RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 HIST3H2BBQ8N257 126 aa11.28□□□□□ -0.6
PSEN1-218ENST00000556864 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.61
PSEN1-218ENST00000556864 C20orf202A1L168 122 aa11.27□□□□□ -0.61
PSEN1-218ENST00000556864 IGKCP01834 107 aa11.27□□□□□ -0.61
PSEN1-218ENST00000556864 KRTDAPP60985 99 aa11.27□□□□□ -0.61
PSEN1-218ENST00000556864 SDIM1Q6ZPB5 146 aa11.27□□□□□ -0.61
PSEN1-218ENST00000556864 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
PSEN1-218ENST00000556864 HERVK_113P61574 105 aa11.26□□□□□ -0.61
PSEN1-218ENST00000556864 C2orf82Q6UX34 121 aa11.26□□□□□ -0.61
PSEN1-218ENST00000556864 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
PSEN1-218ENST00000556864 C3orf79P0CE67 100 aa11.25□□□□□ -0.61
PSEN1-218ENST00000556864 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
PSEN1-218ENST00000556864 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
PSEN1-218ENST00000556864 LINC00474Q9P2X8 69 aa11.25□□□□□ -0.61
PSEN1-218ENST00000556864 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
PSEN1-218ENST00000556864 RYR1P21817 5038 aa11.24□□□□□ -0.61
PSEN1-218ENST00000556864 AKR1D1P51857 326 aa11.24□□□□□ -0.61
PSEN1-218ENST00000556864 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
PSEN1-218ENST00000556864 LINC01545Q5VT33 79 aa11.24□□□□□ -0.61
PSEN1-218ENST00000556864 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
PSEN1-218ENST00000556864 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
PSEN1-218ENST00000556864 IGKV2-24A0A0C4DH68 120 aa11.22□□□□□ -0.61
PSEN1-218ENST00000556864 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
PSEN1-218ENST00000556864 KIAA1109Q2LD37 5005 aa11.21□□□□□ -0.61
PSEN1-218ENST00000556864 APOBP04114 4563 aaKnown RBP11.21□□□□□ -0.61
PSEN1-218ENST00000556864 A0A096LNI7 61 aa11.21□□□□□ -0.61
PSEN1-218ENST00000556864 TLX1NBP0CAT3 122 aa11.21□□□□□ -0.61
PSEN1-218ENST00000556864 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.61
PSEN1-218ENST00000556864 CIRBPQ14011 172 aaKnown RBP11.21□□□□□ -0.61
PSEN1-218ENST00000556864 SPACA4Q8TDM5 124 aa11.21□□□□□ -0.61
PSEN1-218ENST00000556864 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-218ENST00000556864 CHTF8P0CG12 524 aa11.2□□□□□ -0.62
PSEN1-218ENST00000556864 PTTG1IPP53801 180 aa11.2□□□□□ -0.62
PSEN1-218ENST00000556864 SCXQ7RTU7 201 aa11.2□□□□□ -0.62
PSEN1-218ENST00000556864 C5orf52A6NGY3 159 aa11.19□□□□□ -0.62
PSEN1-218ENST00000556864 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
PSEN1-218ENST00000556864 GAGE2BQ13066 116 aa11.19□□□□□ -0.62
PSEN1-218ENST00000556864 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
PSEN1-218ENST00000556864 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
PSEN1-218ENST00000556864 XGP55808 180 aa11.18□□□□□ -0.62
PSEN1-218ENST00000556864 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
PSEN1-218ENST00000556864 DNAH8Q96JB1 4490 aa11.18□□□□□ -0.62
PSEN1-218ENST00000556864 LEPROTO15243 131 aa11.17□□□□□ -0.62
PSEN1-218ENST00000556864 HAMPP81172 84 aa11.17□□□□□ -0.62
PSEN1-218ENST00000556864 PANO1I0J062 215 aa11.16□□□□□ -0.62
PSEN1-218ENST00000556864 CIRBP-AS1Q8TBR5 109 aa11.16□□□□□ -0.62
PSEN1-218ENST00000556864 HERC2O95714 4834 aa11.16□□□□□ -0.62
PSEN1-218ENST00000556864 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
PSEN1-218ENST00000556864 C9orf116Q5BN46 136 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-218ENST00000556864 Q6ZRP5 223 aa11.15□□□□□ -0.62
PSEN1-218ENST00000556864 ZNF625Q96I27 306 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-218ENST00000556864 HERV-K104P63124 156 aa11.14□□□□□ -0.63
PSEN1-218ENST00000556864 STPG4Q8N801 248 aa11.14□□□□□ -0.63
PSEN1-218ENST00000556864 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
PSEN1-218ENST00000556864 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
PSEN1-218ENST00000556864 A0A087WYN8 130 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 MYMXA0A1B0GTQ4 84 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 E9PLD3 99 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 J3QQQ9 107 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 NMUP48645 174 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 GAGE2EQ4V326 116 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 PLAC8Q9NZF1 115 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 GAGE2DQ9UEU5 116 aa11.13□□□□□ -0.63
PSEN1-218ENST00000556864 TMA7Q9Y2S6 64 aaKnown RBP11.13□□□□□ -0.63
PSEN1-218ENST00000556864 TSPEAR-AS2P59090 65 aa11.11□□□□□ -0.63
PSEN1-218ENST00000556864 COX17Q14061 63 aa11.11□□□□□ -0.63
PSEN1-218ENST00000556864 LINC00587B1AMM8 73 aa11.1□□□□□ -0.63
PSEN1-218ENST00000556864 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
PSEN1-218ENST00000556864 PFN2P35080 140 aa11.09□□□□□ -0.63
PSEN1-218ENST00000556864 ATOH7Q8N100 152 aa11.08□□□□□ -0.64
PSEN1-218ENST00000556864 HSPG2P98160 4391 aa11.07□□□□□ -0.64
PSEN1-218ENST00000556864 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
PSEN1-218ENST00000556864 Q8N1X5 172 aa11.07□□□□□ -0.64
PSEN1-218ENST00000556864 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
PSEN1-218ENST00000556864 HSBP1L1C9JCN9 74 aa11.06□□□□□ -0.64
PSEN1-218ENST00000556864 FAM229AH3BQW9 127 aa11.06□□□□□ -0.64
PSEN1-218ENST00000556864 LINC00158P58513 81 aa11.06□□□□□ -0.64
PSEN1-218ENST00000556864 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
PSEN1-218ENST00000556864 SCGB1D1O95968 90 aa11.05□□□□□ -0.64
PSEN1-218ENST00000556864 SMR3BP02814 79 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-218ENST00000556864 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
PSEN1-218ENST00000556864 FAM19A5Q7Z5A7 132 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-218ENST00000556864 A0A1W2PNN7 141 aa11.03□□□□□ -0.64
PSEN1-218ENST00000556864 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
PSEN1-218ENST00000556864 Q5VSD8 79 aa11.03□□□□□ -0.64
PSEN1-218ENST00000556864 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
PSEN1-218ENST00000556864 M0QXV9 152 aa11.02□□□□□ -0.65
PSEN1-218ENST00000556864 PLA2G1BP04054 148 aaKnown RBP11.02□□□□□ -0.65
PSEN1-218ENST00000556864 SMIM13P0DJ93 91 aa11.02□□□□□ -0.65
PSEN1-218ENST00000556864 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
PSEN1-218ENST00000556864 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
PSEN1-218ENST00000556864 IGKV2D-26A0A0A0MRZ7 120 aa11.01□□□□□ -0.65
PSEN1-218ENST00000556864 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
PSEN1-218ENST00000556864 FAM168BA1KXE4 195 aa11.01□□□□□ -0.65
PSEN1-218ENST00000556864 PLA2G2DQ9UNK4 145 aa11□□□□□ -0.65
PSEN1-218ENST00000556864 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
PSEN1-218ENST00000556864 RPL37AP61513 92 aaKnown RBP10.99□□□□□ -0.65
PSEN1-218ENST00000556864 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
PSEN1-218ENST00000556864 SERTAD4-AS1Q5TG53 156 aa10.98□□□□□ -0.65
PSEN1-218ENST00000556864 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms