENST00000565887 RPL18AQ02543 176 aaKnown RBP7.99□□□□□ -1.13
SHCBP1-204ENST00000565887 ODF1Q14990 250 aa7.99□□□□□ -1.13
SHCBP1-204ENST00000565887 H0Y8G0 127 aa7.98□□□□□ -1.13
SHCBP1-204ENST00000565887 Q5VSD8 79 aa7.98□□□□□ -1.13
SHCBP1-204ENST00000565887 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
SHCBP1-204ENST00000565887 C7orf33Q8WU49 177 aa7.98□□□□□ -1.13
SHCBP1-204ENST00000565887 HERC2O95714 4834 aa7.98□□□□□ -1.13
SHCBP1-204ENST00000565887 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
SHCBP1-204ENST00000565887 TMEM223A0PJW6 202 aa7.97□□□□□ -1.13
SHCBP1-204ENST00000565887 DPM2O94777 84 aa7.97□□□□□ -1.13
SHCBP1-204ENST00000565887 Q6ZRP5 223 aa7.97□□□□□ -1.13
SHCBP1-204ENST00000565887 HSPG2P98160 4391 aa7.96□□□□□ -1.13
SHCBP1-204ENST00000565887 DNAH8Q96JB1 4490 aa7.96□□□□□ -1.14
SHCBP1-204ENST00000565887 IGKCP01834 107 aa7.96□□□□□ -1.14
SHCBP1-204ENST00000565887 AKR1D1P51857 326 aa7.96□□□□□ -1.14
SHCBP1-204ENST00000565887 HERVK_113P61574 105 aa7.96□□□□□ -1.14
SHCBP1-204ENST00000565887 COX17Q14061 63 aa7.96□□□□□ -1.14
SHCBP1-204ENST00000565887 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
SHCBP1-204ENST00000565887 SYS1-DBNDD2H3BUS1 97 aa7.95□□□□□ -1.14
SHCBP1-204ENST00000565887 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
SHCBP1-204ENST00000565887 PET117Q6UWS5 81 aa7.95□□□□□ -1.14
SHCBP1-204ENST00000565887 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
SHCBP1-204ENST00000565887 S100A6P06703 90 aa7.94□□□□□ -1.14
SHCBP1-204ENST00000565887 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
SHCBP1-204ENST00000565887 HERV-K104P63124 156 aa7.93□□□□□ -1.14
SHCBP1-204ENST00000565887 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
SHCBP1-204ENST00000565887 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
SHCBP1-204ENST00000565887 MYMXA0A1B0GTQ4 84 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 C20orf202A1L168 122 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 LEPROTO15243 131 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 S100A2P29034 98 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 LINC01545Q5VT33 79 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 ZNF625Q96I27 306 aaPredicted RBP7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 KRTAP17-1Q9BYP8 105 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 ERG28Q9UKR5 140 aa7.91□□□□□ -1.14
SHCBP1-204ENST00000565887 C3orf79P0CE67 100 aa7.9□□□□□ -1.14
SHCBP1-204ENST00000565887 INAFM2P0DMQ5 153 aa7.9□□□□□ -1.14
SHCBP1-204ENST00000565887 NMUP48645 174 aa7.9□□□□□ -1.14
SHCBP1-204ENST00000565887 KRTAP4-5Q9BYR2 181 aa7.9□□□□□ -1.14
SHCBP1-204ENST00000565887 SRRM2Q9UQ35 2752 aaKnown RBP7.9□□□□□ -1.15
SHCBP1-204ENST00000565887 KRTDAPP60985 99 aa7.89□□□□□ -1.15
SHCBP1-204ENST00000565887 LBHQ53QV2 105 aaPredicted RBP7.89□□□□□ -1.15
SHCBP1-204ENST00000565887 PMCHL2Q9BQD1 86 aa7.89□□□□□ -1.15
SHCBP1-204ENST00000565887 NDUFA12Q9UI09 145 aa7.89□□□□□ -1.15
SHCBP1-204ENST00000565887 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
SHCBP1-204ENST00000565887 J3QQQ9 107 aa7.88□□□□□ -1.15
SHCBP1-204ENST00000565887 PFN2P35080 140 aa7.88□□□□□ -1.15
SHCBP1-204ENST00000565887 C9orf129Q5T035 196 aaKnown RBP7.88□□□□□ -1.15
SHCBP1-204ENST00000565887 E9PLD3 99 aa7.87□□□□□ -1.15
SHCBP1-204ENST00000565887 LGALS3P17931 250 aaKnown RBP7.87□□□□□ -1.15
SHCBP1-204ENST00000565887 LINC00158P58513 81 aa7.87□□□□□ -1.15
SHCBP1-204ENST00000565887 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
SHCBP1-204ENST00000565887 XAGE1AQ9HD64 81 aa7.87□□□□□ -1.15
SHCBP1-204ENST00000565887 TP73-AS1Q9UF72 201 aa7.87□□□□□ -1.15
SHCBP1-204ENST00000565887 RPL24P83731 157 aaKnown RBP7.86□□□□□ -1.15
SHCBP1-204ENST00000565887 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
SHCBP1-204ENST00000565887 VPS13BQ7Z7G8 4022 aa7.86□□□□□ -1.15
SHCBP1-204ENST00000565887 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
SHCBP1-204ENST00000565887 M0QXV9 152 aa7.85□□□□□ -1.15
SHCBP1-204ENST00000565887 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
SHCBP1-204ENST00000565887 SNRPEP62304 92 aaKnown RBP7.85□□□□□ -1.15
SHCBP1-204ENST00000565887 MEIG1Q5JSS6 88 aa7.85□□□□□ -1.15
SHCBP1-204ENST00000565887 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
SHCBP1-204ENST00000565887 PHF5AQ7RTV0 110 aaKnown RBP7.84□□□□□ -1.15
SHCBP1-204ENST00000565887 HIST1H2BLQ99880 126 aa7.84□□□□□ -1.15
SHCBP1-204ENST00000565887 SND1-IT1Q9HBX3 110 aa7.84□□□□□ -1.15
SHCBP1-204ENST00000565887 IGLV5-37A0A075B6J1 123 aa7.83□□□□□ -1.16
SHCBP1-204ENST00000565887 UBE2BP63146 152 aa7.83□□□□□ -1.16
SHCBP1-204ENST00000565887 PRR3P79522 188 aaKnown RBP7.83□□□□□ -1.16
SHCBP1-204ENST00000565887 NKAPP1Q8N9T2 125 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms