RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 hDV102S1A0JD36 115 aa6.87□□□□□ -1.31
TPM1-227ENST00000560970 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
TPM1-227ENST00000560970 SLPIP03973 132 aa6.87□□□□□ -1.31
TPM1-227ENST00000560970 NPSP0C0P6 89 aa6.87□□□□□ -1.31
TPM1-227ENST00000560970 PLNP26678 52 aa6.87□□□□□ -1.31
TPM1-227ENST00000560970 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
TPM1-227ENST00000560970 MIEN1Q9BRT3 115 aa6.87□□□□□ -1.31
TPM1-227ENST00000560970 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.87□□□□□ -1.31
TPM1-227ENST00000560970 IGLV4-3A0A075B6K6 122 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 DPM2O94777 84 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 IGLC3P0DOY3 106 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
TPM1-227ENST00000560970 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 SS18Q15532 418 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 PMCHL2Q9BQD1 86 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 UQCR10Q9UDW1 63 aa6.86□□□□□ -1.31
TPM1-227ENST00000560970 F8VRH5 84 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 IGKCP01834 107 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
TPM1-227ENST00000560970 MAJINQ3KP22 176 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 PAPPA-AS1Q5QFB9 102 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 ZC2HC1BQ5TFG8 222 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 PYGO1Q9Y3Y4 419 aa6.85□□□□□ -1.31
TPM1-227ENST00000560970 GVQW2A0A096LPI5 108 aaPredicted RBP6.84□□□□□ -1.31
TPM1-227ENST00000560970 PANO1I0J062 215 aa6.84□□□□□ -1.31
TPM1-227ENST00000560970 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
TPM1-227ENST00000560970 CIRBPQ14011 172 aaKnown RBP6.84□□□□□ -1.31
TPM1-227ENST00000560970 PMVKQ15126 192 aa6.84□□□□□ -1.31
TPM1-227ENST00000560970 LINC00526Q96FQ7 95 aa6.84□□□□□ -1.31
TPM1-227ENST00000560970 MRPL35Q9NZE8 188 aaKnown RBP6.84□□□□□ -1.31
TPM1-227ENST00000560970 CHTOPQ9Y3Y2 248 aaKnown RBP6.84□□□□□ -1.31
TPM1-227ENST00000560970 Q6ZRU5 148 aa6.83□□□□□ -1.32
TPM1-227ENST00000560970 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
TPM1-227ENST00000560970 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
TPM1-227ENST00000560970 C5orf38Q86SI9 138 aa6.82□□□□□ -1.32
TPM1-227ENST00000560970 CST9LQ9H4G1 147 aa6.82□□□□□ -1.32
TPM1-227ENST00000560970 IGHV3-64A0A075B6Q5 118 aa6.81□□□□□ -1.32
TPM1-227ENST00000560970 COX7A2LO14548 114 aa6.81□□□□□ -1.32
TPM1-227ENST00000560970 COX8AP10176 69 aa6.81□□□□□ -1.32
TPM1-227ENST00000560970 SLC25A34Q6PIV7 304 aa6.81□□□□□ -1.32
TPM1-227ENST00000560970 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
TPM1-227ENST00000560970 AMELXQ99217 191 aa6.81□□□□□ -1.32
TPM1-227ENST00000560970 TNXBP22105 4242 aa6.81□□□□□ -1.32
TPM1-227ENST00000560970 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.8□□□□□ -1.32
TPM1-227ENST00000560970 IGHV3OR16-9A0A0B4J2B5 98 aa6.8□□□□□ -1.32
TPM1-227ENST00000560970 DLEU1O43261 78 aa6.8□□□□□ -1.32
TPM1-227ENST00000560970 UBE2D1P51668 147 aa6.8□□□□□ -1.32
TPM1-227ENST00000560970 COX6A2Q02221 97 aa6.8□□□□□ -1.32
TPM1-227ENST00000560970 SPACA4Q8TDM5 124 aa6.8□□□□□ -1.32
TPM1-227ENST00000560970 C14orf144Q96I85 54 aa6.8□□□□□ -1.32
TPM1-227ENST00000560970 IGLV4-69A0A075B6H9 119 aa6.79□□□□□ -1.32
TPM1-227ENST00000560970 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
TPM1-227ENST00000560970 MALP21145 153 aa6.79□□□□□ -1.32
TPM1-227ENST00000560970 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
TPM1-227ENST00000560970 STPG4Q8N801 248 aa6.79□□□□□ -1.32
TPM1-227ENST00000560970 VCX2Q9H322 139 aa6.79□□□□□ -1.32
TPM1-227ENST00000560970 HERVK_113P61574 105 aa6.78□□□□□ -1.32
TPM1-227ENST00000560970 LRP2P98164 4655 aa6.78□□□□□ -1.32
TPM1-227ENST00000560970 LBHQ53QV2 105 aaPredicted RBP6.78□□□□□ -1.32
TPM1-227ENST00000560970 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
TPM1-227ENST00000560970 C2orf88Q9BSF0 95 aa6.78□□□□□ -1.32
TPM1-227ENST00000560970 A0A087WYN8 130 aa6.77□□□□□ -1.33
TPM1-227ENST00000560970 C11orf86A6NJI1 115 aa6.77□□□□□ -1.33
TPM1-227ENST00000560970 SPAG11BQ08648 103 aa6.77□□□□□ -1.33
TPM1-227ENST00000560970 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
TPM1-227ENST00000560970 C7orf33Q8WU49 177 aa6.77□□□□□ -1.33
TPM1-227ENST00000560970 ORAOV1Q8WV07 137 aa6.77□□□□□ -1.33
TPM1-227ENST00000560970 A0A087WZ39 114 aa6.76□□□□□ -1.33
TPM1-227ENST00000560970 E9PLD3 99 aa6.76□□□□□ -1.33
TPM1-227ENST00000560970 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
TPM1-227ENST00000560970 M0R143 59 aa6.76□□□□□ -1.33
TPM1-227ENST00000560970 NMUP48645 174 aa6.76□□□□□ -1.33
TPM1-227ENST00000560970 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
TPM1-227ENST00000560970 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
TPM1-227ENST00000560970 A0A096LNI7 61 aa6.75□□□□□ -1.33
TPM1-227ENST00000560970 APOMO95445 188 aa6.75□□□□□ -1.33
TPM1-227ENST00000560970 CTAG1AP78358 180 aa6.75□□□□□ -1.33
TPM1-227ENST00000560970 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
TPM1-227ENST00000560970 SYCNQ0VAF6 134 aa6.75□□□□□ -1.33
TPM1-227ENST00000560970 IGKV2D-26A0A0A0MRZ7 120 aa6.74□□□□□ -1.33
TPM1-227ENST00000560970 IGKV2-24A0A0C4DH68 120 aa6.74□□□□□ -1.33
TPM1-227ENST00000560970 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
TPM1-227ENST00000560970 TINCRA0A1B0GVN0 87 aa6.74□□□□□ -1.33
TPM1-227ENST00000560970 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
TPM1-227ENST00000560970 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
TPM1-227ENST00000560970 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
TPM1-227ENST00000560970 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
TPM1-227ENST00000560970 SEC11AP67812 179 aa6.73□□□□□ -1.33
TPM1-227ENST00000560970 TMEM170BQ5T4T1 132 aa6.73□□□□□ -1.33
TPM1-227ENST00000560970 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
TPM1-227ENST00000560970 C2orf91Q6ZV80 131 aa6.73□□□□□ -1.33
TPM1-227ENST00000560970 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
TPM1-227ENST00000560970 DPH3Q96FX2 82 aa6.73□□□□□ -1.33
TPM1-227ENST00000560970 SNHG12Q9BXW3 62 aa6.73□□□□□ -1.33
TPM1-227ENST00000560970 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms