RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 IGKCP01834 107 aa12.13□□□□□ -0.47
NME3-207ENST00000564628 S100A12P80511 92 aa12.13□□□□□ -0.47
NME3-207ENST00000564628 MRPL35Q9NZE8 188 aaKnown RBP12.13□□□□□ -0.47
NME3-207ENST00000564628 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
NME3-207ENST00000564628 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
NME3-207ENST00000564628 HSBP1L1C9JCN9 74 aa12.11□□□□□ -0.47
NME3-207ENST00000564628 RPL37AP61513 92 aaKnown RBP12.11□□□□□ -0.47
NME3-207ENST00000564628 HIGD2BQ4VC39 106 aa12.11□□□□□ -0.47
NME3-207ENST00000564628 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
NME3-207ENST00000564628 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
NME3-207ENST00000564628 UBE2D1P51668 147 aa12.1□□□□□ -0.47
NME3-207ENST00000564628 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
NME3-207ENST00000564628 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
NME3-207ENST00000564628 TINCRA0A1B0GVN0 87 aa12.09□□□□□ -0.47
NME3-207ENST00000564628 COX7A2LO14548 114 aa12.09□□□□□ -0.47
NME3-207ENST00000564628 GEMIN7Q9H840 131 aaKnown RBP12.09□□□□□ -0.47
NME3-207ENST00000564628 PKHD1L1Q86WI1 4243 aa12.08□□□□□ -0.48
NME3-207ENST00000564628 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.48
NME3-207ENST00000564628 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
NME3-207ENST00000564628 LINC00518Q8N0U6 118 aa12.08□□□□□ -0.48
NME3-207ENST00000564628 C12orf57Q99622 126 aa12.08□□□□□ -0.48
NME3-207ENST00000564628 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
NME3-207ENST00000564628 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
NME3-207ENST00000564628 HERVK_113P63121 156 aa12.07□□□□□ -0.48
NME3-207ENST00000564628 ATOH7Q8N100 152 aa12.07□□□□□ -0.48
NME3-207ENST00000564628 VAMP8Q9BV40 100 aa12.07□□□□□ -0.48
NME3-207ENST00000564628 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
NME3-207ENST00000564628 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
NME3-207ENST00000564628 CIRBPQ14011 172 aaKnown RBP12.05□□□□□ -0.48
NME3-207ENST00000564628 LINC00242Q5T6M2 205 aa12.05□□□□□ -0.48
NME3-207ENST00000564628 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
NME3-207ENST00000564628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.05□□□□□ -0.48
NME3-207ENST00000564628 C11orf86A6NJI1 115 aa12.04□□□□□ -0.48
NME3-207ENST00000564628 H3BRM9 83 aa12.04□□□□□ -0.48
NME3-207ENST00000564628 PANO1I0J062 215 aa12.04□□□□□ -0.48
NME3-207ENST00000564628 MALP21145 153 aa12.04□□□□□ -0.48
NME3-207ENST00000564628 HERVK_113P61574 105 aa12.04□□□□□ -0.48
NME3-207ENST00000564628 TMEM170BQ5T4T1 132 aa12.04□□□□□ -0.48
NME3-207ENST00000564628 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
NME3-207ENST00000564628 ZNF561-AS1K7EIQ3 104 aa12.02□□□□□ -0.49
NME3-207ENST00000564628 APOMO95445 188 aa12.02□□□□□ -0.49
NME3-207ENST00000564628 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
NME3-207ENST00000564628 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
NME3-207ENST00000564628 STPG4Q8N801 248 aa12.01□□□□□ -0.49
NME3-207ENST00000564628 CARD19Q96LW7 228 aa12.01□□□□□ -0.49
NME3-207ENST00000564628 A0A087WZ39 114 aa12□□□□□ -0.49
NME3-207ENST00000564628 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
NME3-207ENST00000564628 COX6A2Q02221 97 aa12□□□□□ -0.49
NME3-207ENST00000564628 SYCNQ0VAF6 134 aa12□□□□□ -0.49
NME3-207ENST00000564628 SPATA45Q537H7 98 aa12□□□□□ -0.49
NME3-207ENST00000564628 C2orf48Q96LS8 159 aa12□□□□□ -0.49
NME3-207ENST00000564628 PAM16Q9Y3D7 125 aa12□□□□□ -0.49
NME3-207ENST00000564628 MT1HL1P0DM35 61 aa11.99□□□□□ -0.49
NME3-207ENST00000564628 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
NME3-207ENST00000564628 CHTF8P0CG12 524 aa11.98□□□□□ -0.49
NME3-207ENST00000564628 SPAG11BQ08648 103 aa11.98□□□□□ -0.49
NME3-207ENST00000564628 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
NME3-207ENST00000564628 Q6ZRU5 148 aa11.98□□□□□ -0.49
NME3-207ENST00000564628 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
NME3-207ENST00000564628 CDKN2A-AS1Q9UH64 79 aa11.98□□□□□ -0.49
NME3-207ENST00000564628 LINC01561Q8N1V8 128 aa11.97□□□□□ -0.49
NME3-207ENST00000564628 ORAOV1Q8WV07 137 aa11.97□□□□□ -0.49
NME3-207ENST00000564628 E9PLD3 99 aa11.96□□□□□ -0.49
NME3-207ENST00000564628 F8WDY8 70 aa11.95□□□□□ -0.5
NME3-207ENST00000564628 CAMK2N2Q96S95 79 aa11.95□□□□□ -0.5
NME3-207ENST00000564628 PKIGQ9Y2B9 76 aa11.95□□□□□ -0.5
NME3-207ENST00000564628 A0A096LNI7 61 aa11.94□□□□□ -0.5
NME3-207ENST00000564628 KIAA0087Q14695 138 aa11.94□□□□□ -0.5
NME3-207ENST00000564628 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
NME3-207ENST00000564628 PLEKHB2Q96CS7 222 aa11.94□□□□□ -0.5
NME3-207ENST00000564628 TSTD3H0UI37 97 aa11.93□□□□□ -0.5
NME3-207ENST00000564628 LEPROTO15243 131 aa11.93□□□□□ -0.5
NME3-207ENST00000564628 NMUP48645 174 aa11.93□□□□□ -0.5
NME3-207ENST00000564628 A0A087WYN8 130 aa11.92□□□□□ -0.5
NME3-207ENST00000564628 SPINK8P0C7L1 97 aa11.92□□□□□ -0.5
NME3-207ENST00000564628 RNF151Q2KHN1 245 aa11.92□□□□□ -0.5
NME3-207ENST00000564628 PLAC8Q9NZF1 115 aa11.92□□□□□ -0.5
NME3-207ENST00000564628 IGKV2-24A0A0C4DH68 120 aa11.9□□□□□ -0.5
NME3-207ENST00000564628 NDUFA1O15239 70 aa11.9□□□□□ -0.5
NME3-207ENST00000564628 COX8AP10176 69 aa11.9□□□□□ -0.5
NME3-207ENST00000564628 LGALS3P17931 250 aaKnown RBP11.9□□□□□ -0.5
NME3-207ENST00000564628 LOC107984640A0A0U1RRK4 108 aa11.89□□□□□ -0.51
NME3-207ENST00000564628 SMIM1B2RUZ4 78 aa11.89□□□□□ -0.51
NME3-207ENST00000564628 J3QQQ9 107 aa11.89□□□□□ -0.51
NME3-207ENST00000564628 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
NME3-207ENST00000564628 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
NME3-207ENST00000564628 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
NME3-207ENST00000564628 IGKV2D-26A0A0A0MRZ7 120 aa11.88□□□□□ -0.51
NME3-207ENST00000564628 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
NME3-207ENST00000564628 DLEU1O43261 78 aa11.88□□□□□ -0.51
NME3-207ENST00000564628 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
NME3-207ENST00000564628 SLC25A34Q6PIV7 304 aa11.88□□□□□ -0.51
NME3-207ENST00000564628 PRO1933Q9H354 126 aa11.88□□□□□ -0.51
NME3-207ENST00000564628 UQCR10Q9UDW1 63 aa11.88□□□□□ -0.51
NME3-207ENST00000564628 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
NME3-207ENST00000564628 C6orf48Q9UBA6 75 aa11.87□□□□□ -0.51
NME3-207ENST00000564628 BOD1L2Q8IYS8 172 aa11.86□□□□□ -0.51
NME3-207ENST00000564628 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
NME3-207ENST00000564628 MIEN1Q9BRT3 115 aa11.86□□□□□ -0.51
NME3-207ENST00000564628 PRSS2P07478 247 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms