RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 C12orf57Q99622 126 aa6.61□□□□□ -1.35
SHMT2-224ENST00000556737 VAMP8Q9BV40 100 aa6.61□□□□□ -1.35
SHMT2-224ENST00000556737 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
SHMT2-224ENST00000556737 LINC00959A0A1B0GUT2 108 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 C11orf86A6NJI1 115 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 XCL1P47992 114 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 UBE2D1P51668 147 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 HERVK_113P61574 105 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 SEC11AP67812 179 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 LINC00469Q8N7U9 141 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
SHMT2-224ENST00000556737 IGLV4-69A0A075B6H9 119 aa6.59□□□□□ -1.35
SHMT2-224ENST00000556737 IGHV3-64A0A075B6Q5 118 aa6.59□□□□□ -1.35
SHMT2-224ENST00000556737 TINCRA0A1B0GVN0 87 aa6.59□□□□□ -1.35
SHMT2-224ENST00000556737 CCL25O15444 150 aa6.59□□□□□ -1.35
SHMT2-224ENST00000556737 IGLC3P0DOY3 106 aa6.59□□□□□ -1.35
SHMT2-224ENST00000556737 HERVK_113P63121 156 aa6.59□□□□□ -1.35
SHMT2-224ENST00000556737 HIGD2BQ4VC39 106 aa6.59□□□□□ -1.35
SHMT2-224ENST00000556737 H3BRM9 83 aa6.58□□□□□ -1.36
SHMT2-224ENST00000556737 CHTF8P0CG12 524 aa6.58□□□□□ -1.36
SHMT2-224ENST00000556737 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
SHMT2-224ENST00000556737 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
SHMT2-224ENST00000556737 STPG4Q8N801 248 aa6.58□□□□□ -1.36
SHMT2-224ENST00000556737 SPACA4Q8TDM5 124 aa6.58□□□□□ -1.36
SHMT2-224ENST00000556737 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
SHMT2-224ENST00000556737 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
SHMT2-224ENST00000556737 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
SHMT2-224ENST00000556737 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
SHMT2-224ENST00000556737 LINC00518Q8N0U6 118 aa6.57□□□□□ -1.36
SHMT2-224ENST00000556737 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
SHMT2-224ENST00000556737 SPINK8P0C7L1 97 aa6.56□□□□□ -1.36
SHMT2-224ENST00000556737 NMUP48645 174 aa6.56□□□□□ -1.36
SHMT2-224ENST00000556737 HNRNPA3P51991 378 aaKnown RBP6.56□□□□□ -1.36
SHMT2-224ENST00000556737 COX6A2Q02221 97 aa6.56□□□□□ -1.36
SHMT2-224ENST00000556737 CD164L2Q6UWJ8 174 aa6.56□□□□□ -1.36
SHMT2-224ENST00000556737 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
SHMT2-224ENST00000556737 IGHV1-58A0A0C4DH39 117 aa6.55□□□□□ -1.36
SHMT2-224ENST00000556737 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
SHMT2-224ENST00000556737 MALP21145 153 aa6.55□□□□□ -1.36
SHMT2-224ENST00000556737 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
SHMT2-224ENST00000556737 C5orf38Q86SI9 138 aa6.55□□□□□ -1.36
SHMT2-224ENST00000556737 A0A087WYN8 130 aa6.54□□□□□ -1.36
SHMT2-224ENST00000556737 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
SHMT2-224ENST00000556737 FAM19A3Q7Z5A8 133 aa6.54□□□□□ -1.36
SHMT2-224ENST00000556737 LINC00526Q96FQ7 95 aa6.54□□□□□ -1.36
SHMT2-224ENST00000556737 PRO1933Q9H354 126 aa6.54□□□□□ -1.36
SHMT2-224ENST00000556737 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
SHMT2-224ENST00000556737 A0A096LNI7 61 aa6.53□□□□□ -1.36
SHMT2-224ENST00000556737 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
SHMT2-224ENST00000556737 COX7A2LO14548 114 aa6.53□□□□□ -1.36
SHMT2-224ENST00000556737 LGALS3P17931 250 aaKnown RBP6.53□□□□□ -1.36
SHMT2-224ENST00000556737 TOMM7Q9P0U1 55 aa6.53□□□□□ -1.36
SHMT2-224ENST00000556737 E9PLD3 99 aa6.52□□□□□ -1.37
SHMT2-224ENST00000556737 TSTD3H0UI37 97 aa6.52□□□□□ -1.37
SHMT2-224ENST00000556737 PLEKHB2Q96CS7 222 aa6.52□□□□□ -1.37
SHMT2-224ENST00000556737 C14orf144Q96I85 54 aa6.52□□□□□ -1.37
SHMT2-224ENST00000556737 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
SHMT2-224ENST00000556737 IGLV5-45A0A087WSX0 123 aa6.51□□□□□ -1.37
SHMT2-224ENST00000556737 IGHV3OR16-9A0A0B4J2B5 98 aa6.51□□□□□ -1.37
SHMT2-224ENST00000556737 IGKV2-24A0A0C4DH68 120 aa6.51□□□□□ -1.37
SHMT2-224ENST00000556737 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
SHMT2-224ENST00000556737 LEPROTO15243 131 aa6.51□□□□□ -1.37
SHMT2-224ENST00000556737 APOMO95445 188 aa6.51□□□□□ -1.37
SHMT2-224ENST00000556737 PRSS2P07478 247 aa6.51□□□□□ -1.37
SHMT2-224ENST00000556737 A0A087WZ39 114 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 IGKV2D-26A0A0A0MRZ7 120 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 SMIM1B2RUZ4 78 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 J3QL48 77 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 J3QQQ9 107 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 SYCNQ0VAF6 134 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 ORAOV1Q8WV07 137 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 TNXBP22105 4242 aa6.5□□□□□ -1.37
SHMT2-224ENST00000556737 PCP4L1A6NKN8 68 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 ZNF815PA8K554 130 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 SPAG11BQ08648 103 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 SLC25A34Q6PIV7 304 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 Q6ZRU5 148 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 PCP2Q8IVA1 136 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 COX7B2Q8TF08 81 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 TTTY13Q9BZ97 58 aa6.49□□□□□ -1.37
SHMT2-224ENST00000556737 OXTP01178 125 aa6.48□□□□□ -1.37
SHMT2-224ENST00000556737 COX8AP10176 69 aa6.48□□□□□ -1.37
SHMT2-224ENST00000556737 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
SHMT2-224ENST00000556737 C6orf226Q5I0X4 101 aa6.48□□□□□ -1.37
SHMT2-224ENST00000556737 SCGB1D4Q6XE38 83 aa6.48□□□□□ -1.37
SHMT2-224ENST00000556737 LINC01561Q8N1V8 128 aa6.48□□□□□ -1.37
SHMT2-224ENST00000556737 UQCR10Q9UDW1 63 aa6.48□□□□□ -1.37
SHMT2-224ENST00000556737 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 MYMXA0A1B0GTQ4 84 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 PTTG1IPP53801 180 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 CKS1BP61024 79 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 C2orf48Q96LS8 159 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 CAMK2N2Q96S95 79 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 TP73-AS1Q9UF72 201 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 PKIGQ9Y2B9 76 aa6.47□□□□□ -1.37
SHMT2-224ENST00000556737 LOC107984640A0A0U1RRK4 108 aa6.46□□□□□ -1.38
SHMT2-224ENST00000556737 DPH3Q96FX2 82 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms