RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 SPACA4Q8TDM5 124 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 TMEM101Q96IK0 257 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 BTF3L4Q96K17 158 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 IMMP2LQ96T52 175 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 KIR2DL4Q99706 377 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 TMEM242Q9NWH2 141 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 LAMTOR2Q9Y2Q5 125 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 UBE2D4Q9Y2X8 147 aa2.6□□□□□ -1.99
CPSF2-204ENST00000555244 IGHV3OR16-9A0A0B4J2B5 98 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 SMKR1H3BMG3 65 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 K7EMI3 77 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 OXTP01178 125 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 S100A6P06703 90 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 CKS2P33552 79 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 CXCL6P80162 114 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 IFITM2Q01629 132 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 SS18Q15532 418 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 RNASEKQ6P5S7 137 aaKnown RBP2.59□□□□□ -1.99
CPSF2-204ENST00000555244 UQCC3Q6UW78 93 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 ERASQ7Z444 233 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 LINC00469Q8N7U9 141 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 SMIM2Q9BVW6 85 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 PKIGQ9Y2B9 76 aa2.59□□□□□ -1.99
CPSF2-204ENST00000555244 TRAV9-1A0A075B6T8 112 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 TMEM218A2RU14 115 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 D6R8Y8 96 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 NPYP01303 97 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 MT-ND4LP03901 98 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 FCER1GP30273 86 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 RAB14P61106 215 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 C10orf91Q5T1B1 145 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 TMEM136Q6ZRR5 245 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 ORMDL3Q8N138 153 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 LINC01561Q8N1V8 128 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 SPANXA1Q9NS26 97 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 LINC00474Q9P2X8 69 aa2.58□□□□□ -2
CPSF2-204ENST00000555244 TNXBP22105 4242 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 FAM168BA1KXE4 195 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 LINC01546A6NGU7 62 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 E9PLD3 99 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 COX7A2LO14548 114 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 TLX1NBP0CAT3 122 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 ADCYAP1P18509 176 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 XCL1P47992 114 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 RPL37AP61513 92 aaKnown RBP2.57□□□□□ -2
CPSF2-204ENST00000555244 COX6A2Q02221 97 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 MRPL54Q6P161 138 aaKnown RBP2.57□□□□□ -2
CPSF2-204ENST00000555244 Q6ZRU5 148 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 FAM19A3Q7Z5A8 133 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 SLC7A5P1Q8MH63 180 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 Q8N8P6 123 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 OR10D4PQ8NGN7 298 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 PRELID3AQ96N28 172 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 AMELXQ99217 191 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 SEC11CQ9BY50 192 aa2.57□□□□□ -2
CPSF2-204ENST00000555244 IGLV4-69A0A075B6H9 119 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 IGKV3OR2-268A0A0C4DH90 116 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 IGIPA6NJ69 53 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 APOMO95445 188 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 CHTF8P0CG12 524 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 G0S2P27469 103 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 HNRNPA3P51991 378 aaKnown RBP2.56□□□□□ -2
CPSF2-204ENST00000555244 RPL39P62891 51 aaKnown RBP2.56□□□□□ -2
CPSF2-204ENST00000555244 SYCNQ0VAF6 134 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 KIAA0087Q14695 138 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 Q6ZUT4 128 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 CARD19Q96LW7 228 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 MRPL35Q9NZE8 188 aaKnown RBP2.56□□□□□ -2
CPSF2-204ENST00000555244 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
CPSF2-204ENST00000555244 IGLV8-61A0A075B6I0 122 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 A0A096LNI7 61 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 TRAV13-1A0A0B4J241 112 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 LINC01549A6NIU2 74 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.55□□□□□ -2
CPSF2-204ENST00000555244 MT1HL1P0DM35 61 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 RAB5AP20339 215 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 IFI27P40305 119 aaPredicted RBP2.55□□□□□ -2
CPSF2-204ENST00000555244 UBE2D1P51668 147 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 COX19Q49B96 90 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 ORMDL2Q53FV1 153 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 LINC00173Q6ZV60 143 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 TMEM141Q96I45 108 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 TIMM17AQ99595 171 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 GNB1LQ9BYB4 327 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 MAP1LC3AQ9H492 121 aa2.55□□□□□ -2
CPSF2-204ENST00000555244 NXT2Q9NPJ8 142 aaKnown RBP2.55□□□□□ -2
CPSF2-204ENST00000555244 CARHSP1Q9Y2V2 147 aaKnown RBP2.55□□□□□ -2
CPSF2-204ENST00000555244 LRP2P98164 4655 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 LOC107984640A0A0U1RRK4 108 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 A0A1W2PNN7 141 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 SERF1AO75920 110 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 SEC11AP67812 179 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 PRR3P79522 188 aaKnown RBP2.54□□□□□ -2
CPSF2-204ENST00000555244 RHEBQ15382 184 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 PRR4Q16378 134 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 RNASE13Q5GAN3 156 aaKnown RBP2.54□□□□□ -2
CPSF2-204ENST00000555244 C5orf38Q86SI9 138 aa2.54□□□□□ -2
CPSF2-204ENST00000555244 C7orf33Q8WU49 177 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms