RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 A0A087WYN8 130 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 LOC107984640A0A0U1RRK4 108 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 PRSS2P07478 247 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 MAJINQ3KP22 176 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 C6orf226Q5I0X4 101 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 Q5VSD8 79 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 Q8IZM0 81 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
LRRC28-206ENST00000558471 TRAV12-1A0A0B4J245 112 aa7.92□□□□□ -1.14
LRRC28-206ENST00000558471 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
LRRC28-206ENST00000558471 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
LRRC28-206ENST00000558471 LEPROTL1O95214 131 aa7.92□□□□□ -1.14
LRRC28-206ENST00000558471 SPINK8P0C7L1 97 aa7.92□□□□□ -1.14
LRRC28-206ENST00000558471 ZNF22P17026 224 aaPredicted RBP7.92□□□□□ -1.14
LRRC28-206ENST00000558471 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
LRRC28-206ENST00000558471 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
LRRC28-206ENST00000558471 CHTOPQ9Y3Y2 248 aaKnown RBP7.92□□□□□ -1.14
LRRC28-206ENST00000558471 H3BRM9 83 aa7.91□□□□□ -1.14
LRRC28-206ENST00000558471 FABP4P15090 132 aa7.91□□□□□ -1.14
LRRC28-206ENST00000558471 PTTG1IPP53801 180 aa7.91□□□□□ -1.14
LRRC28-206ENST00000558471 CKS1BP61024 79 aa7.91□□□□□ -1.14
LRRC28-206ENST00000558471 TRBV30A0A0K0K1B3 111 aa7.9□□□□□ -1.14
LRRC28-206ENST00000558471 RPL18AQ02543 176 aaKnown RBP7.9□□□□□ -1.14
LRRC28-206ENST00000558471 STPG4Q8N801 248 aa7.9□□□□□ -1.14
LRRC28-206ENST00000558471 COX7B2Q8TF08 81 aa7.9□□□□□ -1.14
LRRC28-206ENST00000558471 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
LRRC28-206ENST00000558471 LINC00474Q9P2X8 69 aa7.9□□□□□ -1.14
LRRC28-206ENST00000558471 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
LRRC28-206ENST00000558471 C9orf116Q5BN46 136 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-206ENST00000558471 HSPB8Q9UJY1 196 aa7.89□□□□□ -1.15
LRRC28-206ENST00000558471 IGLV5-39A0A0G2JS06 123 aa7.88□□□□□ -1.15
LRRC28-206ENST00000558471 F8VRH5 84 aa7.88□□□□□ -1.15
LRRC28-206ENST00000558471 H0Y8G0 127 aa7.88□□□□□ -1.15
LRRC28-206ENST00000558471 TMEM170BQ5T4T1 132 aa7.88□□□□□ -1.15
LRRC28-206ENST00000558471 Q6ZRP5 223 aa7.88□□□□□ -1.15
LRRC28-206ENST00000558471 CXCL5P42830 114 aa7.87□□□□□ -1.15
LRRC28-206ENST00000558471 ODF1Q14990 250 aa7.87□□□□□ -1.15
LRRC28-206ENST00000558471 A0A1W2PNN7 141 aa7.86□□□□□ -1.15
LRRC28-206ENST00000558471 NDUFC2-KCTD14E9PQ53 114 aa7.86□□□□□ -1.15
LRRC28-206ENST00000558471 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
LRRC28-206ENST00000558471 GAGE2EQ4V326 116 aa7.86□□□□□ -1.15
LRRC28-206ENST00000558471 COA6Q5JTJ3 125 aaKnown RBP7.86□□□□□ -1.15
LRRC28-206ENST00000558471 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
LRRC28-206ENST00000558471 ABCA13Q86UQ4 5058 aa7.85□□□□□ -1.15
LRRC28-206ENST00000558471 TMEM223A0PJW6 202 aa7.85□□□□□ -1.15
LRRC28-206ENST00000558471 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-206ENST00000558471 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
LRRC28-206ENST00000558471 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
LRRC28-206ENST00000558471 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
LRRC28-206ENST00000558471 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
LRRC28-206ENST00000558471 INAFM2P0DMQ5 153 aa7.83□□□□□ -1.16
LRRC28-206ENST00000558471 RPL37AP61513 92 aaKnown RBP7.83□□□□□ -1.16
LRRC28-206ENST00000558471 PMCHL2Q9BQD1 86 aa7.83□□□□□ -1.16
LRRC28-206ENST00000558471 C9orf129Q5T035 196 aaKnown RBP7.82□□□□□ -1.16
LRRC28-206ENST00000558471 PCLOQ9Y6V0 5065 aa7.82□□□□□ -1.16
LRRC28-206ENST00000558471 SYS1-DBNDD2H3BUS1 97 aa7.81□□□□□ -1.16
LRRC28-206ENST00000558471 DPM2O94777 84 aa7.81□□□□□ -1.16
LRRC28-206ENST00000558471 KRTAP7-1Q8IUC3 87 aa7.81□□□□□ -1.16
LRRC28-206ENST00000558471 C7orf33Q8WU49 177 aa7.81□□□□□ -1.16
LRRC28-206ENST00000558471 IGKCP01834 107 aa7.8□□□□□ -1.16
LRRC28-206ENST00000558471 PLNP26678 52 aa7.8□□□□□ -1.16
LRRC28-206ENST00000558471 ZNF625Q96I27 306 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-206ENST00000558471 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
LRRC28-206ENST00000558471 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
LRRC28-206ENST00000558471 FAM19A5Q7Z5A7 132 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-206ENST00000558471 PFN2P35080 140 aa7.78□□□□□ -1.16
LRRC28-206ENST00000558471 C3orf79P0CE67 100 aa7.77□□□□□ -1.17
LRRC28-206ENST00000558471 HNRNPA3P51991 378 aaKnown RBP7.77□□□□□ -1.17
LRRC28-206ENST00000558471 LINC01545Q5VT33 79 aa7.77□□□□□ -1.17
LRRC28-206ENST00000558471 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
LRRC28-206ENST00000558471 PET117Q6UWS5 81 aa7.77□□□□□ -1.17
LRRC28-206ENST00000558471 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
LRRC28-206ENST00000558471 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-206ENST00000558471 LEPROTO15243 131 aa7.76□□□□□ -1.17
LRRC28-206ENST00000558471 SERTAD4-AS1Q5TG53 156 aa7.76□□□□□ -1.17
LRRC28-206ENST00000558471 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
LRRC28-206ENST00000558471 KRTDAPP60985 99 aa7.75□□□□□ -1.17
LRRC28-206ENST00000558471 HERVK_113P61574 105 aa7.75□□□□□ -1.17
LRRC28-206ENST00000558471 PRR3P79522 188 aaKnown RBP7.75□□□□□ -1.17
LRRC28-206ENST00000558471 COX17Q14061 63 aa7.75□□□□□ -1.17
LRRC28-206ENST00000558471 M0QXV9 152 aa7.74□□□□□ -1.17
LRRC28-206ENST00000558471 KRTAP11-1Q8IUC1 163 aa7.74□□□□□ -1.17
LRRC28-206ENST00000558471 HIST3H2BBQ8N257 126 aa7.74□□□□□ -1.17
LRRC28-206ENST00000558471 PLEKHB2Q96CS7 222 aa7.74□□□□□ -1.17
LRRC28-206ENST00000558471 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
LRRC28-206ENST00000558471 C22orf24Q9Y442 160 aa7.74□□□□□ -1.17
LRRC28-206ENST00000558471 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
LRRC28-206ENST00000558471 J3QQQ9 107 aa7.73□□□□□ -1.17
LRRC28-206ENST00000558471 LINC00158P58513 81 aa7.73□□□□□ -1.17
LRRC28-206ENST00000558471 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
LRRC28-206ENST00000558471 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
LRRC28-206ENST00000558471 PLA2G2DQ9UNK4 145 aa7.73□□□□□ -1.17
LRRC28-206ENST00000558471 MYMXA0A1B0GTQ4 84 aa7.72□□□□□ -1.17
LRRC28-206ENST00000558471 E9PLD3 99 aa7.72□□□□□ -1.17
LRRC28-206ENST00000558471 S100A6P06703 90 aa7.72□□□□□ -1.17
LRRC28-206ENST00000558471 SMIM13P0DJ93 91 aa7.72□□□□□ -1.17
LRRC28-206ENST00000558471 HERV-K104P63124 156 aa7.72□□□□□ -1.17
LRRC28-206ENST00000558471 PKHD1L1Q86WI1 4243 aa7.72□□□□□ -1.17
LRRC28-206ENST00000558471 LGALS3P17931 250 aaKnown RBP7.71□□□□□ -1.18
LRRC28-206ENST00000558471 S100A2P29034 98 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms