RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 S100A1P23297 94 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 KIAA0087Q14695 138 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 MAJINQ3KP22 176 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 IFI27L1Q96BM0 104 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 MRPL35Q9NZE8 188 aaKnown RBP6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 A0A087WYN8 130 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 SMIM1B2RUZ4 78 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 H3BRM9 83 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 SPINK8P0C7L1 97 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 CKS1BP61024 79 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 RPL18AQ02543 176 aaKnown RBP6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 UNQ6190/PRO20217Q6UXQ8 127 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 Q8IZM0 81 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 PCLOQ9Y6V0 5065 aa6.74□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 PTTG1IPP53801 180 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 RNF151Q2KHN1 245 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 C6orf48Q9UBA6 75 aa6.73□□□□□ -1.33
HNRNPC-232ENST00000557442 TRBV30A0A0K0K1B3 111 aa6.72□□□□□ -1.33
HNRNPC-232ENST00000557442 NUPR1O60356 82 aa6.72□□□□□ -1.33
HNRNPC-232ENST00000557442 LEPROTL1O95214 131 aa6.72□□□□□ -1.33
HNRNPC-232ENST00000557442 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
HNRNPC-232ENST00000557442 STPG4Q8N801 248 aa6.72□□□□□ -1.33
HNRNPC-232ENST00000557442 CHTOPQ9Y3Y2 248 aaKnown RBP6.72□□□□□ -1.33
HNRNPC-232ENST00000557442 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 FAT1Q14517 4588 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 C11orf86A6NJI1 115 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 H0Y8G0 127 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 PLA2G1BP04054 148 aaKnown RBP6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 CXCL5P42830 114 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 COX7B2Q8TF08 81 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 PLAC8Q9NZF1 115 aa6.71□□□□□ -1.34
HNRNPC-232ENST00000557442 F8VRH5 84 aa6.7□□□□□ -1.34
HNRNPC-232ENST00000557442 FABP4P15090 132 aa6.7□□□□□ -1.34
HNRNPC-232ENST00000557442 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
HNRNPC-232ENST00000557442 HSPB8Q9UJY1 196 aa6.7□□□□□ -1.34
HNRNPC-232ENST00000557442 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
HNRNPC-232ENST00000557442 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
HNRNPC-232ENST00000557442 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
HNRNPC-232ENST00000557442 IGLV5-39A0A0G2JS06 123 aa6.68□□□□□ -1.34
HNRNPC-232ENST00000557442 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
HNRNPC-232ENST00000557442 GAGE2EQ4V326 116 aa6.68□□□□□ -1.34
HNRNPC-232ENST00000557442 Q6ZRP5 223 aa6.68□□□□□ -1.34
HNRNPC-232ENST00000557442 GAGE2DQ9UEU5 116 aa6.68□□□□□ -1.34
HNRNPC-232ENST00000557442 VPS13BQ7Z7G8 4022 aa6.68□□□□□ -1.34
HNRNPC-232ENST00000557442 RPL37AP61513 92 aaKnown RBP6.67□□□□□ -1.34
HNRNPC-232ENST00000557442 ODF1Q14990 250 aa6.67□□□□□ -1.34
HNRNPC-232ENST00000557442 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
HNRNPC-232ENST00000557442 KRTAP4-12Q9BQ66 201 aa6.67□□□□□ -1.34
HNRNPC-232ENST00000557442 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
HNRNPC-232ENST00000557442 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
HNRNPC-232ENST00000557442 MAP1LC3CQ9BXW4 147 aa6.66□□□□□ -1.34
HNRNPC-232ENST00000557442 TMEM223A0PJW6 202 aa6.65□□□□□ -1.35
HNRNPC-232ENST00000557442 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.35
HNRNPC-232ENST00000557442 A0A1W2PNN7 141 aa6.64□□□□□ -1.35
HNRNPC-232ENST00000557442 FAM168BA1KXE4 195 aa6.64□□□□□ -1.35
HNRNPC-232ENST00000557442 PLNP26678 52 aa6.64□□□□□ -1.35
HNRNPC-232ENST00000557442 COA6Q5JTJ3 125 aaKnown RBP6.64□□□□□ -1.35
HNRNPC-232ENST00000557442 FAM19A5Q7Z5A7 132 aaPredicted RBP6.64□□□□□ -1.35
HNRNPC-232ENST00000557442 PMCHL2Q9BQD1 86 aa6.64□□□□□ -1.35
HNRNPC-232ENST00000557442 DPM2O94777 84 aa6.63□□□□□ -1.35
HNRNPC-232ENST00000557442 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
HNRNPC-232ENST00000557442 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
HNRNPC-232ENST00000557442 XAGE1AQ9HD64 81 aa6.63□□□□□ -1.35
HNRNPC-232ENST00000557442 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
HNRNPC-232ENST00000557442 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
HNRNPC-232ENST00000557442 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
HNRNPC-232ENST00000557442 IGKCP01834 107 aa6.61□□□□□ -1.35
HNRNPC-232ENST00000557442 PFN2P35080 140 aa6.61□□□□□ -1.35
HNRNPC-232ENST00000557442 PHF5AQ7RTV0 110 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-232ENST00000557442 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
HNRNPC-232ENST00000557442 ERG28Q9UKR5 140 aa6.61□□□□□ -1.35
HNRNPC-232ENST00000557442 M0QXV9 152 aa6.6□□□□□ -1.35
HNRNPC-232ENST00000557442 HERVK_113P61574 105 aa6.6□□□□□ -1.35
HNRNPC-232ENST00000557442 PRR3P79522 188 aaKnown RBP6.6□□□□□ -1.35
HNRNPC-232ENST00000557442 KRTAP7-1Q8IUC3 87 aa6.59□□□□□ -1.35
HNRNPC-232ENST00000557442 DMBT1Q9UGM3 2413 aaPredicted RBP6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 LEPROTO15243 131 aa6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 C3orf79P0CE67 100 aa6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 HNRNPA3P51991 378 aaKnown RBP6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 KRTDAPP60985 99 aa6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 COX17Q14061 63 aa6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms