RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	RRN3P1	Q2M238	152 aa		3.1	□□□□□ -1.91
BBS4-208	ENST00000565160		Q6ZVH6	145 aa		3.1	□□□□□ -1.91
BBS4-208	ENST00000565160	NEGR1	Q7Z3B1	354 aa		3.1	□□□□□ -1.91
BBS4-208	ENST00000565160	DLX4	Q92988	240 aa	Predicted RBP	3.1	□□□□□ -1.91
BBS4-208	ENST00000565160	SPANXB1	Q9NS25	103 aa	Predicted RBP	3.1	□□□□□ -1.91
BBS4-208	ENST00000565160	TP73-AS1	Q9UF72	201 aa		3.1	□□□□□ -1.91
BBS4-208	ENST00000565160	KIF25-AS1	Q9Y6Z4	181 aa		3.1	□□□□□ -1.91
BBS4-208	ENST00000565160	TRAV12-2	A0A075B6T6	113 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	IGKV2D-26	A0A0A0MRZ7	120 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160		A0A1B0GWB2	263 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160		J3QQQ9	107 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	CRYGD	P07320	174 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	COX6C	P09669	75 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	HTN1	P15515	57 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	FXYD2	P54710	66 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	UFSP1	Q6NVU6	142 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	C20orf203	Q8NBC4	194 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	KLHL30-AS1	Q8NEE0	82 aa		3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	GEMIN7	Q9H840	131 aa	Known RBP	3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	TSSC4	Q9Y5U2	329 aa	Predicted RBP	3.09	□□□□□ -1.91
BBS4-208	ENST00000565160	TRBV7-3	A0A075B6L6	115 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	TRBV10-1	A0A0K0K1A3	114 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	TINCR	A0A1B0GVN0	87 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	KNCN	A6PVL3	124 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160		A8MTW9	85 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	IFITM1	P13164	125 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	LINC00315	P59091	139 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	HERV-K104	P63124	156 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	DAZ2	Q13117	558 aa	Known RBP	3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	DEFB114	Q30KQ6	69 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160		Q6ZQT7	251 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160		Q6ZVQ6	151 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	DAZ4	Q86SG3	579 aa	Known RBP	3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	SLC25A29	Q8N8R3	303 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	TMEM101	Q96IK0	257 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	TIMM21	Q9BVV7	248 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	DAZ3	Q9NR90	486 aa	Known RBP	3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	ERG28	Q9UKR5	140 aa		3.08	□□□□□ -1.92
BBS4-208	ENST00000565160	LOC107984156	A0A0G2JMH3	177 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160		A0A0U1RRA0	63 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	TMEM223	A0PJW6	202 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	TMEM262	E9PQX1	116 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160		K7ERJ3	54 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	UBE2L6	O14933	153 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	RTL8C	O15255	209 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	IGHV3-53	P01767	116 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	SCGB1A1	P11684	91 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	PSMB2	P49721	201 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	DEFB1	P60022	68 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	RBX1	P62877	108 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	MRPS36	P82909	103 aa	Known RBP	3.07	□□□□□ -1.92
BBS4-208	ENST00000565160		Q1RN00	199 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	AMTN	Q6UX39	209 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	LINC00336	Q6ZUF6	198 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	ARL17A	Q8IVW1	177 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	ATP6V0E2	Q8NHE4	81 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	PRO1854	Q9UHT4	67 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	FSIP2	Q5CZC0	6907 aa		3.07	□□□□□ -1.92
BBS4-208	ENST00000565160	IGLV4-69	A0A075B6H9	119 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	IGLV4-3	A0A075B6K6	122 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	TRAV4	A0A0B4J268	109 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160		A0A0B4J2C4	111 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	IGHV1-58	A0A0C4DH39	117 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160		A0A0J9YXY3	114 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160		A0A0J9YY99	117 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160		H3BMG7	143 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160		M0QXV9	152 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	RS1	O15537	224 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	TIMM17B	O60830	172 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	APOM	O95445	188 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	INAFM2	P0DMQ5	153 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	AZU1	P20160	251 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	UBE2D1	P51668	147 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	RPL39	P62891	51 aa	Known RBP	3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	HERVK_113	P63121	156 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	ATXN8	Q156A1	80 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	CFAP126	Q5VTH2	177 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	MORN3	Q6PF18	240 aa	Predicted RBP	3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	SFTA2	Q6UW10	78 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	TMEM61	Q8N0U2	210 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	MTURN	Q8N3F0	131 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	C16orf74	Q96GX8	76 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	AMELX	Q99217	191 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	SIGMAR1	Q99720	223 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	JPT2	Q9H910	190 aa		3.06	□□□□□ -1.92
BBS4-208	ENST00000565160	TRGV1	A0A0A0MS02	117 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	IGHV3-30	P01768	117 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	IGHV3-30-5	P0DP03	117 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	ZNF22	P17026	224 aa	Predicted RBP	3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	C10orf99	Q6UWK7	81 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	C10orf126	Q8N4M7	172 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	TMEM263	Q8WUH6	116 aa	Known RBP	3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	PPDPFL	Q8WWR9	84 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	NAA38	Q9BRA0	125 aa	Known RBP	3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	CHCHD5	Q9BSY4	110 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	TTTY13	Q9BZ97	58 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	GTSF1L	Q9H1H1	148 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	NDUFA12	Q9UI09	145 aa		3.05	□□□□□ -1.92
BBS4-208	ENST00000565160	CSDC2	Q9Y534	153 aa	Known RBP	3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms