RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 C10orf25Q5T742 122 aa5.71□□□□□ -1.5
SPG11-207ENST00000558138 FAM19A2Q8N3H0 131 aa5.71□□□□□ -1.5
SPG11-207ENST00000558138 COX7B2Q8TF08 81 aa5.71□□□□□ -1.5
SPG11-207ENST00000558138 IFI27L1Q96BM0 104 aa5.71□□□□□ -1.5
SPG11-207ENST00000558138 KRTAP17-1Q9BYP8 105 aa5.71□□□□□ -1.5
SPG11-207ENST00000558138 C6orf48Q9UBA6 75 aa5.71□□□□□ -1.5
SPG11-207ENST00000558138 CHTOPQ9Y3Y2 248 aaKnown RBP5.71□□□□□ -1.5
SPG11-207ENST00000558138 SERF1AO75920 110 aa5.7□□□□□ -1.5
SPG11-207ENST00000558138 CXCL5P42830 114 aa5.7□□□□□ -1.5
SPG11-207ENST00000558138 SMIM1B2RUZ4 78 aa5.69□□□□□ -1.5
SPG11-207ENST00000558138 F8VRH5 84 aa5.69□□□□□ -1.5
SPG11-207ENST00000558138 LEPROTL1O95214 131 aa5.69□□□□□ -1.5
SPG11-207ENST00000558138 IGLC3P0DOY3 106 aa5.69□□□□□ -1.5
SPG11-207ENST00000558138 KIAA0087Q14695 138 aa5.69□□□□□ -1.5
SPG11-207ENST00000558138 PLAC8Q9NZF1 115 aa5.69□□□□□ -1.5
SPG11-207ENST00000558138 HSPB8Q9UJY1 196 aa5.69□□□□□ -1.5
SPG11-207ENST00000558138 FABP4P15090 132 aa5.68□□□□□ -1.5
SPG11-207ENST00000558138 C9orf116Q5BN46 136 aaPredicted RBP5.68□□□□□ -1.5
SPG11-207ENST00000558138 Q6ZRP5 223 aa5.68□□□□□ -1.5
SPG11-207ENST00000558138 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
SPG11-207ENST00000558138 IGLV5-45A0A087WSX0 123 aa5.67□□□□□ -1.5
SPG11-207ENST00000558138 C11orf86A6NJI1 115 aa5.67□□□□□ -1.5
SPG11-207ENST00000558138 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
SPG11-207ENST00000558138 ZNF22P17026 224 aaPredicted RBP5.67□□□□□ -1.5
SPG11-207ENST00000558138 TRAV12-1A0A0B4J245 112 aa5.66□□□□□ -1.5
SPG11-207ENST00000558138 TLX1NBP0CAT3 122 aa5.66□□□□□ -1.5
SPG11-207ENST00000558138 A0A1W2PNN7 141 aa5.65□□□□□ -1.5
SPG11-207ENST00000558138 S100A1P23297 94 aa5.65□□□□□ -1.5
SPG11-207ENST00000558138 UBE2BP63146 152 aa5.65□□□□□ -1.5
SPG11-207ENST00000558138 PHF5AQ7RTV0 110 aaKnown RBP5.65□□□□□ -1.5
SPG11-207ENST00000558138 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
SPG11-207ENST00000558138 FAM168BA1KXE4 195 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 J3QL48 77 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 M0QXV9 152 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BKO60814 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BJP06899 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BOP23527 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BBP33778 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 PFN2P35080 140 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BDP58876 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BCP62807 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST2H2BEQ16778 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BHQ93079 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 ZNF625Q96I27 306 aaPredicted RBP5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BNQ99877 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 HIST1H2BMQ99879 126 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 DNAH8Q96JB1 4490 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
SPG11-207ENST00000558138 NUPR1O60356 82 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 ATP6V1G1O75348 118 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 PLNP26678 52 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 LINC00310P59036 64 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 HERVK_113P61574 105 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 PRR3P79522 188 aaKnown RBP5.63□□□□□ -1.51
SPG11-207ENST00000558138 SFTA2Q6UW10 78 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
SPG11-207ENST00000558138 IGLV5-39A0A0G2JS06 123 aa5.62□□□□□ -1.51
SPG11-207ENST00000558138 TMEM223A0PJW6 202 aa5.62□□□□□ -1.51
SPG11-207ENST00000558138 ODF1Q14990 250 aa5.62□□□□□ -1.51
SPG11-207ENST00000558138 MEIG1Q5JSS6 88 aa5.62□□□□□ -1.51
SPG11-207ENST00000558138 C1orf137Q5JT78 98 aa5.62□□□□□ -1.51
SPG11-207ENST00000558138 C9orf129Q5T035 196 aaKnown RBP5.62□□□□□ -1.51
SPG11-207ENST00000558138 DPM2O94777 84 aa5.61□□□□□ -1.51
SPG11-207ENST00000558138 IGKCP01834 107 aa5.61□□□□□ -1.51
SPG11-207ENST00000558138 NKAPP1Q8N9T2 125 aa5.61□□□□□ -1.51
SPG11-207ENST00000558138 PMCHL2Q9BQD1 86 aa5.61□□□□□ -1.51
SPG11-207ENST00000558138 ERG28Q9UKR5 140 aa5.61□□□□□ -1.51
SPG11-207ENST00000558138 A0A0U1RRA0 63 aa5.6□□□□□ -1.51
SPG11-207ENST00000558138 LINC00158P58513 81 aa5.6□□□□□ -1.51
SPG11-207ENST00000558138 LBHQ53QV2 105 aaPredicted RBP5.6□□□□□ -1.51
SPG11-207ENST00000558138 SRRM2Q9UQ35 2752 aaKnown RBP5.59□□□□□ -1.51
SPG11-207ENST00000558138 LGALS3P17931 250 aaKnown RBP5.59□□□□□ -1.51
SPG11-207ENST00000558138 HNRNPA3P51991 378 aaKnown RBP5.59□□□□□ -1.51
SPG11-207ENST00000558138 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
SPG11-207ENST00000558138 PLEKHB2Q96CS7 222 aa5.59□□□□□ -1.51
SPG11-207ENST00000558138 PSORS1C2Q9UIG4 136 aa5.59□□□□□ -1.51
SPG11-207ENST00000558138 MYMXA0A1B0GTQ4 84 aa5.58□□□□□ -1.52
SPG11-207ENST00000558138 LEPROTO15243 131 aa5.58□□□□□ -1.52
SPG11-207ENST00000558138 KRTDAPP60985 99 aa5.58□□□□□ -1.52
SPG11-207ENST00000558138 COX17Q14061 63 aa5.58□□□□□ -1.52
SPG11-207ENST00000558138 SERTAD4-AS1Q5TG53 156 aa5.58□□□□□ -1.52
SPG11-207ENST00000558138 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
SPG11-207ENST00000558138 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
SPG11-207ENST00000558138 C20orf202A1L168 122 aa5.57□□□□□ -1.52
SPG11-207ENST00000558138 GAGE10A6NGK3 116 aa5.57□□□□□ -1.52
SPG11-207ENST00000558138 SYS1-DBNDD2H3BUS1 97 aa5.57□□□□□ -1.52
SPG11-207ENST00000558138 S100A6P06703 90 aa5.57□□□□□ -1.52
SPG11-207ENST00000558138 HERV-K104P63124 156 aa5.57□□□□□ -1.52
SPG11-207ENST00000558138 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
SPG11-207ENST00000558138 MRPL55Q7Z7F7 128 aaKnown RBP5.57□□□□□ -1.52
SPG11-207ENST00000558138 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
SPG11-207ENST00000558138 FAT1Q14517 4588 aa5.57□□□□□ -1.52
SPG11-207ENST00000558138 LINC00587B1AMM8 73 aa5.56□□□□□ -1.52
SPG11-207ENST00000558138 SMIM13P0DJ93 91 aa5.56□□□□□ -1.52
SPG11-207ENST00000558138 S100A2P29034 98 aa5.56□□□□□ -1.52
SPG11-207ENST00000558138 REG3GQ6UW15 175 aa5.56□□□□□ -1.52
SPG11-207ENST00000558138 SPINK6Q6UWN8 80 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms