RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
SHMT2-220ENST00000555634 LYSTQ99698 3801 aa7.38□□□□□ -1.23
SHMT2-220ENST00000555634 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.38□□□□□ -1.23
SHMT2-220ENST00000555634 A0A087WTM6 91 aa7.38□□□□□ -1.23
SHMT2-220ENST00000555634 TMEM238C9JI98 176 aa7.38□□□□□ -1.23
SHMT2-220ENST00000555634 SLC25A34Q6PIV7 304 aa7.38□□□□□ -1.23
SHMT2-220ENST00000555634 MAPKAPK5-AS1Q8N8E1 139 aa7.38□□□□□ -1.23
SHMT2-220ENST00000555634 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
SHMT2-220ENST00000555634 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
SHMT2-220ENST00000555634 IGKV2D-26A0A0A0MRZ7 120 aa7.37□□□□□ -1.23
SHMT2-220ENST00000555634 COX8AP10176 69 aa7.37□□□□□ -1.23
SHMT2-220ENST00000555634 LRCOL1A6NCL2 159 aa7.36□□□□□ -1.23
SHMT2-220ENST00000555634 TSPEAR-AS2P59090 65 aa7.36□□□□□ -1.23
SHMT2-220ENST00000555634 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
SHMT2-220ENST00000555634 COX17Q14061 63 aa7.36□□□□□ -1.23
SHMT2-220ENST00000555634 C2orf82Q6UX34 121 aa7.36□□□□□ -1.23
SHMT2-220ENST00000555634 MIEN1Q9BRT3 115 aa7.36□□□□□ -1.23
SHMT2-220ENST00000555634 UQCR10Q9UDW1 63 aa7.36□□□□□ -1.23
SHMT2-220ENST00000555634 RYR2Q92736 4967 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 IGLV5-52A0A0A0MRZ9 124 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 RTL8CO15255 209 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 DLEU1O43261 78 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 LINC00526Q96FQ7 95 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
SHMT2-220ENST00000555634 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
SHMT2-220ENST00000555634 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 LINC00158P58513 81 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 TNP2Q05952 138 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 Q6ZRU5 148 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 BOD1L2Q8IYS8 172 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 LINC00518Q8N0U6 118 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 C14orf144Q96I85 54 aa7.34□□□□□ -1.23
SHMT2-220ENST00000555634 RYR1P21817 5038 aa7.33□□□□□ -1.24
SHMT2-220ENST00000555634 A0A0J9YXY3 114 aa7.33□□□□□ -1.24
SHMT2-220ENST00000555634 LOC107984640A0A0U1RRK4 108 aa7.33□□□□□ -1.24
SHMT2-220ENST00000555634 TIMM17BO60830 172 aa7.33□□□□□ -1.24
SHMT2-220ENST00000555634 PFN2P35080 140 aa7.33□□□□□ -1.24
SHMT2-220ENST00000555634 RPL18AQ02543 176 aaKnown RBP7.33□□□□□ -1.24
SHMT2-220ENST00000555634 WFDC2Q14508 124 aa7.33□□□□□ -1.24
SHMT2-220ENST00000555634 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
SHMT2-220ENST00000555634 HNRNPA3P51991 378 aaKnown RBP7.32□□□□□ -1.24
SHMT2-220ENST00000555634 NDUFC2-KCTD14E9PQ53 114 aa7.31□□□□□ -1.24
SHMT2-220ENST00000555634 SRSF9Q13242 221 aaKnown RBP eCLIP7.31□□□□□ -1.24
SHMT2-220ENST00000555634 Q6ZVH6 145 aa7.31□□□□□ -1.24
SHMT2-220ENST00000555634 TTTY13Q9BZ97 58 aa7.31□□□□□ -1.24
SHMT2-220ENST00000555634 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
SHMT2-220ENST00000555634 LINC00474Q9P2X8 69 aa7.31□□□□□ -1.24
SHMT2-220ENST00000555634 C6orf48Q9UBA6 75 aa7.31□□□□□ -1.24
SHMT2-220ENST00000555634 PRO1933Q9H354 126 aa7.3□□□□□ -1.24
SHMT2-220ENST00000555634 HIGD1BQ9P298 99 aa7.3□□□□□ -1.24
SHMT2-220ENST00000555634 VPS13DQ5THJ4 4388 aa7.29□□□□□ -1.24
SHMT2-220ENST00000555634 DNAH1Q9P2D7 4330 aa7.29□□□□□ -1.24
SHMT2-220ENST00000555634 A0A0U1RRA0 63 aa7.29□□□□□ -1.24
SHMT2-220ENST00000555634 SMIM13P0DJ93 91 aa7.29□□□□□ -1.24
SHMT2-220ENST00000555634 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
SHMT2-220ENST00000555634 HIST1H4GQ99525 98 aa7.29□□□□□ -1.24
SHMT2-220ENST00000555634 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
SHMT2-220ENST00000555634 C9orf163Q8N9P6 203 aa7.28□□□□□ -1.24
SHMT2-220ENST00000555634 SPANXDQ9BXN6 97 aa7.28□□□□□ -1.24
SHMT2-220ENST00000555634 SPANXB1Q9NS25 103 aaPredicted RBP7.28□□□□□ -1.24
SHMT2-220ENST00000555634 SPANXCQ9NY87 97 aa7.28□□□□□ -1.24
SHMT2-220ENST00000555634 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 A6NJY4 79 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 IFITM1P13164 125 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
SHMT2-220ENST00000555634 GAGE2BQ13066 116 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 TAL2Q16559 108 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 C9orf116Q5BN46 136 aaPredicted RBP7.27□□□□□ -1.25
SHMT2-220ENST00000555634 MIR7-3HGQ8N6C7 128 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
SHMT2-220ENST00000555634 C16orf90A8MZG2 172 aa7.26□□□□□ -1.25
SHMT2-220ENST00000555634 M0R143 59 aa7.26□□□□□ -1.25
SHMT2-220ENST00000555634 HSD52Q0P140 79 aa7.26□□□□□ -1.25
SHMT2-220ENST00000555634 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
SHMT2-220ENST00000555634 IGKV2-24A0A0C4DH68 120 aa7.25□□□□□ -1.25
SHMT2-220ENST00000555634 SLPIP03973 132 aa7.25□□□□□ -1.25
SHMT2-220ENST00000555634 DPH3Q96FX2 82 aa7.25□□□□□ -1.25
SHMT2-220ENST00000555634 PTTG1IPP53801 180 aa7.24□□□□□ -1.25
SHMT2-220ENST00000555634 DAND5Q8N907 189 aa7.24□□□□□ -1.25
SHMT2-220ENST00000555634 NKAPP1Q8N9T2 125 aa7.24□□□□□ -1.25
SHMT2-220ENST00000555634 SND1-IT1Q9HBX3 110 aa7.24□□□□□ -1.25
SHMT2-220ENST00000555634 TP73-AS1Q9UF72 201 aa7.24□□□□□ -1.25
SHMT2-220ENST00000555634 DDTP30046 118 aa7.23□□□□□ -1.25
SHMT2-220ENST00000555634 NPC2P61916 151 aa7.23□□□□□ -1.25
SHMT2-220ENST00000555634 Q6ZRP5 223 aa7.23□□□□□ -1.25
SHMT2-220ENST00000555634 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
SHMT2-220ENST00000555634 DNAH6Q9C0G6 4158 aa7.23□□□□□ -1.25
SHMT2-220ENST00000555634 A0A096LNI7 61 aa7.22□□□□□ -1.25
SHMT2-220ENST00000555634 C2orf91Q6ZV80 131 aa7.22□□□□□ -1.25
SHMT2-220ENST00000555634 LINC00308Q8TCZ7 52 aa7.22□□□□□ -1.25
SHMT2-220ENST00000555634 LITAFQ99732 161 aa7.22□□□□□ -1.25
SHMT2-220ENST00000555634 XAGE1AQ9HD64 81 aa7.22□□□□□ -1.25
SHMT2-220ENST00000555634 KRTAP10-2P60368 255 aa7.21□□□□□ -1.26
SHMT2-220ENST00000555634 ADAMTSL4-AS1Q5T5F5 129 aa7.21□□□□□ -1.26
SHMT2-220ENST00000555634 CEND1Q8N111 149 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms