RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 CLECL1Q8IZS7 167 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 VSTM2AQ8TAG5 236 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 NDUFB11Q9NX14 153 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 PSORS1C2Q9UIG4 136 aa2.43□□□□□ -2.02
LRRC28-205ENST00000558248 IGKV2D-26A0A0A0MRZ7 120 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 TRAV3A0A0B4J244 114 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 PIGBOS1A0A0B4J2F0 54 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 LOC107984156A0A0G2JMH3 177 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 NUPR2A6NF83 97 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 IQCF6A8MYZ5 107 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 OOSP1A8MZH6 123 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 J3QLW9 94 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 HMGN4O00479 90 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 CRPP02741 224 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 TFF1P04155 84 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 GYPBP06028 91 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 MIFP14174 115 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 C12orf73Q69YU5 71 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 TMEM136Q6ZRR5 245 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 KRTAP11-1Q8IUC1 163 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 ARL17AQ8IVW1 177 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 SPTSSAQ969W0 71 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 LINC00167Q96N53 147 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 TMEM242Q9NWH2 141 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 HILPDAQ9Y5L2 63 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 R4GN34 69 aa2.42□□□□□ -2.02
LRRC28-205ENST00000558248 A0A087WSZ3 146 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 A0A1B0GWA3 101 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 COLCA2A8K830 154 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 HMSDA8MTL9 139 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 RTL8CO15255 209 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 EDF1O60869 148 aaKnown RBP2.41□□□□□ -2.02
LRRC28-205ENST00000558248 SNCGO76070 127 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 IL5P05113 134 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 PIPP12273 146 aaPredicted RBP2.41□□□□□ -2.02
LRRC28-205ENST00000558248 NPC2P61916 151 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 C10orf128Q5T292 105 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 LINC00322Q6ZN03 302 aaPredicted RBP2.41□□□□□ -2.02
LRRC28-205ENST00000558248 TSKUQ8WUA8 353 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 LSM10Q969L4 123 aaKnown RBP2.41□□□□□ -2.02
LRRC28-205ENST00000558248 C20orf166-AS1Q96NR2 134 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 WFDC6Q9BQY6 131 aa2.41□□□□□ -2.02
LRRC28-205ENST00000558248 SRRM2Q9UQ35 2752 aaKnown RBP2.41□□□□□ -2.02
LRRC28-205ENST00000558248 H3BQ15 152 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 CCL3L1P16619 93 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 S100A3P33764 101 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 ERHP84090 104 aaKnown RBP2.4□□□□□ -2.03
LRRC28-205ENST00000558248 SLC25A26Q70HW3 274 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 ARPINQ7Z6K5 226 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 LINC00269Q8N2A0 174 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 TMEM254Q8TBM7 123 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 GAFA1Q96PS6 74 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 KLK12Q9UKR0 248 aa2.4□□□□□ -2.03
LRRC28-205ENST00000558248 TRAV2A0A0B4J234 112 aa2.39□□□□□ -2.03
LRRC28-205ENST00000558248 ODF3BA8MYP8 253 aa2.39□□□□□ -2.03
LRRC28-205ENST00000558248 SSSCA1O60232 199 aa2.39□□□□□ -2.03
LRRC28-205ENST00000558248 POLR2JP52435 117 aaKnown RBP2.39□□□□□ -2.03
LRRC28-205ENST00000558248 CAV3P56539 151 aa2.39□□□□□ -2.03
LRRC28-205ENST00000558248 C4orf3Q8WVX3 66 aa2.39□□□□□ -2.03
LRRC28-205ENST00000558248 VAMP8Q9BV40 100 aa2.39□□□□□ -2.03
LRRC28-205ENST00000558248 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
LRRC28-205ENST00000558248 FLG2Q5D862 2391 aaPredicted RBP2.38□□□□□ -2.03
LRRC28-205ENST00000558248 IGLV4-60A0A075B6I1 120 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 TRAV1-1A0A0B4J248 108 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 MUC21A0A0G2JKD1 596 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 G3V3Q6 166 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 M0R2N4 97 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 ASAH2BP0C7U1 165 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 HINT1P49773 126 aaPredicted RBP2.38□□□□□ -2.03
LRRC28-205ENST00000558248 PYY3Q5JQD4 70 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 C2orf82Q6UX34 121 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 FP248Q71RG6 208 aaPredicted RBP2.38□□□□□ -2.03
LRRC28-205ENST00000558248 FAM19A2Q8N3H0 131 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 DYNLRB2Q8TF09 96 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 Q9BRP9 147 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 DPH3P1Q9H4G8 78 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 HSPG2P98160 4391 aa2.38□□□□□ -2.03
LRRC28-205ENST00000558248 IGKV1D-17A0A075B6S4 117 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 TMSB15BA0A087X1C1 80 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 TRAV14DV4A0A0A6YYC5 116 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 TRAV10A0A0B4J240 114 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 IBA57-AS1B1ANH7 110 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 ERC2-IT1O76042 136 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 IGLC1P0CG04 106 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 IQCJQ1A5X6 159 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 MINOS1Q5TGZ0 78 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 SPANXN1Q5VSR9 72 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 CASC2Q6XLA1 102 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 Q8N9L7 120 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 ZNF431Q8TF32 576 aaPredicted RBP2.37□□□□□ -2.03
LRRC28-205ENST00000558248 ATG5Q9H1Y0 275 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 BET1LQ9NYM9 111 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 LHFPL6Q9Y693 200 aa2.37□□□□□ -2.03
LRRC28-205ENST00000558248 MUC21A0A140T8X8 626 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 A6NIN4 97 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 COX7CP15954 63 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 C5orf38Q86SI9 138 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 DEFB107AQ8IZN7 70 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 C5orf56Q8N8D9 126 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms