RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 C9orf163Q8N9P6 203 aa16.81■□□□□ 0.28
NME3-208ENST00000565379 CAMK2N2Q96S95 79 aa16.81■□□□□ 0.28
NME3-208ENST00000565379 HIST1H2BLQ99880 126 aa16.81■□□□□ 0.28
NME3-208ENST00000565379 SLPIP03973 132 aa16.8■□□□□ 0.28
NME3-208ENST00000565379 PKIGQ9Y2B9 76 aa16.8■□□□□ 0.28
NME3-208ENST00000565379 NDUFA1O15239 70 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 IGKCP01834 107 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 SPINK8P0C7L1 97 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 AKR1D1P51857 326 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 KRTDAPP60985 99 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 KIAA0087Q14695 138 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 C6orf226Q5I0X4 101 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 LINC01545Q5VT33 79 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 CARD19Q96LW7 228 aa16.79■□□□□ 0.28
NME3-208ENST00000565379 C20orf202A1L168 122 aa16.78■□□□□ 0.28
NME3-208ENST00000565379 CXCL5P42830 114 aa16.78■□□□□ 0.28
NME3-208ENST00000565379 LINC00526Q96FQ7 95 aa16.78■□□□□ 0.28
NME3-208ENST00000565379 TOMM7Q9P0U1 55 aa16.78■□□□□ 0.28
NME3-208ENST00000565379 IGLV5-39A0A0G2JS06 123 aa16.77■□□□□ 0.28
NME3-208ENST00000565379 TMEM223A0PJW6 202 aa16.76■□□□□ 0.27
NME3-208ENST00000565379 CKS1BP61024 79 aa16.76■□□□□ 0.27
NME3-208ENST00000565379 RNF151Q2KHN1 245 aa16.76■□□□□ 0.27
NME3-208ENST00000565379 COX7B2Q8TF08 81 aa16.76■□□□□ 0.27
NME3-208ENST00000565379 INAFM2P0DMQ5 153 aa16.74■□□□□ 0.27
NME3-208ENST00000565379 Q6ZRU5 148 aa16.74■□□□□ 0.27
NME3-208ENST00000565379 PMCHL2Q9BQD1 86 aa16.74■□□□□ 0.27
NME3-208ENST00000565379 SMR3BP02814 79 aaPredicted RBP16.72■□□□□ 0.27
NME3-208ENST00000565379 HERVK_113P61574 105 aa16.72■□□□□ 0.27
NME3-208ENST00000565379 SFTA2Q6UW10 78 aa16.72■□□□□ 0.27
NME3-208ENST00000565379 TRBV30A0A0K0K1B3 111 aa16.71■□□□□ 0.27
NME3-208ENST00000565379 FAM30AQ9NZY2 134 aa16.71■□□□□ 0.27
NME3-208ENST00000565379 DMBT1Q9UGM3 2413 aaPredicted RBP16.7■□□□□ 0.26
NME3-208ENST00000565379 HERC1Q15751 4861 aa16.69■□□□□ 0.26
NME3-208ENST00000565379 Q5VSD8 79 aa16.69■□□□□ 0.26
NME3-208ENST00000565379 UNQ6190/PRO20217Q6UXQ8 127 aa16.69■□□□□ 0.26
NME3-208ENST00000565379 SRRM2Q9UQ35 2752 aaKnown RBP16.68■□□□□ 0.26
NME3-208ENST00000565379 SDIM1Q6ZPB5 146 aa16.68■□□□□ 0.26
NME3-208ENST00000565379 C2orf82Q6UX34 121 aa16.67■□□□□ 0.26
NME3-208ENST00000565379 TMA7Q9Y2S6 64 aaKnown RBP16.67■□□□□ 0.26
NME3-208ENST00000565379 MYCBP2O75592 4640 aa16.67■□□□□ 0.26
NME3-208ENST00000565379 LINC01620Q4KN68 170 aa16.66■□□□□ 0.26
NME3-208ENST00000565379 FLG2Q5D862 2391 aaPredicted RBP16.66■□□□□ 0.26
NME3-208ENST00000565379 LOC107984640A0A0U1RRK4 108 aa16.65■□□□□ 0.26
NME3-208ENST00000565379 C10orf25Q5T742 122 aa16.65■□□□□ 0.26
NME3-208ENST00000565379 PLEKHB2Q96CS7 222 aa16.65■□□□□ 0.26
NME3-208ENST00000565379 C6orf48Q9UBA6 75 aa16.65■□□□□ 0.26
NME3-208ENST00000565379 LEPROTO15243 131 aa16.63■□□□□ 0.25
NME3-208ENST00000565379 TLX1NBP0CAT3 122 aa16.62■□□□□ 0.25
NME3-208ENST00000565379 LINC00474Q9P2X8 69 aa16.62■□□□□ 0.25
NME3-208ENST00000565379 Q6ZSA8 131 aa16.61■□□□□ 0.25
NME3-208ENST00000565379 E9PLD3 99 aa16.6■□□□□ 0.25
NME3-208ENST00000565379 ZNF625Q96I27 306 aaPredicted RBP16.58■□□□□ 0.24
NME3-208ENST00000565379 NDUFC2-KCTD14E9PQ53 114 aa16.57■□□□□ 0.24
NME3-208ENST00000565379 FAM229AH3BQW9 127 aa16.57■□□□□ 0.24
NME3-208ENST00000565379 NMUP48645 174 aa16.57■□□□□ 0.24
NME3-208ENST00000565379 J3QQQ9 107 aa16.56■□□□□ 0.24
NME3-208ENST00000565379 LGALS3P17931 250 aaKnown RBP16.56■□□□□ 0.24
NME3-208ENST00000565379 HERV-K104P63124 156 aa16.56■□□□□ 0.24
NME3-208ENST00000565379 CIRBPQ14011 172 aaKnown RBP16.56■□□□□ 0.24
NME3-208ENST00000565379 MYMXA0A1B0GTQ4 84 aa16.55■□□□□ 0.24
NME3-208ENST00000565379 PTTG1IPP53801 180 aa16.55■□□□□ 0.24
NME3-208ENST00000565379 RPL18AQ02543 176 aaKnown RBP16.55■□□□□ 0.24
NME3-208ENST00000565379 STPG4Q8N801 248 aa16.55■□□□□ 0.24
NME3-208ENST00000565379 NDUFA12Q9UI09 145 aa16.55■□□□□ 0.24
NME3-208ENST00000565379 SCGB1D1O95968 90 aa16.54■□□□□ 0.24
NME3-208ENST00000565379 A0A096LNI7 61 aa16.53■□□□□ 0.24
NME3-208ENST00000565379 LINC00587B1AMM8 73 aa16.53■□□□□ 0.24
NME3-208ENST00000565379 GAGE2BQ13066 116 aa16.53■□□□□ 0.24
NME3-208ENST00000565379 COX17Q14061 63 aa16.53■□□□□ 0.24
NME3-208ENST00000565379 C9orf116Q5BN46 136 aaPredicted RBP16.53■□□□□ 0.24
NME3-208ENST00000565379 SPACA4Q8TDM5 124 aa16.52■□□□□ 0.24
NME3-208ENST00000565379 Q6ZRP5 223 aa16.51■□□□□ 0.23
NME3-208ENST00000565379 ATOH7Q8N100 152 aa16.51■□□□□ 0.23
NME3-208ENST00000565379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.51■□□□□ 0.23
NME3-208ENST00000565379 IGKV2-24A0A0C4DH68 120 aa16.5■□□□□ 0.23
NME3-208ENST00000565379 HSBP1L1C9JCN9 74 aa16.5■□□□□ 0.23
NME3-208ENST00000565379 TSPEAR-AS2P59090 65 aa16.5■□□□□ 0.23
NME3-208ENST00000565379 DPH3Q96FX2 82 aa16.5■□□□□ 0.23
NME3-208ENST00000565379 ERG28Q9UKR5 140 aa16.5■□□□□ 0.23
NME3-208ENST00000565379 MAJINQ3KP22 176 aa16.49■□□□□ 0.23
NME3-208ENST00000565379 CHTF8P0CG12 524 aa16.47■□□□□ 0.23
NME3-208ENST00000565379 JOSD1Q15040 202 aaPredicted RBP16.46■□□□□ 0.23
NME3-208ENST00000565379 GAGE2EQ4V326 116 aa16.46■□□□□ 0.23
NME3-208ENST00000565379 GAGE2DQ9UEU5 116 aa16.46■□□□□ 0.23
NME3-208ENST00000565379 SCXQ7RTU7 201 aa16.45■□□□□ 0.22
NME3-208ENST00000565379 PANO1I0J062 215 aa16.44■□□□□ 0.22
NME3-208ENST00000565379 PFN2P35080 140 aa16.44■□□□□ 0.22
NME3-208ENST00000565379 MEIG1Q5JSS6 88 aa16.44■□□□□ 0.22
NME3-208ENST00000565379 ANKRD39Q53RE8 183 aa16.43■□□□□ 0.22
NME3-208ENST00000565379 LINC00528Q8N1L1 170 aa16.43■□□□□ 0.22
NME3-208ENST00000565379 CIRBP-AS1Q8TBR5 109 aa16.43■□□□□ 0.22
NME3-208ENST00000565379 A0A087WYN8 130 aa16.42■□□□□ 0.22
NME3-208ENST00000565379 IGKV2D-26A0A0A0MRZ7 120 aa16.42■□□□□ 0.22
NME3-208ENST00000565379 PLAC8Q9NZF1 115 aa16.42■□□□□ 0.22
NME3-208ENST00000565379 LINC00158P58513 81 aa16.41■□□□□ 0.22
NME3-208ENST00000565379 ZNF815PA8K554 130 aa16.39■□□□□ 0.21
NME3-208ENST00000565379 SMIM13P0DJ93 91 aa16.37■□□□□ 0.21
NME3-208ENST00000565379 C9orf129Q5T035 196 aaKnown RBP16.37■□□□□ 0.21
NME3-208ENST00000565379 A0A0J9YXY3 114 aa16.36■□□□□ 0.21
NME3-208ENST00000565379 J3QL48 77 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms