RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 PTTG1IPP53801 180 aa10.82□□□□□ -0.68
PSEN1-217ENST00000556533 FAM19A2Q8N3H0 131 aa10.82□□□□□ -0.68
PSEN1-217ENST00000556533 PLAC8Q9NZF1 115 aa10.82□□□□□ -0.68
PSEN1-217ENST00000556533 C6orf48Q9UBA6 75 aa10.82□□□□□ -0.68
PSEN1-217ENST00000556533 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
PSEN1-217ENST00000556533 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
PSEN1-217ENST00000556533 Q8IZM0 81 aa10.8□□□□□ -0.68
PSEN1-217ENST00000556533 H3BRM9 83 aa10.79□□□□□ -0.68
PSEN1-217ENST00000556533 SERF1AO75920 110 aa10.79□□□□□ -0.68
PSEN1-217ENST00000556533 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
PSEN1-217ENST00000556533 IGLV5-45A0A087WSX0 123 aa10.78□□□□□ -0.68
PSEN1-217ENST00000556533 SMIM1B2RUZ4 78 aa10.78□□□□□ -0.68
PSEN1-217ENST00000556533 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
PSEN1-217ENST00000556533 GAGE2EQ4V326 116 aa10.78□□□□□ -0.68
PSEN1-217ENST00000556533 C9orf116Q5BN46 136 aaPredicted RBP10.78□□□□□ -0.68
PSEN1-217ENST00000556533 GAGE2DQ9UEU5 116 aa10.78□□□□□ -0.68
PSEN1-217ENST00000556533 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
PSEN1-217ENST00000556533 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
PSEN1-217ENST00000556533 C7orf33Q8WU49 177 aa10.77□□□□□ -0.69
PSEN1-217ENST00000556533 CHTOPQ9Y3Y2 248 aaKnown RBP10.77□□□□□ -0.69
PSEN1-217ENST00000556533 LINC00310P59036 64 aa10.76□□□□□ -0.69
PSEN1-217ENST00000556533 Q6ZRP5 223 aa10.76□□□□□ -0.69
PSEN1-217ENST00000556533 NUPR1O60356 82 aa10.75□□□□□ -0.69
PSEN1-217ENST00000556533 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
PSEN1-217ENST00000556533 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
PSEN1-217ENST00000556533 C11orf86A6NJI1 115 aa10.74□□□□□ -0.69
PSEN1-217ENST00000556533 F8VRH5 84 aa10.74□□□□□ -0.69
PSEN1-217ENST00000556533 H0Y8G0 127 aa10.74□□□□□ -0.69
PSEN1-217ENST00000556533 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
PSEN1-217ENST00000556533 ZNF22P17026 224 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-217ENST00000556533 LEPROTL1O95214 131 aa10.73□□□□□ -0.69
PSEN1-217ENST00000556533 FABP4P15090 132 aa10.73□□□□□ -0.69
PSEN1-217ENST00000556533 KRTAP10-4P60372 401 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-217ENST00000556533 NDUFC2-KCTD14E9PQ53 114 aa10.72□□□□□ -0.69
PSEN1-217ENST00000556533 CXCL5P42830 114 aa10.72□□□□□ -0.69
PSEN1-217ENST00000556533 TRAV12-1A0A0B4J245 112 aa10.71□□□□□ -0.69
PSEN1-217ENST00000556533 FAM168BA1KXE4 195 aa10.71□□□□□ -0.69
PSEN1-217ENST00000556533 HIST1H2BKO60814 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BJP06899 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BOP23527 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BBP33778 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BDP58876 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BCP62807 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST2H2BEQ16778 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BHQ93079 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BNQ99877 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HIST1H2BMQ99879 126 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
PSEN1-217ENST00000556533 IGLV5-39A0A0G2JS06 123 aa10.69□□□□□ -0.7
PSEN1-217ENST00000556533 FAM19A5Q7Z5A7 132 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-217ENST00000556533 PHF5AQ7RTV0 110 aaKnown RBP10.68□□□□□ -0.7
PSEN1-217ENST00000556533 C9orf129Q5T035 196 aaKnown RBP10.67□□□□□ -0.7
PSEN1-217ENST00000556533 XAGE1AQ9HD64 81 aa10.67□□□□□ -0.7
PSEN1-217ENST00000556533 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
PSEN1-217ENST00000556533 ODF1Q14990 250 aa10.65□□□□□ -0.7
PSEN1-217ENST00000556533 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
PSEN1-217ENST00000556533 PFN2P35080 140 aa10.64□□□□□ -0.71
PSEN1-217ENST00000556533 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
PSEN1-217ENST00000556533 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-217ENST00000556533 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
PSEN1-217ENST00000556533 MAP1LC3CQ9BXW4 147 aa10.63□□□□□ -0.71
PSEN1-217ENST00000556533 KRTAP7-1Q8IUC3 87 aa10.62□□□□□ -0.71
PSEN1-217ENST00000556533 M0QXV9 152 aa10.61□□□□□ -0.71
PSEN1-217ENST00000556533 FLG2Q5D862 2391 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-217ENST00000556533 PLNP26678 52 aa10.6□□□□□ -0.71
PSEN1-217ENST00000556533 SERTAD4-AS1Q5TG53 156 aa10.6□□□□□ -0.71
PSEN1-217ENST00000556533 DPM2O94777 84 aa10.59□□□□□ -0.71
PSEN1-217ENST00000556533 UBE2BP63146 152 aa10.59□□□□□ -0.71
PSEN1-217ENST00000556533 PSORS1C2Q9UIG4 136 aa10.59□□□□□ -0.71
PSEN1-217ENST00000556533 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
PSEN1-217ENST00000556533 MYCBP2O75592 4640 aa10.58□□□□□ -0.72
PSEN1-217ENST00000556533 J3QL48 77 aa10.58□□□□□ -0.72
PSEN1-217ENST00000556533 IGKCP01834 107 aa10.57□□□□□ -0.72
PSEN1-217ENST00000556533 C1orf137Q5JT78 98 aa10.57□□□□□ -0.72
PSEN1-217ENST00000556533 SFTA2Q6UW10 78 aa10.57□□□□□ -0.72
PSEN1-217ENST00000556533 C22orf24Q9Y442 160 aa10.57□□□□□ -0.72
PSEN1-217ENST00000556533 LINC00158P58513 81 aa10.56□□□□□ -0.72
PSEN1-217ENST00000556533 KRTAP11-1Q8IUC1 163 aa10.56□□□□□ -0.72
PSEN1-217ENST00000556533 PKHD1L1Q86WI1 4243 aa10.55□□□□□ -0.72
PSEN1-217ENST00000556533 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
PSEN1-217ENST00000556533 SYS1-DBNDD2H3BUS1 97 aa10.55□□□□□ -0.72
PSEN1-217ENST00000556533 HERVK_113P61574 105 aa10.54□□□□□ -0.72
PSEN1-217ENST00000556533 COX17Q14061 63 aa10.54□□□□□ -0.72
PSEN1-217ENST00000556533 LBHQ53QV2 105 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-217ENST00000556533 COA6Q5JTJ3 125 aaKnown RBP10.54□□□□□ -0.72
PSEN1-217ENST00000556533 KRTAP29-1A8MX34 341 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-217ENST00000556533 LEPROTO15243 131 aa10.53□□□□□ -0.72
PSEN1-217ENST00000556533 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
PSEN1-217ENST00000556533 SND1-IT1Q9HBX3 110 aa10.53□□□□□ -0.72
PSEN1-217ENST00000556533 NDUFA12Q9UI09 145 aa10.53□□□□□ -0.72
PSEN1-217ENST00000556533 OXTP01178 125 aa10.52□□□□□ -0.73
PSEN1-217ENST00000556533 MEIG1Q5JSS6 88 aa10.52□□□□□ -0.73
PSEN1-217ENST00000556533 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
PSEN1-217ENST00000556533 GAGE10A6NGK3 116 aa10.51□□□□□ -0.73
PSEN1-217ENST00000556533 SMIM13P0DJ93 91 aa10.51□□□□□ -0.73
PSEN1-217ENST00000556533 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
PSEN1-217ENST00000556533 KRTDAPP60985 99 aa10.51□□□□□ -0.73
PSEN1-217ENST00000556533 SPINK6Q6UWN8 80 aa10.51□□□□□ -0.73
PSEN1-217ENST00000556533 PET117Q6UWS5 81 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms