RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 UMAD1C9J7I0 102 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 S100A6P06703 90 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 KRTAP10-10P60014 251 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 RAB4BP61018 213 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 HERVK_113P61574 105 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 SPANXN1Q5VSR9 72 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 BAGE2Q86Y30 109 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 CEND1Q8N111 149 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 MBD3L1Q8WWY6 194 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 AP1S3Q96PC3 154 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 DERL1Q9BUN8 251 aa3.43□□□□□ -1.86
HERC1-208ENST00000560462 HMSDA8MTL9 139 aa3.42□□□□□ -1.86
HERC1-208ENST00000560462 OR5AL1P0C617 328 aa3.42□□□□□ -1.86
HERC1-208ENST00000560462 RPL35P42766 123 aaKnown RBP3.42□□□□□ -1.86
HERC1-208ENST00000560462 UBE2BP63146 152 aa3.42□□□□□ -1.86
HERC1-208ENST00000560462 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
HERC1-208ENST00000560462 SLC7A5P1Q8MH63 180 aa3.42□□□□□ -1.86
HERC1-208ENST00000560462 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.42□□□□□ -1.86
HERC1-208ENST00000560462 C20orf203Q8NBC4 194 aa3.42□□□□□ -1.86
HERC1-208ENST00000560462 MANBALQ9NQG1 85 aa3.42□□□□□ -1.86
HERC1-208ENST00000560462 GNG13Q9P2W3 67 aa3.42□□□□□ -1.86
HERC1-208ENST00000560462 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
HERC1-208ENST00000560462 K7EN84 100 aa3.41□□□□□ -1.86
HERC1-208ENST00000560462 MGPP08493 103 aa3.41□□□□□ -1.86
HERC1-208ENST00000560462 SMIM17P0DL12 118 aa3.41□□□□□ -1.86
HERC1-208ENST00000560462 CENPWQ5EE01 88 aa3.41□□□□□ -1.86
HERC1-208ENST00000560462 NTM-AS1Q6ZSK4 140 aa3.41□□□□□ -1.86
HERC1-208ENST00000560462 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 IGLC6P0CF74 106 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 BCL2P10415 239 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 GNG4P50150 75 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 CCL20P78556 96 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 MEF2BQ02080 365 aaPredicted RBP3.4□□□□□ -1.87
HERC1-208ENST00000560462 SYCNQ0VAF6 134 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 TMEM97Q5BJF2 176 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 Q6Q795 121 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 OR2D3Q8NGH3 330 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 LINC00526Q96FQ7 95 aa3.4□□□□□ -1.87
HERC1-208ENST00000560462 TRBV20OR9-2A0A075B6H5 130 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 IGHV1-24A0A0C4DH33 117 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 C19orf71A6NCJ1 209 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 IFNA1P01562 189 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 SULT1A2P50226 295 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 RPS20P60866 119 aaKnown RBP3.39□□□□□ -1.87
HERC1-208ENST00000560462 IQCJQ1A5X6 159 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 C5orf47Q569G3 176 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 SPAG11AQ6PDA7 123 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 SMIM12Q96EX1 92 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 NDUFA12Q9UI09 145 aa3.39□□□□□ -1.87
HERC1-208ENST00000560462 M0QY20 66 aa3.38□□□□□ -1.87
HERC1-208ENST00000560462 PDE6DO43924 150 aa3.38□□□□□ -1.87
HERC1-208ENST00000560462 TRGC1P0CF51 173 aa3.38□□□□□ -1.87
HERC1-208ENST00000560462 CTRLP40313 264 aa3.38□□□□□ -1.87
HERC1-208ENST00000560462 NKX2-5P52952 324 aaPredicted RBP3.38□□□□□ -1.87
HERC1-208ENST00000560462 RASL11AQ6T310 242 aa3.38□□□□□ -1.87
HERC1-208ENST00000560462 MED9Q9NWA0 146 aa3.38□□□□□ -1.87
HERC1-208ENST00000560462 IGLV4-60A0A075B6I1 120 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 F2Z2F3 143 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 APOMO95445 188 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 SPRR2EP22531 72 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 SPRR2BP35325 72 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 SPRR2AP35326 72 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 LYZL1Q6UWQ5 148 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 FAM19A5Q7Z5A7 132 aaPredicted RBP3.37□□□□□ -1.87
HERC1-208ENST00000560462 FAM19A1Q7Z5A9 133 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 TCTE3Q8IZS6 198 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 TMEM243Q9BU79 118 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 BIN3Q9NQY0 253 aa3.37□□□□□ -1.87
HERC1-208ENST00000560462 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
HERC1-208ENST00000560462 UBE2L6O14933 153 aa3.36□□□□□ -1.87
HERC1-208ENST00000560462 NTF3P20783 257 aa3.36□□□□□ -1.87
HERC1-208ENST00000560462 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
HERC1-208ENST00000560462 NMUP48645 174 aa3.36□□□□□ -1.87
HERC1-208ENST00000560462 MRPL52Q86TS9 123 aaKnown RBP3.36□□□□□ -1.87
HERC1-208ENST00000560462 SLC51BQ86UW2 128 aa3.36□□□□□ -1.87
HERC1-208ENST00000560462 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
HERC1-208ENST00000560462 RNASE7Q9H1E1 156 aaKnown RBP3.36□□□□□ -1.87
HERC1-208ENST00000560462 NIT2Q9NQR4 276 aa3.36□□□□□ -1.87
HERC1-208ENST00000560462 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.35□□□□□ -1.87
HERC1-208ENST00000560462 C9orf62Q8N4C0 152 aa3.35□□□□□ -1.87
HERC1-208ENST00000560462 GATD1Q8NB37 220 aa3.35□□□□□ -1.87
HERC1-208ENST00000560462 FAM104AQ969W3 186 aa3.35□□□□□ -1.87
HERC1-208ENST00000560462 RPL39LQ96EH5 51 aaKnown RBP3.35□□□□□ -1.87
HERC1-208ENST00000560462 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.87
HERC1-208ENST00000560462 IGHV1-58A0A0C4DH39 117 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 IGKV3OR2-268A0A0C4DH90 116 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 FAM240AA0A1B0GVK7 77 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
HERC1-208ENST00000560462 M0QXV9 152 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 APCSP02743 223 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 CEBPGP53567 150 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 ALKAL2Q6UX46 152 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 SMIM15Q7Z3B0 74 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 AKAP14Q86UN6 197 aa3.34□□□□□ -1.87
HERC1-208ENST00000560462 IGLV4-69A0A075B6H9 119 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 SDHAF1A6NFY7 115 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 TMEM250H0YL14 139 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 NUPR1O60356 82 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms