RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 PRSS2P07478 247 aa9.49□□□□□ -0.89
VIPAS39-210ENST00000557466 C6orf48Q9UBA6 75 aa9.49□□□□□ -0.89
VIPAS39-210ENST00000557466 CIRBPQ14011 172 aaKnown RBP9.48□□□□□ -0.89
VIPAS39-210ENST00000557466 TMEM170BQ5T4T1 132 aa9.48□□□□□ -0.89
VIPAS39-210ENST00000557466 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 RNF151Q2KHN1 245 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 C6orf226Q5I0X4 101 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 COX7B2Q8TF08 81 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 RYR1P21817 5038 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 HSPG2P98160 4391 aa9.47□□□□□ -0.89
VIPAS39-210ENST00000557466 IGLV5-39A0A0G2JS06 123 aa9.46□□□□□ -0.9
VIPAS39-210ENST00000557466 LOC107984640A0A0U1RRK4 108 aa9.46□□□□□ -0.9
VIPAS39-210ENST00000557466 CKS1BP61024 79 aa9.46□□□□□ -0.9
VIPAS39-210ENST00000557466 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.9
VIPAS39-210ENST00000557466 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
VIPAS39-210ENST00000557466 CXCL5P42830 114 aa9.44□□□□□ -0.9
VIPAS39-210ENST00000557466 PTTG1IPP53801 180 aa9.44□□□□□ -0.9
VIPAS39-210ENST00000557466 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-210ENST00000557466 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
VIPAS39-210ENST00000557466 TMEM223A0PJW6 202 aa9.43□□□□□ -0.9
VIPAS39-210ENST00000557466 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-210ENST00000557466 GAGE2BQ13066 116 aa9.43□□□□□ -0.9
VIPAS39-210ENST00000557466 MAJINQ3KP22 176 aa9.43□□□□□ -0.9
VIPAS39-210ENST00000557466 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-210ENST00000557466 A0A087WYN8 130 aa9.42□□□□□ -0.9
VIPAS39-210ENST00000557466 SYS1-DBNDD2H3BUS1 97 aa9.42□□□□□ -0.9
VIPAS39-210ENST00000557466 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
VIPAS39-210ENST00000557466 Q8N1X5 172 aa9.42□□□□□ -0.9
VIPAS39-210ENST00000557466 DPM2O94777 84 aa9.41□□□□□ -0.9
VIPAS39-210ENST00000557466 PLNP26678 52 aa9.41□□□□□ -0.9
VIPAS39-210ENST00000557466 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
VIPAS39-210ENST00000557466 Q6ZRP5 223 aa9.4□□□□□ -0.9
VIPAS39-210ENST00000557466 STPG4Q8N801 248 aa9.4□□□□□ -0.9
VIPAS39-210ENST00000557466 DPH3Q96FX2 82 aa9.4□□□□□ -0.9
VIPAS39-210ENST00000557466 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.9
VIPAS39-210ENST00000557466 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.9
VIPAS39-210ENST00000557466 PCLOQ9Y6V0 5065 aa9.39□□□□□ -0.91
VIPAS39-210ENST00000557466 NDUFC2-KCTD14E9PQ53 114 aa9.39□□□□□ -0.91
VIPAS39-210ENST00000557466 IGKCP01834 107 aa9.39□□□□□ -0.91
VIPAS39-210ENST00000557466 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
VIPAS39-210ENST00000557466 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
VIPAS39-210ENST00000557466 KRTDAPP60985 99 aa9.38□□□□□ -0.91
VIPAS39-210ENST00000557466 GAGE2EQ4V326 116 aa9.38□□□□□ -0.91
VIPAS39-210ENST00000557466 LINC01545Q5VT33 79 aa9.38□□□□□ -0.91
VIPAS39-210ENST00000557466 PET117Q6UWS5 81 aa9.38□□□□□ -0.91
VIPAS39-210ENST00000557466 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
VIPAS39-210ENST00000557466 GAGE2DQ9UEU5 116 aa9.38□□□□□ -0.91
VIPAS39-210ENST00000557466 S100A6P06703 90 aa9.37□□□□□ -0.91
VIPAS39-210ENST00000557466 Q5VSD8 79 aa9.37□□□□□ -0.91
VIPAS39-210ENST00000557466 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-210ENST00000557466 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
VIPAS39-210ENST00000557466 EPM2AB3EWF7 344 aa9.35□□□□□ -0.91
VIPAS39-210ENST00000557466 S100A2P29034 98 aa9.35□□□□□ -0.91
VIPAS39-210ENST00000557466 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
VIPAS39-210ENST00000557466 HIST1H2BLQ99880 126 aa9.35□□□□□ -0.91
VIPAS39-210ENST00000557466 HERVK_113P61574 105 aa9.34□□□□□ -0.91
VIPAS39-210ENST00000557466 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-210ENST00000557466 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
VIPAS39-210ENST00000557466 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
VIPAS39-210ENST00000557466 LEPROTO15243 131 aa9.33□□□□□ -0.92
VIPAS39-210ENST00000557466 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
VIPAS39-210ENST00000557466 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
VIPAS39-210ENST00000557466 XAGE1AQ9HD64 81 aa9.33□□□□□ -0.92
VIPAS39-210ENST00000557466 PLEKHB2Q96CS7 222 aa9.32□□□□□ -0.92
VIPAS39-210ENST00000557466 ERG28Q9UKR5 140 aa9.32□□□□□ -0.92
VIPAS39-210ENST00000557466 C20orf202A1L168 122 aa9.31□□□□□ -0.92
VIPAS39-210ENST00000557466 C5orf52A6NGY3 159 aa9.31□□□□□ -0.92
VIPAS39-210ENST00000557466 PFN2P35080 140 aa9.31□□□□□ -0.92
VIPAS39-210ENST00000557466 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-210ENST00000557466 KRTAP7-1Q8IUC3 87 aa9.31□□□□□ -0.92
VIPAS39-210ENST00000557466 NDUFA12Q9UI09 145 aa9.31□□□□□ -0.92
VIPAS39-210ENST00000557466 E9PLD3 99 aa9.3□□□□□ -0.92
VIPAS39-210ENST00000557466 J3QQQ9 107 aa9.3□□□□□ -0.92
VIPAS39-210ENST00000557466 FAT1Q14517 4588 aa9.29□□□□□ -0.92
VIPAS39-210ENST00000557466 PLA2G1BP04054 148 aaKnown RBP9.29□□□□□ -0.92
VIPAS39-210ENST00000557466 KRTAP10-4P60372 401 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-210ENST00000557466 RPL37AP61513 92 aaKnown RBP9.29□□□□□ -0.92
VIPAS39-210ENST00000557466 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 MYMXA0A1B0GTQ4 84 aa9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 LGALS3P17931 250 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 HERV-K104P63124 156 aa9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 COX17Q14061 63 aa9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 SERTAD4-AS1Q5TG53 156 aa9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
VIPAS39-210ENST00000557466 ATOH7Q8N100 152 aa9.27□□□□□ -0.93
VIPAS39-210ENST00000557466 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
VIPAS39-210ENST00000557466 M0QXV9 152 aa9.26□□□□□ -0.93
VIPAS39-210ENST00000557466 SMIM13P0DJ93 91 aa9.26□□□□□ -0.93
VIPAS39-210ENST00000557466 NMUP48645 174 aa9.26□□□□□ -0.93
VIPAS39-210ENST00000557466 LINC00158P58513 81 aa9.26□□□□□ -0.93
VIPAS39-210ENST00000557466 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
VIPAS39-210ENST00000557466 SND1-IT1Q9HBX3 110 aa9.26□□□□□ -0.93
VIPAS39-210ENST00000557466 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
VIPAS39-210ENST00000557466 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-210ENST00000557466 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
VIPAS39-210ENST00000557466 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms