RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 MAP1LC3AQ9H492 121 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 Q9HAA7 133 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 TRAPPC1Q9Y5R8 145 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 PCLOQ9Y6V0 5065 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 IGIPA6NJ69 53 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 K7EMI3 77 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
SMG1-206ENST00000562668 MRPS36P82909 103 aaKnown RBP2.91□□□□□ -1.94
SMG1-206ENST00000562668 Q0VG73 95 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 MIAQ16674 131 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 CLPSL2Q6UWE3 100 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 Q6ZUT4 128 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 LINC00173Q6ZV60 143 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 ZNF664Q8N3J9 261 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 OR5A1Q8NGJ0 315 aa2.91□□□□□ -1.94
SMG1-206ENST00000562668 NXT2Q9NPJ8 142 aaKnown RBP2.91□□□□□ -1.94
SMG1-206ENST00000562668 IGLV10-54A0A075B6I4 117 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 IGKV2D-24A0A075B6R9 120 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 TRAV8-4A0A0B4J246 113 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 LINC00959A0A1B0GUT2 108 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 RPL37AP8A6NKH3 93 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 H0Y9J4 135 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 UBE2L6O14933 153 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 ATP6V1G1O75348 118 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 TRGC2P03986 189 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 RAB5AP20339 215 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 FCER1GP30273 86 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 FUSP35637 526 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMG1-206ENST00000562668 ORMDL2Q53FV1 153 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 RNASE13Q5GAN3 156 aaKnown RBP2.9□□□□□ -1.95
SMG1-206ENST00000562668 LINC00242Q5T6M2 205 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 RNASEKQ6P5S7 137 aaKnown RBP2.9□□□□□ -1.95
SMG1-206ENST00000562668 C2orf66Q6UXQ4 117 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 FAM19A3Q7Z5A8 133 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 Q8N814 137 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 C15orf56Q8N910 161 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 BAALCQ8WXS3 180 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 TOMM6Q96B49 74 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 AMELXQ99217 191 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 SPANXA1Q9NS26 97 aa2.9□□□□□ -1.95
SMG1-206ENST00000562668 LECT2O14960 151 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 NUPR1O60356 82 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 CRPP02741 224 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 LINC00614P0C842 121 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 PDZD11Q5EBL8 140 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 AMMECR1LQ6DCA0 310 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 SPATA12Q7Z6I5 190 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 CHCHD10Q8WYQ3 142 aaPredicted RBP2.89□□□□□ -1.95
SMG1-206ENST00000562668 RMI2Q96E14 147 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 VPS13BQ7Z7G8 4022 aa2.89□□□□□ -1.95
SMG1-206ENST00000562668 PKHD1L1Q86WI1 4243 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 IGHV3OR16-9A0A0B4J2B5 98 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 CCL25O15444 150 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 S100A1P23297 94 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 UBE2D1P51668 147 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 COX6A2Q02221 97 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 CD164L2Q6UWJ8 174 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 PET117Q6UWS5 81 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 ERASQ7Z444 233 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 TMEM101Q96IK0 257 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 TIMM17AQ99595 171 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 CYSLTR1Q9Y271 337 aa2.88□□□□□ -1.95
SMG1-206ENST00000562668 GVQW2A0A096LPI5 108 aaPredicted RBP2.87□□□□□ -1.95
SMG1-206ENST00000562668 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 C1orf196B1AJZ1 125 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 PSCAO43653 123 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BKO60814 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BJP06899 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BOP23527 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BBP33778 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 XCL1P47992 114 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BDP58876 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BCP62807 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 SMAGPQ0VAQ4 97 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 PMCHL1Q16048 86 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST2H2BEQ16778 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BHQ93079 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 CHCHD1Q96BP2 118 aaKnown RBP2.87□□□□□ -1.95
SMG1-206ENST00000562668 TMEM141Q96I45 108 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BNQ99877 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 HIST1H2BMQ99879 126 aa2.87□□□□□ -1.95
SMG1-206ENST00000562668 IGLV4-69A0A075B6H9 119 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
SMG1-206ENST00000562668 TRAV13-1A0A0B4J241 112 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 SERF1AO75920 110 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 HBDP02042 147 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 CNBPP62633 177 aaKnown RBP2.86□□□□□ -1.95
SMG1-206ENST00000562668 KIAA0087Q14695 138 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 SS18Q15532 418 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 LINC01620Q4KN68 170 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 COA6Q5JTJ3 125 aaKnown RBP2.86□□□□□ -1.95
SMG1-206ENST00000562668 Q6ZSA8 131 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 FA2HQ7L5A8 372 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 C9orf163Q8N9P6 203 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 CST9LQ9H4G1 147 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 FAT3Q8TDW7 4589 aa2.86□□□□□ -1.95
SMG1-206ENST00000562668 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
SMG1-206ENST00000562668 IGHV3-64A0A075B6Q5 118 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms