RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
LYSMD2-204ENST00000560491 PRSS2P07478 247 aa9.9□□□□□ -0.82
LYSMD2-204ENST00000560491 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.82
LYSMD2-204ENST00000560491 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
LYSMD2-204ENST00000560491 F8WDY8 70 aa9.89□□□□□ -0.83
LYSMD2-204ENST00000560491 Q8IZM0 81 aa9.89□□□□□ -0.83
LYSMD2-204ENST00000560491 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
LYSMD2-204ENST00000560491 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
LYSMD2-204ENST00000560491 H3BRM9 83 aa9.88□□□□□ -0.83
LYSMD2-204ENST00000560491 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
LYSMD2-204ENST00000560491 SPACA4Q8TDM5 124 aa9.88□□□□□ -0.83
LYSMD2-204ENST00000560491 LOC107984640A0A0U1RRK4 108 aa9.87□□□□□ -0.83
LYSMD2-204ENST00000560491 F8VRH5 84 aa9.87□□□□□ -0.83
LYSMD2-204ENST00000560491 RNF151Q2KHN1 245 aa9.87□□□□□ -0.83
LYSMD2-204ENST00000560491 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
LYSMD2-204ENST00000560491 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
LYSMD2-204ENST00000560491 Q8N1X5 172 aa9.87□□□□□ -0.83
LYSMD2-204ENST00000560491 SMCPP49901 116 aaPredicted RBP9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 CKS1BP61024 79 aa9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 RPL18AQ02543 176 aaKnown RBP9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 ODF1Q14990 250 aa9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 MAJINQ3KP22 176 aa9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 COA6Q5JTJ3 125 aaKnown RBP9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 COX7B2Q8TF08 81 aa9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
LYSMD2-204ENST00000560491 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
LYSMD2-204ENST00000560491 DPH3Q96FX2 82 aa9.85□□□□□ -0.83
LYSMD2-204ENST00000560491 KRTAP4-5Q9BYR2 181 aa9.85□□□□□ -0.83
LYSMD2-204ENST00000560491 A0A087WYN8 130 aa9.84□□□□□ -0.83
LYSMD2-204ENST00000560491 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
LYSMD2-204ENST00000560491 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.83
LYSMD2-204ENST00000560491 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
LYSMD2-204ENST00000560491 Q5VSD8 79 aa9.83□□□□□ -0.84
LYSMD2-204ENST00000560491 PMCHL2Q9BQD1 86 aa9.83□□□□□ -0.84
LYSMD2-204ENST00000560491 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
LYSMD2-204ENST00000560491 CXCL5P42830 114 aa9.82□□□□□ -0.84
LYSMD2-204ENST00000560491 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
LYSMD2-204ENST00000560491 STPG4Q8N801 248 aa9.82□□□□□ -0.84
LYSMD2-204ENST00000560491 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
LYSMD2-204ENST00000560491 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
LYSMD2-204ENST00000560491 TLX1NBP0CAT3 122 aa9.81□□□□□ -0.84
LYSMD2-204ENST00000560491 Q6ZRP5 223 aa9.81□□□□□ -0.84
LYSMD2-204ENST00000560491 PLAC8Q9NZF1 115 aa9.81□□□□□ -0.84
LYSMD2-204ENST00000560491 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
LYSMD2-204ENST00000560491 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
LYSMD2-204ENST00000560491 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
LYSMD2-204ENST00000560491 GAGE2DQ9UEU5 116 aa9.8□□□□□ -0.84
LYSMD2-204ENST00000560491 SYS1-DBNDD2H3BUS1 97 aa9.79□□□□□ -0.84
LYSMD2-204ENST00000560491 NDUFC2-KCTD14E9PQ53 114 aa9.78□□□□□ -0.84
LYSMD2-204ENST00000560491 DPM2O94777 84 aa9.78□□□□□ -0.84
LYSMD2-204ENST00000560491 PLNP26678 52 aa9.78□□□□□ -0.84
LYSMD2-204ENST00000560491 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
LYSMD2-204ENST00000560491 A0A1W2PNN7 141 aa9.77□□□□□ -0.85
LYSMD2-204ENST00000560491 FAM229AH3BQW9 127 aa9.77□□□□□ -0.85
LYSMD2-204ENST00000560491 IGKCP01834 107 aa9.77□□□□□ -0.85
LYSMD2-204ENST00000560491 C3orf79P0CE67 100 aa9.76□□□□□ -0.85
LYSMD2-204ENST00000560491 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
LYSMD2-204ENST00000560491 KRTDAPP60985 99 aa9.75□□□□□ -0.85
LYSMD2-204ENST00000560491 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
LYSMD2-204ENST00000560491 PET117Q6UWS5 81 aa9.74□□□□□ -0.85
LYSMD2-204ENST00000560491 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
LYSMD2-204ENST00000560491 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
LYSMD2-204ENST00000560491 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
LYSMD2-204ENST00000560491 LINC01545Q5VT33 79 aa9.73□□□□□ -0.85
LYSMD2-204ENST00000560491 XAGE1AQ9HD64 81 aa9.73□□□□□ -0.85
LYSMD2-204ENST00000560491 S100A6P06703 90 aa9.72□□□□□ -0.85
LYSMD2-204ENST00000560491 PFN2P35080 140 aa9.72□□□□□ -0.85
LYSMD2-204ENST00000560491 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
LYSMD2-204ENST00000560491 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
LYSMD2-204ENST00000560491 PLA2G1BP04054 148 aaKnown RBP9.71□□□□□ -0.86
LYSMD2-204ENST00000560491 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
LYSMD2-204ENST00000560491 RPL37AP61513 92 aaKnown RBP9.71□□□□□ -0.86
LYSMD2-204ENST00000560491 KRTAP7-1Q8IUC3 87 aa9.71□□□□□ -0.86
LYSMD2-204ENST00000560491 LEPROTO15243 131 aa9.7□□□□□ -0.86
LYSMD2-204ENST00000560491 HERVK_113P61574 105 aa9.7□□□□□ -0.86
LYSMD2-204ENST00000560491 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
LYSMD2-204ENST00000560491 C7orf33Q8WU49 177 aa9.7□□□□□ -0.86
LYSMD2-204ENST00000560491 HIST1H2BLQ99880 126 aa9.7□□□□□ -0.86
LYSMD2-204ENST00000560491 S100A2P29034 98 aa9.69□□□□□ -0.86
LYSMD2-204ENST00000560491 SNRPEP62304 92 aaKnown RBP9.69□□□□□ -0.86
LYSMD2-204ENST00000560491 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
LYSMD2-204ENST00000560491 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
LYSMD2-204ENST00000560491 SFTA2Q6UW10 78 aa9.69□□□□□ -0.86
LYSMD2-204ENST00000560491 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
LYSMD2-204ENST00000560491 SRRM2Q9UQ35 2752 aaKnown RBP9.68□□□□□ -0.86
LYSMD2-204ENST00000560491 J3QL48 77 aa9.68□□□□□ -0.86
LYSMD2-204ENST00000560491 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
LYSMD2-204ENST00000560491 NDUFA12Q9UI09 145 aa9.68□□□□□ -0.86
LYSMD2-204ENST00000560491 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
LYSMD2-204ENST00000560491 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
LYSMD2-204ENST00000560491 J3QQQ9 107 aa9.67□□□□□ -0.86
LYSMD2-204ENST00000560491 C20orf202A1L168 122 aa9.66□□□□□ -0.86
LYSMD2-204ENST00000560491 M0QXV9 152 aa9.66□□□□□ -0.86
LYSMD2-204ENST00000560491 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
LYSMD2-204ENST00000560491 COX17Q14061 63 aa9.66□□□□□ -0.86
LYSMD2-204ENST00000560491 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
LYSMD2-204ENST00000560491 E9PLD3 99 aa9.65□□□□□ -0.86
LYSMD2-204ENST00000560491 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.86
LYSMD2-204ENST00000560491 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms