RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CKS1BP61024 79 aa6.78□□□□□ -1.32
LRRC28-204ENST00000558172 RNF151Q2KHN1 245 aa6.78□□□□□ -1.32
LRRC28-204ENST00000558172 LINC01545Q5VT33 79 aa6.78□□□□□ -1.32
LRRC28-204ENST00000558172 COX7B2Q8TF08 81 aa6.78□□□□□ -1.32
LRRC28-204ENST00000558172 HIST1H2BLQ99880 126 aa6.78□□□□□ -1.32
LRRC28-204ENST00000558172 IGLV5-39A0A0G2JS06 123 aa6.77□□□□□ -1.33
LRRC28-204ENST00000558172 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
LRRC28-204ENST00000558172 C20orf202A1L168 122 aa6.77□□□□□ -1.33
LRRC28-204ENST00000558172 Q6ZRU5 148 aa6.77□□□□□ -1.33
LRRC28-204ENST00000558172 TRBV30A0A0K0K1B3 111 aa6.76□□□□□ -1.33
LRRC28-204ENST00000558172 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
LRRC28-204ENST00000558172 PMCHL2Q9BQD1 86 aa6.76□□□□□ -1.33
LRRC28-204ENST00000558172 HERVK_113P61574 105 aa6.75□□□□□ -1.33
LRRC28-204ENST00000558172 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
LRRC28-204ENST00000558172 SFTA2Q6UW10 78 aa6.75□□□□□ -1.33
LRRC28-204ENST00000558172 UNQ6190/PRO20217Q6UXQ8 127 aa6.75□□□□□ -1.33
LRRC28-204ENST00000558172 SDIM1Q6ZPB5 146 aa6.75□□□□□ -1.33
LRRC28-204ENST00000558172 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
LRRC28-204ENST00000558172 C2orf82Q6UX34 121 aa6.74□□□□□ -1.33
LRRC28-204ENST00000558172 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
LRRC28-204ENST00000558172 TLX1NBP0CAT3 122 aa6.73□□□□□ -1.33
LRRC28-204ENST00000558172 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
LRRC28-204ENST00000558172 PLEKHB2Q96CS7 222 aa6.73□□□□□ -1.33
LRRC28-204ENST00000558172 C6orf48Q9UBA6 75 aa6.73□□□□□ -1.33
LRRC28-204ENST00000558172 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
LRRC28-204ENST00000558172 LEPROTO15243 131 aa6.72□□□□□ -1.33
LRRC28-204ENST00000558172 Q6ZSA8 131 aa6.72□□□□□ -1.33
LRRC28-204ENST00000558172 LINC00474Q9P2X8 69 aa6.72□□□□□ -1.33
LRRC28-204ENST00000558172 E9PLD3 99 aa6.71□□□□□ -1.34
LRRC28-204ENST00000558172 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
LRRC28-204ENST00000558172 CDK2AP2O75956 126 aa6.71□□□□□ -1.34
LRRC28-204ENST00000558172 TMA7Q9Y2S6 64 aaKnown RBP6.71□□□□□ -1.34
LRRC28-204ENST00000558172 HERV-K104P63124 156 aa6.7□□□□□ -1.34
LRRC28-204ENST00000558172 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
LRRC28-204ENST00000558172 FAM30AQ9NZY2 134 aa6.7□□□□□ -1.34
LRRC28-204ENST00000558172 A0A096LNI7 61 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 MYMXA0A1B0GTQ4 84 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 J3QQQ9 107 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 LGALS3P17931 250 aaKnown RBP6.69□□□□□ -1.34
LRRC28-204ENST00000558172 NMUP48645 174 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 PTTG1IPP53801 180 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 RPL18AQ02543 176 aaKnown RBP6.69□□□□□ -1.34
LRRC28-204ENST00000558172 GAGE2BQ13066 116 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 COX17Q14061 63 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 STPG4Q8N801 248 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 DPH3Q96FX2 82 aa6.69□□□□□ -1.34
LRRC28-204ENST00000558172 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-204ENST00000558172 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
LRRC28-204ENST00000558172 SCGB1D1O95968 90 aa6.68□□□□□ -1.34
LRRC28-204ENST00000558172 C9orf116Q5BN46 136 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-204ENST00000558172 Q6ZRP5 223 aa6.68□□□□□ -1.34
LRRC28-204ENST00000558172 SPACA4Q8TDM5 124 aa6.68□□□□□ -1.34
LRRC28-204ENST00000558172 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
LRRC28-204ENST00000558172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-204ENST00000558172 XGP55808 180 aa6.67□□□□□ -1.34
LRRC28-204ENST00000558172 MAJINQ3KP22 176 aa6.67□□□□□ -1.34
LRRC28-204ENST00000558172 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
LRRC28-204ENST00000558172 RYR1P21817 5038 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 HSBP1L1C9JCN9 74 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 PANO1I0J062 215 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 CHTF8P0CG12 524 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 GAGE2EQ4V326 116 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 GAGE2DQ9UEU5 116 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 KIAA1109Q2LD37 5005 aa6.66□□□□□ -1.34
LRRC28-204ENST00000558172 A0A087WYN8 130 aa6.65□□□□□ -1.34
LRRC28-204ENST00000558172 PFN2P35080 140 aa6.65□□□□□ -1.34
LRRC28-204ENST00000558172 MEIG1Q5JSS6 88 aa6.65□□□□□ -1.34
LRRC28-204ENST00000558172 SCXQ7RTU7 201 aa6.65□□□□□ -1.34
LRRC28-204ENST00000558172 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.34
LRRC28-204ENST00000558172 IGKV2D-26A0A0A0MRZ7 120 aa6.64□□□□□ -1.35
LRRC28-204ENST00000558172 LINC00158P58513 81 aa6.64□□□□□ -1.35
LRRC28-204ENST00000558172 JOSD1Q15040 202 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-204ENST00000558172 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
LRRC28-204ENST00000558172 HSPG2P98160 4391 aa6.63□□□□□ -1.35
LRRC28-204ENST00000558172 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
LRRC28-204ENST00000558172 EPM2AB3EWF7 344 aa6.62□□□□□ -1.35
LRRC28-204ENST00000558172 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
LRRC28-204ENST00000558172 C9orf129Q5T035 196 aaKnown RBP6.62□□□□□ -1.35
LRRC28-204ENST00000558172 XAGE1AQ9HD64 81 aa6.62□□□□□ -1.35
LRRC28-204ENST00000558172 A0A0J9YXY3 114 aa6.61□□□□□ -1.35
LRRC28-204ENST00000558172 A0A1W2PNN7 141 aa6.61□□□□□ -1.35
LRRC28-204ENST00000558172 HAMPP81172 84 aa6.61□□□□□ -1.35
LRRC28-204ENST00000558172 SND1-IT1Q9HBX3 110 aa6.61□□□□□ -1.35
LRRC28-204ENST00000558172 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
LRRC28-204ENST00000558172 A0A0U1RRA0 63 aa6.6□□□□□ -1.35
LRRC28-204ENST00000558172 TIMM17BO60830 172 aa6.6□□□□□ -1.35
LRRC28-204ENST00000558172 FAT1Q14517 4588 aa6.59□□□□□ -1.35
LRRC28-204ENST00000558172 RPL24P83731 157 aaKnown RBP6.59□□□□□ -1.35
LRRC28-204ENST00000558172 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
LRRC28-204ENST00000558172 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
LRRC28-204ENST00000558172 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
LRRC28-204ENST00000558172 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
LRRC28-204ENST00000558172 SMR3BP02814 79 aaPredicted RBP6.58□□□□□ -1.36
LRRC28-204ENST00000558172 PYY3Q5JQD4 70 aa6.58□□□□□ -1.36
LRRC28-204ENST00000558172 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
LRRC28-204ENST00000558172 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms