RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 HCP5Q6MZN7 132 aa1.62□□□□□ -2.15
MTHFD1-212ENST00000555858 LYPD1Q8N2G4 141 aa1.62□□□□□ -2.15
MTHFD1-212ENST00000555858 TTTY12Q9BZ98 90 aa1.62□□□□□ -2.15
MTHFD1-212ENST00000555858 MRPL36Q9P0J6 103 aaKnown RBP1.62□□□□□ -2.15
MTHFD1-212ENST00000555858 ZNF831Q5JPB2 1677 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 TRAV21A0A0B4J279 112 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 H0YGX0 51 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 M0R1W7 72 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 UQCR11O14957 56 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 IL9P15248 144 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 CCL3L1P16619 93 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 DEFB134Q4QY38 66 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 FDCSPQ8NFU4 85 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 C4orf3Q8WVX3 66 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 HIGD2AQ9BW72 106 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 KLK9Q9UKQ9 250 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 LCTP09848 1927 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 MED13Q9UHV7 2174 aa1.61□□□□□ -2.15
MTHFD1-212ENST00000555858 SHANK1Q9Y566 2161 aa1.6□□□□□ -2.15
MTHFD1-212ENST00000555858 IGKV3-7A0A075B6H7 116 aa1.6□□□□□ -2.15
MTHFD1-212ENST00000555858 LOC110117498A0A087WWA1 95 aa1.6□□□□□ -2.15
MTHFD1-212ENST00000555858 KRTAP13-3Q3SY46 172 aa1.6□□□□□ -2.15
MTHFD1-212ENST00000555858 LINC00322Q6ZN03 302 aaPredicted RBP1.6□□□□□ -2.15
MTHFD1-212ENST00000555858 CNFNQ9BYD5 112 aa1.6□□□□□ -2.15
MTHFD1-212ENST00000555858 TIMM8BQ9Y5J9 83 aaPredicted RBP1.6□□□□□ -2.15
MTHFD1-212ENST00000555858 SSC5DA1L4H1 1573 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 MYO7AQ13402 2215 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 PLXNB2O15031 1838 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 IGKV2-24A0A0C4DH68 120 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 NDUFA3O95167 84 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 COX17Q14061 63 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 SPATA8Q6RVD6 105 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 WFDC9Q8NEX5 89 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 ZNF625Q96I27 306 aaPredicted RBP1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 SPRR4Q96PI1 79 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 WFDC10AQ9H1F0 79 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 MINOS1-NBL1R4GNA1 71 aa1.59□□□□□ -2.15
MTHFD1-212ENST00000555858 PRR14LQ5THK1 2151 aa1.59□□□□□ -2.16
MTHFD1-212ENST00000555858 INTS1Q8N201 2190 aaKnown RBP1.59□□□□□ -2.16
MTHFD1-212ENST00000555858 SHROOM3Q8TF72 1996 aa1.59□□□□□ -2.16
MTHFD1-212ENST00000555858 TNRC6BQ9UPQ9 1833 aaKnown RBP1.59□□□□□ -2.16
MTHFD1-212ENST00000555858 NCOA6Q14686 2063 aaPredicted RBP1.59□□□□□ -2.16
MTHFD1-212ENST00000555858 MYOFQ9NZM1 2061 aa1.59□□□□□ -2.16
MTHFD1-212ENST00000555858 HEATR1Q9H583 2144 aaKnown RBP1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 PCDH15Q96QU1 1955 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 SCN3AQ9NY46 2000 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 IGLV6-57P01721 117 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 ZNF137PP52743 207 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 RPS27LQ71UM5 84 aaKnown RBP1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 DEFB132Q7Z7B7 95 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 LINC00304Q8N9R0 145 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 KCNQ1DNQ9H478 68 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 PSORS1C2Q9UIG4 136 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 PLXNB1O43157 2135 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 MYO7BQ6PIF6 2116 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 EML5Q05BV3 1969 aa1.58□□□□□ -2.16
MTHFD1-212ENST00000555858 TRGV4A0A0C4DH28 118 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 A0A1W2PNN7 141 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 NDUFA4O00483 81 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 TFF3Q07654 80 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 LINC01590Q5TEZ4 76 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 C9orf163Q8N9P6 203 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 PATE1Q8WXA2 126 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 GAFA1Q96PS6 74 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 SMIM2Q9BVW6 85 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 TNRC6CQ9HCJ0 1690 aaKnown RBP1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 CACNA1DQ01668 2161 aa1.57□□□□□ -2.16
MTHFD1-212ENST00000555858 MPDZO75970 2070 aa1.56□□□□□ -2.16
MTHFD1-212ENST00000555858 IGKV3OR2-268A0A0C4DH90 116 aa1.56□□□□□ -2.16
MTHFD1-212ENST00000555858 ETDCA0A1B0GVM5 59 aa1.56□□□□□ -2.16
MTHFD1-212ENST00000555858 CPSF4LA6NMK7 179 aaKnown RBP1.56□□□□□ -2.16
MTHFD1-212ENST00000555858 SPINK7P58062 85 aa1.56□□□□□ -2.16
MTHFD1-212ENST00000555858 ARHGAP5-AS1Q96IT6 56 aa1.56□□□□□ -2.16
MTHFD1-212ENST00000555858 KIAA0100Q14667 2235 aaKnown RBP1.55□□□□□ -2.16
MTHFD1-212ENST00000555858 TRGV2A0A075B6R0 118 aa1.55□□□□□ -2.16
MTHFD1-212ENST00000555858 IAPPP10997 89 aa1.55□□□□□ -2.16
MTHFD1-212ENST00000555858 DEFB112Q30KQ8 113 aa1.55□□□□□ -2.16
MTHFD1-212ENST00000555858 COA5Q86WW8 74 aa1.55□□□□□ -2.16
MTHFD1-212ENST00000555858 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
MTHFD1-212ENST00000555858 SPTBP11277 2137 aa1.55□□□□□ -2.16
MTHFD1-212ENST00000555858 TET1Q8NFU7 2136 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 ZNF407Q9C0G0 2248 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 IGKV2-40A0A087WW87 121 aaPredicted RBP1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 TRBV6-4A0A1B0GX49 114 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 MRPL33O75394 65 aaKnown RBP1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 IGKV2D-40P01614 121 aaPredicted RBP1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 IGLV3-1P01715 115 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 IGKV4-1P06312 121 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 FXYD4P59646 89 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 HAMPP81172 84 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 Q6ZTI0 123 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 FREM3P0C091 2139 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 PI4KAP42356 2102 aa1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 PRRC2BQ5JSZ5 2229 aaKnown RBP1.54□□□□□ -2.16
MTHFD1-212ENST00000555858 A0A087WTM6 91 aa1.53□□□□□ -2.16
MTHFD1-212ENST00000555858 NDUFA1O15239 70 aa1.53□□□□□ -2.16
MTHFD1-212ENST00000555858 ZFHX3Q15911 3703 aa1.53□□□□□ -2.17
MTHFD1-212ENST00000555858 KMT2BQ9UMN6 2715 aaPredicted RBP1.53□□□□□ -2.17
MTHFD1-212ENST00000555858 SDK2Q58EX2 2172 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms