RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 IL5P05113 134 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 HMGA1P17096 107 aaKnown RBP3.36□□□□□ -1.87
CASC4-208ENST00000559151 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
CASC4-208ENST00000559151 KRTAP10-4P60372 401 aaPredicted RBP3.36□□□□□ -1.87
CASC4-208ENST00000559151 ADIRFQ15847 76 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 SBSPONQ8IVN8 264 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 TSKUQ8WUA8 353 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 SPTSSAQ969W0 71 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 CHCHD1Q96BP2 118 aaKnown RBP3.36□□□□□ -1.87
CASC4-208ENST00000559151 DPH3P1Q9H4G8 78 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 ACANP16112 2415 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 CUBNO60494 3623 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 TGP01266 2768 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 ZANQ9Y493 2812 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 EML6Q6ZMW3 1958 aa3.36□□□□□ -1.87
CASC4-208ENST00000559151 MXRA5Q9NR99 2828 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 PLXNA2O75051 1894 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 C12orf73Q69YU5 71 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 ATP11AUNQ6ZP68 121 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 CCL4L1Q8NHW4 92 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 VSTM2AQ8TAG5 236 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 ZNF431Q8TF32 576 aaPredicted RBP3.35□□□□□ -1.87
CASC4-208ENST00000559151 NOTCH1P46531 2555 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 PKDREJQ9NTG1 2253 aa3.35□□□□□ -1.87
CASC4-208ENST00000559151 FLNAP21333 2647 aaKnown RBP3.34□□□□□ -1.87
CASC4-208ENST00000559151 UNC13CQ8NB66 2214 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 UBE2L5PA0A1B0GUS4 154 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 A6NN06 94 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 J3QLW9 94 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 LYRM1O43325 122 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 UBE2L3P68036 154 aaKnown RBP3.34□□□□□ -1.87
CASC4-208ENST00000559151 SMR3AQ99954 134 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 NABP2Q9BQ15 211 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 C20orf78Q9BR46 151 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 LINC00467Q9BRT7 94 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 ST20Q9HBF5 79 aa3.34□□□□□ -1.87
CASC4-208ENST00000559151 TLN2Q9Y4G6 2542 aa3.34□□□□□ -1.88
CASC4-208ENST00000559151 EXPH5Q8NEV8 1989 aa3.34□□□□□ -1.88
CASC4-208ENST00000559151 C10orf142B7Z368 130 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 CFDP00746 253 aaPredicted RBP3.33□□□□□ -1.88
CASC4-208ENST00000559151 CBLN1P23435 193 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 POLR2JP52435 117 aaKnown RBP3.33□□□□□ -1.88
CASC4-208ENST00000559151 HMGN3Q15651 99 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 ASB16-AS1Q495Z4 193 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 ARPINQ7Z6K5 226 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 C5orf38Q86SI9 138 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 RABAC1Q9UI14 185 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 SPCS1Q9Y6A9 102 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 LY96Q9Y6Y9 160 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 ANK2Q01484 3957 aa3.33□□□□□ -1.88
CASC4-208ENST00000559151 TNRC6AQ8NDV7 1962 aaKnown RBP3.32□□□□□ -1.88
CASC4-208ENST00000559151 CNTRLQ7Z7A1 2325 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 LOC110117498A0A087WWA1 95 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 IGHV1-24A0A0C4DH33 117 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 H3BRM9 83 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 M0R233 179 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 SEC11AP67812 179 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 INSL4Q14641 139 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 Q8N8P6 123 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 CST11Q9H112 138 aa3.32□□□□□ -1.88
CASC4-208ENST00000559151 TRBV7-7A0A0K0K1E9 115 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 ATOX1O00244 68 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 IGKCP01834 107 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 IGLC2P0DOY2 106 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 IGLC3P0DOY3 106 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 CXCL8P10145 99 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 PIPP12273 146 aaPredicted RBP3.31□□□□□ -1.88
CASC4-208ENST00000559151 FAUP35544 74 aaKnown RBP3.31□□□□□ -1.88
CASC4-208ENST00000559151 SLC25A26Q70HW3 274 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 OR10AG1Q8NH19 301 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 FAM213BQ8TBF2 198 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 TMEM254Q8TBM7 123 aa3.31□□□□□ -1.88
CASC4-208ENST00000559151 HEPN1Q6WQI6 88 aa3.3□□□□□ -1.88
CASC4-208ENST00000559151 PPDPFLQ8WWR9 84 aa3.3□□□□□ -1.88
CASC4-208ENST00000559151 CACFD1Q9UGQ2 172 aa3.3□□□□□ -1.88
CASC4-208ENST00000559151 HRNRQ86YZ3 2850 aaPredicted RBP3.3□□□□□ -1.88
CASC4-208ENST00000559151 CHD3Q12873 2000 aaKnown RBP3.29□□□□□ -1.88
CASC4-208ENST00000559151 AKAP6Q13023 2319 aa3.29□□□□□ -1.88
CASC4-208ENST00000559151 TRBV6-7A0A0A0MS04 114 aa3.29□□□□□ -1.88
CASC4-208ENST00000559151 hADV29S1A0JD25 119 aa3.29□□□□□ -1.88
CASC4-208ENST00000559151 PIRTP0C851 137 aa3.29□□□□□ -1.88
CASC4-208ENST00000559151 ODF3Q96PU9 254 aa3.29□□□□□ -1.88
CASC4-208ENST00000559151 A0A1W2PPM0 123 aa3.28□□□□□ -1.88
CASC4-208ENST00000559151 hDV103S1A0JD37 113 aa3.28□□□□□ -1.88
CASC4-208ENST00000559151 NUPR1O60356 82 aa3.28□□□□□ -1.88
CASC4-208ENST00000559151 ROMO1P60602 79 aa3.28□□□□□ -1.88
CASC4-208ENST00000559151 BVES-AS1Q5T3Y7 98 aa3.28□□□□□ -1.88
CASC4-208ENST00000559151 MGST2Q99735 147 aa3.28□□□□□ -1.88
CASC4-208ENST00000559151 ABCA4P78363 2273 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 MEGF8Q7Z7M0 2845 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 IGKV2D-26A0A0A0MRZ7 120 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 PIGBOS1A0A0B4J2F0 54 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 IGLV1-51P01701 117 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 COX6B1P14854 86 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 KRTDAPP60985 99 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
CASC4-208ENST00000559151 S100A7L2Q5SY68 101 aa3.27□□□□□ -1.89
CASC4-208ENST00000559151 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms