RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 DNAH11Q96DT5 4516 aa10.68□□□□□ -0.7
SPTLC2-203ENST00000554901 CKS1BP61024 79 aa10.67□□□□□ -0.7
SPTLC2-203ENST00000554901 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
SPTLC2-203ENST00000554901 SFTA2Q6UW10 78 aa10.67□□□□□ -0.7
SPTLC2-203ENST00000554901 CARD19Q96LW7 228 aa10.67□□□□□ -0.7
SPTLC2-203ENST00000554901 PKIGQ9Y2B9 76 aa10.66□□□□□ -0.7
SPTLC2-203ENST00000554901 HECTD4Q9Y4D8 3996 aa10.65□□□□□ -0.7
SPTLC2-203ENST00000554901 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
SPTLC2-203ENST00000554901 GCSHP23434 173 aa10.64□□□□□ -0.71
SPTLC2-203ENST00000554901 Q6ZRU5 148 aa10.64□□□□□ -0.71
SPTLC2-203ENST00000554901 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
SPTLC2-203ENST00000554901 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
SPTLC2-203ENST00000554901 E9PLD3 99 aa10.63□□□□□ -0.71
SPTLC2-203ENST00000554901 LEPROTO15243 131 aa10.63□□□□□ -0.71
SPTLC2-203ENST00000554901 C2orf82Q6UX34 121 aa10.63□□□□□ -0.71
SPTLC2-203ENST00000554901 UNQ6190/PRO20217Q6UXQ8 127 aa10.63□□□□□ -0.71
SPTLC2-203ENST00000554901 FUSP35637 526 aaKnown RBP eCLIP10.62□□□□□ -0.71
SPTLC2-203ENST00000554901 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
SPTLC2-203ENST00000554901 SCGB1D1O95968 90 aa10.6□□□□□ -0.71
SPTLC2-203ENST00000554901 C6orf48Q9UBA6 75 aa10.6□□□□□ -0.71
SPTLC2-203ENST00000554901 J3QQQ9 107 aa10.59□□□□□ -0.71
SPTLC2-203ENST00000554901 TLX1NBP0CAT3 122 aa10.59□□□□□ -0.71
SPTLC2-203ENST00000554901 SDIM1Q6ZPB5 146 aa10.59□□□□□ -0.71
SPTLC2-203ENST00000554901 STPG4Q8N801 248 aa10.59□□□□□ -0.71
SPTLC2-203ENST00000554901 ZNF625Q96I27 306 aaPredicted RBP10.59□□□□□ -0.71
SPTLC2-203ENST00000554901 NMUP48645 174 aa10.58□□□□□ -0.72
SPTLC2-203ENST00000554901 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
SPTLC2-203ENST00000554901 LOC107984640A0A0U1RRK4 108 aa10.58□□□□□ -0.72
SPTLC2-203ENST00000554901 HERV-K104P63124 156 aa10.58□□□□□ -0.72
SPTLC2-203ENST00000554901 ATOH7Q8N100 152 aa10.58□□□□□ -0.72
SPTLC2-203ENST00000554901 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
SPTLC2-203ENST00000554901 PKHD1P08F94 4074 aa10.57□□□□□ -0.72
SPTLC2-203ENST00000554901 MYMXA0A1B0GTQ4 84 aa10.57□□□□□ -0.72
SPTLC2-203ENST00000554901 HSBP1L1C9JCN9 74 aa10.57□□□□□ -0.72
SPTLC2-203ENST00000554901 LGALS3P17931 250 aaKnown RBP10.57□□□□□ -0.72
SPTLC2-203ENST00000554901 KRTAP10-1P60331 282 aa10.57□□□□□ -0.72
SPTLC2-203ENST00000554901 LINC01620Q4KN68 170 aa10.57□□□□□ -0.72
SPTLC2-203ENST00000554901 DNAH5Q8TE73 4624 aa10.56□□□□□ -0.72
SPTLC2-203ENST00000554901 LINC00474Q9P2X8 69 aa10.56□□□□□ -0.72
SPTLC2-203ENST00000554901 NDUFC2-KCTD14E9PQ53 114 aa10.55□□□□□ -0.72
SPTLC2-203ENST00000554901 TSPEAR-AS2P59090 65 aa10.55□□□□□ -0.72
SPTLC2-203ENST00000554901 COX17Q14061 63 aa10.55□□□□□ -0.72
SPTLC2-203ENST00000554901 LINC00587B1AMM8 73 aa10.54□□□□□ -0.72
SPTLC2-203ENST00000554901 Q6ZSA8 131 aa10.54□□□□□ -0.72
SPTLC2-203ENST00000554901 ANKRD39Q53RE8 183 aa10.53□□□□□ -0.72
SPTLC2-203ENST00000554901 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
SPTLC2-203ENST00000554901 IGKV2D-26A0A0A0MRZ7 120 aa10.53□□□□□ -0.72
SPTLC2-203ENST00000554901 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
SPTLC2-203ENST00000554901 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
SPTLC2-203ENST00000554901 PTTG1IPP53801 180 aa10.52□□□□□ -0.73
SPTLC2-203ENST00000554901 RPL18AQ02543 176 aaKnown RBP10.52□□□□□ -0.73
SPTLC2-203ENST00000554901 A0A096LNI7 61 aa10.51□□□□□ -0.73
SPTLC2-203ENST00000554901 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
SPTLC2-203ENST00000554901 Q6ZRP5 223 aa10.51□□□□□ -0.73
SPTLC2-203ENST00000554901 EPPK1P58107 5090 aaKnown RBP10.5□□□□□ -0.73
SPTLC2-203ENST00000554901 DYNC1H1Q14204 4646 aaKnown RBP10.5□□□□□ -0.73
SPTLC2-203ENST00000554901 MAJINQ3KP22 176 aa10.5□□□□□ -0.73
SPTLC2-203ENST00000554901 GAGE2BQ13066 116 aa10.49□□□□□ -0.73
SPTLC2-203ENST00000554901 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
SPTLC2-203ENST00000554901 LRP1BQ9NZR2 4599 aa10.49□□□□□ -0.73
SPTLC2-203ENST00000554901 ZNF815PA8K554 130 aa10.48□□□□□ -0.73
SPTLC2-203ENST00000554901 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
SPTLC2-203ENST00000554901 IGKV2-24A0A0C4DH68 120 aa10.48□□□□□ -0.73
SPTLC2-203ENST00000554901 PFN2P35080 140 aa10.48□□□□□ -0.73
SPTLC2-203ENST00000554901 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
SPTLC2-203ENST00000554901 VAMP8Q9BV40 100 aa10.48□□□□□ -0.73
SPTLC2-203ENST00000554901 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
SPTLC2-203ENST00000554901 TSTD3H0UI37 97 aa10.47□□□□□ -0.73
SPTLC2-203ENST00000554901 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
SPTLC2-203ENST00000554901 A0A0J9YXY3 114 aa10.46□□□□□ -0.74
SPTLC2-203ENST00000554901 CHTF8P0CG12 524 aa10.46□□□□□ -0.74
SPTLC2-203ENST00000554901 LINC00158P58513 81 aa10.46□□□□□ -0.74
SPTLC2-203ENST00000554901 GAGE2EQ4V326 116 aa10.46□□□□□ -0.74
SPTLC2-203ENST00000554901 GAGE2DQ9UEU5 116 aa10.46□□□□□ -0.74
SPTLC2-203ENST00000554901 PANO1I0J062 215 aa10.45□□□□□ -0.74
SPTLC2-203ENST00000554901 TIMM17BO60830 172 aa10.44□□□□□ -0.74
SPTLC2-203ENST00000554901 SMIM13P0DJ93 91 aa10.44□□□□□ -0.74
SPTLC2-203ENST00000554901 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
SPTLC2-203ENST00000554901 DPH3Q96FX2 82 aa10.44□□□□□ -0.74
SPTLC2-203ENST00000554901 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
SPTLC2-203ENST00000554901 PLAC8Q9NZF1 115 aa10.43□□□□□ -0.74
SPTLC2-203ENST00000554901 A0A087WYN8 130 aa10.43□□□□□ -0.74
SPTLC2-203ENST00000554901 EPM2AB3EWF7 344 aa10.43□□□□□ -0.74
SPTLC2-203ENST00000554901 SPATA45Q537H7 98 aa10.43□□□□□ -0.74
SPTLC2-203ENST00000554901 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
SPTLC2-203ENST00000554901 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
SPTLC2-203ENST00000554901 PAM16Q9Y3D7 125 aa10.43□□□□□ -0.74
SPTLC2-203ENST00000554901 XGP55808 180 aa10.42□□□□□ -0.74
SPTLC2-203ENST00000554901 LBHQ53QV2 105 aaPredicted RBP10.42□□□□□ -0.74
SPTLC2-203ENST00000554901 SCGB1D4Q6XE38 83 aa10.42□□□□□ -0.74
SPTLC2-203ENST00000554901 SCXQ7RTU7 201 aa10.42□□□□□ -0.74
SPTLC2-203ENST00000554901 CIRBP-AS1Q8TBR5 109 aa10.42□□□□□ -0.74
SPTLC2-203ENST00000554901 XAGE1AQ9HD64 81 aa10.42□□□□□ -0.74
SPTLC2-203ENST00000554901 DNAH8Q96JB1 4490 aa10.41□□□□□ -0.74
SPTLC2-203ENST00000554901 COX8AP10176 69 aa10.41□□□□□ -0.74
SPTLC2-203ENST00000554901 MIR7-3HGQ8N6C7 128 aa10.41□□□□□ -0.74
SPTLC2-203ENST00000554901 PLA2G2DQ9UNK4 145 aa10.41□□□□□ -0.74
SPTLC2-203ENST00000554901 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
SPTLC2-203ENST00000554901 DLEU1O43261 78 aa10.4□□□□□ -0.74
SPTLC2-203ENST00000554901 BOD1L2Q8IYS8 172 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms