RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 IGLV4-69A0A075B6H9 119 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 A0A0J9YWU9 116 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 CCL25O15444 150 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 FGF6P10767 208 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 FAM104AQ969W3 186 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 PMCHL2Q9BQD1 86 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 MRPL35Q9NZE8 188 aaKnown RBP4.05□□□□□ -1.76
FOXN3-215ENST00000557261 UQCR10Q9UDW1 63 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 ICOSQ9Y6W8 199 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 COL7A1Q02388 2944 aa4.05□□□□□ -1.76
FOXN3-215ENST00000557261 DYNC2H1Q8NCM8 4307 aaKnown RBP4.04□□□□□ -1.76
FOXN3-215ENST00000557261 TINCRA0A1B0GVN0 87 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 UBE2L6O14933 153 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 COX8AP10176 69 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 DDTP30046 118 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 HERVK_113P61574 105 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 LELP1Q5T871 98 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 OR5A1Q8NGJ0 315 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 TMEM101Q96IK0 257 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 CDC42SE2Q9NRR3 84 aa4.04□□□□□ -1.76
FOXN3-215ENST00000557261 RYR2Q92736 4967 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-215ENST00000557261 A0A096LPF7 62 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 TRAV10A0A0B4J240 114 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 IGKV2-29A2NJV5 120 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-215ENST00000557261 F5H768 121 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 DEFB4AO15263 64 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 UBE2D1P51668 147 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 HERVK_113P63121 156 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 Q6ZTC4 211 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 Q6ZUT4 128 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 CHAC1Q9BUX1 264 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 SACSQ9NZJ4 4579 aa4.03□□□□□ -1.76
FOXN3-215ENST00000557261 A6NDN8 102 aa4.02□□□□□ -1.77
FOXN3-215ENST00000557261 AMMECR1LQ6DCA0 310 aa4.02□□□□□ -1.77
FOXN3-215ENST00000557261 SLC25A34Q6PIV7 304 aa4.02□□□□□ -1.77
FOXN3-215ENST00000557261 MRAPQ8TCY5 172 aa4.02□□□□□ -1.77
FOXN3-215ENST00000557261 MRPS16Q9Y3D3 137 aaKnown RBP4.02□□□□□ -1.77
FOXN3-215ENST00000557261 DNAH7Q8WXX0 4024 aa4.01□□□□□ -1.77
FOXN3-215ENST00000557261 DEFB131BA0A096LNP1 70 aa4.01□□□□□ -1.77
FOXN3-215ENST00000557261 H3BRM9 83 aa4.01□□□□□ -1.77
FOXN3-215ENST00000557261 ZNF22P17026 224 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-215ENST00000557261 NMUP48645 174 aa4.01□□□□□ -1.77
FOXN3-215ENST00000557261 PRR3P79522 188 aaKnown RBP4.01□□□□□ -1.77
FOXN3-215ENST00000557261 RPL18AQ02543 176 aaKnown RBP4.01□□□□□ -1.77
FOXN3-215ENST00000557261 DEFB121Q5J5C9 76 aa4.01□□□□□ -1.77
FOXN3-215ENST00000557261 CASC10Q5T4H9 136 aa4.01□□□□□ -1.77
FOXN3-215ENST00000557261 HIGD1BQ9P298 99 aa4.01□□□□□ -1.77
FOXN3-215ENST00000557261 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 TRAV8-6A0A0B4J262 113 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 A0A0J9YY99 117 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 TMEM223A0PJW6 202 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 K7EP13 123 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 PFN2P35080 140 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 TCTAP57738 103 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 CTAG1AP78358 180 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 SFTA2Q6UW10 78 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 PLEKHB2Q96CS7 222 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 PRO1933Q9H354 126 aa4□□□□□ -1.77
FOXN3-215ENST00000557261 IGKV2D-26A0A0A0MRZ7 120 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 IGHV1-58A0A0C4DH39 117 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 A0A0J9YXV3 536 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 LEPROTO15243 131 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 PRB2P02812 416 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-215ENST00000557261 HTN3P15516 51 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 RBX1P62877 108 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 MPV17L2Q567V2 206 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 CEMP1Q6PRD7 247 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-215ENST00000557261 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 UPK3BQ9BT76 320 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 PRR34Q9NV39 138 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 DNAH1Q9P2D7 4330 aa3.99□□□□□ -1.77
FOXN3-215ENST00000557261 STAB2Q8WWQ8 2551 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 TRAV8-4A0A0B4J246 113 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 IGHV3OR16-9A0A0B4J2B5 98 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 MYMXA0A1B0GTQ4 84 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 LINC00587B1AMM8 73 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 M0R143 59 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 LINC01556Q5JQF7 62 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 C9orf129Q5T035 196 aaKnown RBP3.98□□□□□ -1.77
FOXN3-215ENST00000557261 ZFAND6Q6FIF0 208 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 C2orf91Q6ZV80 131 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 PCP2Q8IVA1 136 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 DEFB104AQ8WTQ1 72 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 C14orf144Q96I85 54 aa3.98□□□□□ -1.77
FOXN3-215ENST00000557261 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
FOXN3-215ENST00000557261 NUPR2A6NF83 97 aa3.97□□□□□ -1.77
FOXN3-215ENST00000557261 J3QQQ9 107 aa3.97□□□□□ -1.77
FOXN3-215ENST00000557261 LGALS3P17931 250 aaKnown RBP3.97□□□□□ -1.77
FOXN3-215ENST00000557261 HSD52Q0P140 79 aa3.97□□□□□ -1.77
FOXN3-215ENST00000557261 SS18Q15532 418 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms