RNA–Protein interactions for RNA: ENST00000557488.1

ITGA7-219, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 296 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-219ENST00000557488 HIST1H2BNQ99877 126 aa9.11□□□□□ -0.95
ITGA7-219ENST00000557488 HIST1H2BMQ99879 126 aa9.11□□□□□ -0.95
ITGA7-219ENST00000557488 MRPL35Q9NZE8 188 aaKnown RBP9.11□□□□□ -0.95
ITGA7-219ENST00000557488 ATP5LO75964 103 aa9.1□□□□□ -0.95
ITGA7-219ENST00000557488 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
ITGA7-219ENST00000557488 SEC11AP67812 179 aa9.1□□□□□ -0.95
ITGA7-219ENST00000557488 IFI27L1Q96BM0 104 aa9.1□□□□□ -0.95
ITGA7-219ENST00000557488 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
ITGA7-219ENST00000557488 VPS13BQ7Z7G8 4022 aa9.09□□□□□ -0.95
ITGA7-219ENST00000557488 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
ITGA7-219ENST00000557488 NDUFA1O15239 70 aa9.09□□□□□ -0.95
ITGA7-219ENST00000557488 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
ITGA7-219ENST00000557488 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
ITGA7-219ENST00000557488 STPG4Q8N801 248 aa9.09□□□□□ -0.95
ITGA7-219ENST00000557488 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
ITGA7-219ENST00000557488 Q6ZRP5 223 aa9.08□□□□□ -0.96
ITGA7-219ENST00000557488 FABP4P15090 132 aa9.07□□□□□ -0.96
ITGA7-219ENST00000557488 C6orf226Q5I0X4 101 aa9.07□□□□□ -0.96
ITGA7-219ENST00000557488 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
ITGA7-219ENST00000557488 Q8IZM0 81 aa9.07□□□□□ -0.96
ITGA7-219ENST00000557488 CHTOPQ9Y3Y2 248 aaKnown RBP9.07□□□□□ -0.96
ITGA7-219ENST00000557488 FAM168BA1KXE4 195 aa9.06□□□□□ -0.96
ITGA7-219ENST00000557488 F8WDY8 70 aa9.06□□□□□ -0.96
ITGA7-219ENST00000557488 HNRNPA3P51991 378 aaKnown RBP9.06□□□□□ -0.96
ITGA7-219ENST00000557488 RPL18AQ02543 176 aaKnown RBP9.06□□□□□ -0.96
ITGA7-219ENST00000557488 COX7B2Q8TF08 81 aa9.06□□□□□ -0.96
ITGA7-219ENST00000557488 PACRGQ96M98 296 aaPredicted RBP9.06□□□□□ -0.96
ITGA7-219ENST00000557488 PCLOQ9Y6V0 5065 aa9.06□□□□□ -0.96
ITGA7-219ENST00000557488 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
ITGA7-219ENST00000557488 PRSS2P07478 247 aa9.05□□□□□ -0.96
ITGA7-219ENST00000557488 INAFM2P0DMQ5 153 aa9.05□□□□□ -0.96
ITGA7-219ENST00000557488 GAGE2EQ4V326 116 aa9.05□□□□□ -0.96
ITGA7-219ENST00000557488 GAGE2DQ9UEU5 116 aa9.05□□□□□ -0.96
ITGA7-219ENST00000557488 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
ITGA7-219ENST00000557488 IGLV5-39A0A0G2JS06 123 aa9.04□□□□□ -0.96
ITGA7-219ENST00000557488 H0Y8G0 127 aa9.04□□□□□ -0.96
ITGA7-219ENST00000557488 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
ITGA7-219ENST00000557488 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
ITGA7-219ENST00000557488 S100A1P23297 94 aa9.04□□□□□ -0.96
ITGA7-219ENST00000557488 CKS1BP61024 79 aa9.03□□□□□ -0.96
ITGA7-219ENST00000557488 ODF1Q14990 250 aa9.03□□□□□ -0.96
ITGA7-219ENST00000557488 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
ITGA7-219ENST00000557488 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
ITGA7-219ENST00000557488 TRBV30A0A0K0K1B3 111 aa9.02□□□□□ -0.97
ITGA7-219ENST00000557488 TMEM170BQ5T4T1 132 aa9.02□□□□□ -0.97
ITGA7-219ENST00000557488 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
ITGA7-219ENST00000557488 SRRM2Q9UQ35 2752 aaKnown RBP9.01□□□□□ -0.97
ITGA7-219ENST00000557488 TMEM223A0PJW6 202 aa9.01□□□□□ -0.97
ITGA7-219ENST00000557488 F8VRH5 84 aa9.01□□□□□ -0.97
ITGA7-219ENST00000557488 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
ITGA7-219ENST00000557488 PHF5AQ7RTV0 110 aaKnown RBP9.01□□□□□ -0.97
ITGA7-219ENST00000557488 H3BRM9 83 aa9□□□□□ -0.97
ITGA7-219ENST00000557488 PLA2G1BP04054 148 aaKnown RBP9□□□□□ -0.97
ITGA7-219ENST00000557488 NDUFC2-KCTD14E9PQ53 114 aa8.99□□□□□ -0.97
ITGA7-219ENST00000557488 XAGE1AQ9HD64 81 aa8.99□□□□□ -0.97
ITGA7-219ENST00000557488 LINC00474Q9P2X8 69 aa8.99□□□□□ -0.97
ITGA7-219ENST00000557488 PKHD1L1Q86WI1 4243 aa8.98□□□□□ -0.97
ITGA7-219ENST00000557488 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
ITGA7-219ENST00000557488 ZNF625Q96I27 306 aaPredicted RBP8.98□□□□□ -0.97
ITGA7-219ENST00000557488 SERTAD4-AS1Q5TG53 156 aa8.97□□□□□ -0.97
ITGA7-219ENST00000557488 HSPB8Q9UJY1 196 aa8.97□□□□□ -0.97
ITGA7-219ENST00000557488 CXCL5P42830 114 aa8.96□□□□□ -0.98
ITGA7-219ENST00000557488 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.98
ITGA7-219ENST00000557488 PKIGQ9Y2B9 76 aa8.95□□□□□ -0.98
ITGA7-219ENST00000557488 PFN2P35080 140 aa8.94□□□□□ -0.98
ITGA7-219ENST00000557488 TSPEAR-AS2P59090 65 aa8.94□□□□□ -0.98
ITGA7-219ENST00000557488 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
ITGA7-219ENST00000557488 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
ITGA7-219ENST00000557488 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
ITGA7-219ENST00000557488 PRR3P79522 188 aaKnown RBP8.92□□□□□ -0.98
ITGA7-219ENST00000557488 Q8NDZ9 215 aa8.92□□□□□ -0.98
ITGA7-219ENST00000557488 C7orf33Q8WU49 177 aa8.92□□□□□ -0.98
ITGA7-219ENST00000557488 A0A0U1RRA0 63 aa8.91□□□□□ -0.98
ITGA7-219ENST00000557488 DPM2O94777 84 aa8.91□□□□□ -0.98
ITGA7-219ENST00000557488 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
ITGA7-219ENST00000557488 IGKCP01834 107 aa8.9□□□□□ -0.98
ITGA7-219ENST00000557488 ERG28Q9UKR5 140 aa8.9□□□□□ -0.98
ITGA7-219ENST00000557488 C22orf24Q9Y442 160 aa8.9□□□□□ -0.98
ITGA7-219ENST00000557488 M0QXV9 152 aa8.89□□□□□ -0.99
ITGA7-219ENST00000557488 LINC01545Q5VT33 79 aa8.89□□□□□ -0.99
ITGA7-219ENST00000557488 LEPROTO15243 131 aa8.88□□□□□ -0.99
ITGA7-219ENST00000557488 SRSF9Q13242 221 aaKnown RBP eCLIP8.88□□□□□ -0.99
ITGA7-219ENST00000557488 SND1-IT1Q9HBX3 110 aa8.88□□□□□ -0.99
ITGA7-219ENST00000557488 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
ITGA7-219ENST00000557488 SMIM13P0DJ93 91 aa8.87□□□□□ -0.99
ITGA7-219ENST00000557488 PLNP26678 52 aa8.87□□□□□ -0.99
ITGA7-219ENST00000557488 KRTDAPP60985 99 aa8.87□□□□□ -0.99
ITGA7-219ENST00000557488 PET117Q6UWS5 81 aa8.86□□□□□ -0.99
ITGA7-219ENST00000557488 HIST3H2BBQ8N257 126 aa8.86□□□□□ -0.99
ITGA7-219ENST00000557488 NDUFA12Q9UI09 145 aa8.86□□□□□ -0.99
ITGA7-219ENST00000557488 MYCBP2O75592 4640 aa8.85□□□□□ -0.99
ITGA7-219ENST00000557488 LINC00158P58513 81 aa8.85□□□□□ -0.99
ITGA7-219ENST00000557488 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
ITGA7-219ENST00000557488 PLA2G2DQ9UNK4 145 aa8.85□□□□□ -0.99
ITGA7-219ENST00000557488 FAT3Q8TDW7 4589 aa8.84□□□□□ -0.99
ITGA7-219ENST00000557488 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
ITGA7-219ENST00000557488 GAGE10A6NGK3 116 aa8.84□□□□□ -0.99
ITGA7-219ENST00000557488 J3QQQ9 107 aa8.84□□□□□ -0.99
ITGA7-219ENST00000557488 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
ITGA7-219ENST00000557488 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms