RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 LOC107984640A0A0U1RRK4 108 aa10.68□□□□□ -0.7
RPL28-209ENST00000560055 Q5VSD8 79 aa10.68□□□□□ -0.7
RPL28-209ENST00000560055 A0A087WYN8 130 aa10.67□□□□□ -0.7
RPL28-209ENST00000560055 IGKV2-24A0A0C4DH68 120 aa10.67□□□□□ -0.7
RPL28-209ENST00000560055 EPM2AB3EWF7 344 aa10.67□□□□□ -0.7
RPL28-209ENST00000560055 ZNF22P17026 224 aaPredicted RBP10.67□□□□□ -0.7
RPL28-209ENST00000560055 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
RPL28-209ENST00000560055 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
RPL28-209ENST00000560055 TOMM7Q9P0U1 55 aa10.67□□□□□ -0.7
RPL28-209ENST00000560055 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
RPL28-209ENST00000560055 TRBV30A0A0K0K1B3 111 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 H3BRM9 83 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 LEPROTL1O95214 131 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 PRSS2P07478 247 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 TLX1NBP0CAT3 122 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 LINC00528Q8N1L1 170 aa10.66□□□□□ -0.7
RPL28-209ENST00000560055 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
RPL28-209ENST00000560055 SPINK8P0C7L1 97 aa10.65□□□□□ -0.7
RPL28-209ENST00000560055 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
RPL28-209ENST00000560055 C6orf226Q5I0X4 101 aa10.65□□□□□ -0.7
RPL28-209ENST00000560055 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.71
RPL28-209ENST00000560055 IGLV5-39A0A0G2JS06 123 aa10.64□□□□□ -0.71
RPL28-209ENST00000560055 FAM229AH3BQW9 127 aa10.64□□□□□ -0.71
RPL28-209ENST00000560055 HERC1Q15751 4861 aa10.64□□□□□ -0.71
RPL28-209ENST00000560055 PKHD1L1Q86WI1 4243 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 F8VRH5 84 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 CXCL5P42830 114 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 CKS1BP61024 79 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 GAGE2BQ13066 116 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 COX7B2Q8TF08 81 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 DPH3Q96FX2 82 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
RPL28-209ENST00000560055 RPL18AQ02543 176 aaKnown RBP10.62□□□□□ -0.71
RPL28-209ENST00000560055 ODF1Q14990 250 aa10.62□□□□□ -0.71
RPL28-209ENST00000560055 COA6Q5JTJ3 125 aaKnown RBP10.62□□□□□ -0.71
RPL28-209ENST00000560055 Q6ZRP5 223 aa10.62□□□□□ -0.71
RPL28-209ENST00000560055 STPG4Q8N801 248 aa10.62□□□□□ -0.71
RPL28-209ENST00000560055 C9orf116Q5BN46 136 aaPredicted RBP10.61□□□□□ -0.71
RPL28-209ENST00000560055 NDUFC2-KCTD14E9PQ53 114 aa10.6□□□□□ -0.71
RPL28-209ENST00000560055 INAFM2P0DMQ5 153 aa10.6□□□□□ -0.71
RPL28-209ENST00000560055 FABP4P15090 132 aa10.6□□□□□ -0.71
RPL28-209ENST00000560055 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
RPL28-209ENST00000560055 MYCBP2O75592 4640 aa10.6□□□□□ -0.71
RPL28-209ENST00000560055 KRTAP10-4P60372 401 aaPredicted RBP10.59□□□□□ -0.71
RPL28-209ENST00000560055 FLG2Q5D862 2391 aaPredicted RBP10.58□□□□□ -0.72
RPL28-209ENST00000560055 A0A1W2PNN7 141 aa10.57□□□□□ -0.72
RPL28-209ENST00000560055 TMEM223A0PJW6 202 aa10.57□□□□□ -0.72
RPL28-209ENST00000560055 H0Y8G0 127 aa10.57□□□□□ -0.72
RPL28-209ENST00000560055 PLA2G1BP04054 148 aaKnown RBP10.57□□□□□ -0.72
RPL28-209ENST00000560055 DMBT1Q9UGM3 2413 aaPredicted RBP10.56□□□□□ -0.72
RPL28-209ENST00000560055 GAGE2EQ4V326 116 aa10.55□□□□□ -0.72
RPL28-209ENST00000560055 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
RPL28-209ENST00000560055 GAGE2DQ9UEU5 116 aa10.55□□□□□ -0.72
RPL28-209ENST00000560055 PLNP26678 52 aa10.54□□□□□ -0.72
RPL28-209ENST00000560055 RPL37AP61513 92 aaKnown RBP10.53□□□□□ -0.72
RPL28-209ENST00000560055 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
RPL28-209ENST00000560055 FAM168BA1KXE4 195 aa10.52□□□□□ -0.73
RPL28-209ENST00000560055 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
RPL28-209ENST00000560055 ZNF625Q96I27 306 aaPredicted RBP10.52□□□□□ -0.73
RPL28-209ENST00000560055 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
RPL28-209ENST00000560055 SYS1-DBNDD2H3BUS1 97 aa10.51□□□□□ -0.73
RPL28-209ENST00000560055 DPM2O94777 84 aa10.51□□□□□ -0.73
RPL28-209ENST00000560055 SFTA2Q6UW10 78 aa10.51□□□□□ -0.73
RPL28-209ENST00000560055 C7orf33Q8WU49 177 aa10.51□□□□□ -0.73
RPL28-209ENST00000560055 IGKCP01834 107 aa10.49□□□□□ -0.73
RPL28-209ENST00000560055 FAT3Q8TDW7 4589 aa10.48□□□□□ -0.73
RPL28-209ENST00000560055 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
RPL28-209ENST00000560055 XAGE1AQ9HD64 81 aa10.48□□□□□ -0.73
RPL28-209ENST00000560055 PET117Q6UWS5 81 aa10.47□□□□□ -0.73
RPL28-209ENST00000560055 PHF5AQ7RTV0 110 aaKnown RBP10.47□□□□□ -0.73
RPL28-209ENST00000560055 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
RPL28-209ENST00000560055 LRP1Q07954 4544 aaKnown RBP10.47□□□□□ -0.73
RPL28-209ENST00000560055 C3orf79P0CE67 100 aa10.46□□□□□ -0.73
RPL28-209ENST00000560055 HNRNPA3P51991 378 aaKnown RBP10.46□□□□□ -0.73
RPL28-209ENST00000560055 PRR3P79522 188 aaKnown RBP10.46□□□□□ -0.73
RPL28-209ENST00000560055 COX17Q14061 63 aa10.46□□□□□ -0.73
RPL28-209ENST00000560055 ERG28Q9UKR5 140 aa10.46□□□□□ -0.73
RPL28-209ENST00000560055 TSPEAR-AS2P59090 65 aa10.45□□□□□ -0.74
RPL28-209ENST00000560055 SERTAD4-AS1Q5TG53 156 aa10.45□□□□□ -0.74
RPL28-209ENST00000560055 LEPROTO15243 131 aa10.44□□□□□ -0.74
RPL28-209ENST00000560055 PFN2P35080 140 aa10.44□□□□□ -0.74
RPL28-209ENST00000560055 M0QXV9 152 aa10.43□□□□□ -0.74
RPL28-209ENST00000560055 HERVK_113P61574 105 aa10.43□□□□□ -0.74
RPL28-209ENST00000560055 HIST3H2BBQ8N257 126 aa10.43□□□□□ -0.74
RPL28-209ENST00000560055 PLEKHB2Q96CS7 222 aa10.43□□□□□ -0.74
RPL28-209ENST00000560055 KRTDAPP60985 99 aa10.42□□□□□ -0.74
RPL28-209ENST00000560055 NDUFA12Q9UI09 145 aa10.42□□□□□ -0.74
RPL28-209ENST00000560055 PLA2G2DQ9UNK4 145 aa10.42□□□□□ -0.74
RPL28-209ENST00000560055 J3QQQ9 107 aa10.41□□□□□ -0.74
RPL28-209ENST00000560055 HERV-K104P63124 156 aa10.41□□□□□ -0.74
RPL28-209ENST00000560055 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
RPL28-209ENST00000560055 SND1-IT1Q9HBX3 110 aa10.41□□□□□ -0.74
RPL28-209ENST00000560055 MYMXA0A1B0GTQ4 84 aa10.4□□□□□ -0.74
RPL28-209ENST00000560055 E9PLD3 99 aa10.4□□□□□ -0.74
RPL28-209ENST00000560055 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.74
RPL28-209ENST00000560055 TP73-AS1Q9UF72 201 aa10.4□□□□□ -0.74
RPL28-209ENST00000560055 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
RPL28-209ENST00000560055 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms