RNA–Protein interactions for RNA: ENST00000554628.5

PTPN21-206, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 1,571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-206ENST00000554628 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
PTPN21-206ENST00000554628 A0A096LNI7 61 aa11.57□□□□□ -0.56
PTPN21-206ENST00000554628 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
PTPN21-206ENST00000554628 H0Y8G0 127 aa11.57□□□□□ -0.56
PTPN21-206ENST00000554628 SMR3BP02814 79 aaPredicted RBP11.57□□□□□ -0.56
PTPN21-206ENST00000554628 RNF151Q2KHN1 245 aa11.57□□□□□ -0.56
PTPN21-206ENST00000554628 C6orf48Q9UBA6 75 aa11.57□□□□□ -0.56
PTPN21-206ENST00000554628 F8VRH5 84 aa11.56□□□□□ -0.56
PTPN21-206ENST00000554628 COA6Q5JTJ3 125 aaKnown RBP11.56□□□□□ -0.56
PTPN21-206ENST00000554628 SPACA4Q8TDM5 124 aa11.56□□□□□ -0.56
PTPN21-206ENST00000554628 LOC107984640A0A0U1RRK4 108 aa11.55□□□□□ -0.56
PTPN21-206ENST00000554628 CKS1BP61024 79 aa11.55□□□□□ -0.56
PTPN21-206ENST00000554628 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
PTPN21-206ENST00000554628 Q8N1X5 172 aa11.55□□□□□ -0.56
PTPN21-206ENST00000554628 PKIGQ9Y2B9 76 aa11.55□□□□□ -0.56
PTPN21-206ENST00000554628 ODF1Q14990 250 aa11.54□□□□□ -0.56
PTPN21-206ENST00000554628 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
PTPN21-206ENST00000554628 DPH3Q96FX2 82 aa11.54□□□□□ -0.56
PTPN21-206ENST00000554628 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
PTPN21-206ENST00000554628 GAGE2BQ13066 116 aa11.53□□□□□ -0.56
PTPN21-206ENST00000554628 MAJINQ3KP22 176 aa11.53□□□□□ -0.56
PTPN21-206ENST00000554628 A0A087WYN8 130 aa11.52□□□□□ -0.57
PTPN21-206ENST00000554628 IGLV5-39A0A0G2JS06 123 aa11.52□□□□□ -0.57
PTPN21-206ENST00000554628 PTTG1IPP53801 180 aa11.52□□□□□ -0.57
PTPN21-206ENST00000554628 RPL18AQ02543 176 aaKnown RBP11.52□□□□□ -0.57
PTPN21-206ENST00000554628 CXCL5P42830 114 aa11.51□□□□□ -0.57
PTPN21-206ENST00000554628 C9orf116Q5BN46 136 aaPredicted RBP11.51□□□□□ -0.57
PTPN21-206ENST00000554628 MAP1LC3CQ9BXW4 147 aa11.51□□□□□ -0.57
PTPN21-206ENST00000554628 LINC00474Q9P2X8 69 aa11.51□□□□□ -0.57
PTPN21-206ENST00000554628 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
PTPN21-206ENST00000554628 KRTAP4-5Q9BYR2 181 aa11.5□□□□□ -0.57
PTPN21-206ENST00000554628 STPG4Q8N801 248 aa11.5□□□□□ -0.57
PTPN21-206ENST00000554628 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
PTPN21-206ENST00000554628 Q6ZRP5 223 aa11.49□□□□□ -0.57
PTPN21-206ENST00000554628 PMCHL2Q9BQD1 86 aa11.49□□□□□ -0.57
PTPN21-206ENST00000554628 PLAC8Q9NZF1 115 aa11.49□□□□□ -0.57
PTPN21-206ENST00000554628 EPM2AB3EWF7 344 aa11.47□□□□□ -0.57
PTPN21-206ENST00000554628 Q5VSD8 79 aa11.47□□□□□ -0.57
PTPN21-206ENST00000554628 LINC00528Q8N1L1 170 aa11.47□□□□□ -0.57
PTPN21-206ENST00000554628 NDUFC2-KCTD14E9PQ53 114 aa11.46□□□□□ -0.57
PTPN21-206ENST00000554628 SYS1-DBNDD2H3BUS1 97 aa11.46□□□□□ -0.57
PTPN21-206ENST00000554628 PLNP26678 52 aa11.46□□□□□ -0.57
PTPN21-206ENST00000554628 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
PTPN21-206ENST00000554628 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
PTPN21-206ENST00000554628 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
PTPN21-206ENST00000554628 FAT1Q14517 4588 aa11.45□□□□□ -0.58
PTPN21-206ENST00000554628 DPM2O94777 84 aa11.45□□□□□ -0.58
PTPN21-206ENST00000554628 IGKCP01834 107 aa11.44□□□□□ -0.58
PTPN21-206ENST00000554628 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
PTPN21-206ENST00000554628 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
PTPN21-206ENST00000554628 LINC01545Q5VT33 79 aa11.41□□□□□ -0.58
PTPN21-206ENST00000554628 PET117Q6UWS5 81 aa11.41□□□□□ -0.58
PTPN21-206ENST00000554628 S100A6P06703 90 aa11.4□□□□□ -0.58
PTPN21-206ENST00000554628 KRTDAPP60985 99 aa11.4□□□□□ -0.58
PTPN21-206ENST00000554628 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
PTPN21-206ENST00000554628 FAM168BA1KXE4 195 aa11.39□□□□□ -0.59
PTPN21-206ENST00000554628 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
PTPN21-206ENST00000554628 HIST3H2BBQ8N257 126 aa11.39□□□□□ -0.59
PTPN21-206ENST00000554628 PLA2G1BP04054 148 aaKnown RBP11.38□□□□□ -0.59
PTPN21-206ENST00000554628 SFTA2Q6UW10 78 aa11.38□□□□□ -0.59
PTPN21-206ENST00000554628 XAGE1AQ9HD64 81 aa11.37□□□□□ -0.59
PTPN21-206ENST00000554628 PFN2P35080 140 aa11.37□□□□□ -0.59
PTPN21-206ENST00000554628 ERG28Q9UKR5 140 aa11.37□□□□□ -0.59
PTPN21-206ENST00000554628 LEPROTO15243 131 aa11.36□□□□□ -0.59
PTPN21-206ENST00000554628 S100A2P29034 98 aa11.36□□□□□ -0.59
PTPN21-206ENST00000554628 RPL37AP61513 92 aaKnown RBP11.36□□□□□ -0.59
PTPN21-206ENST00000554628 HERVK_113P61574 105 aa11.36□□□□□ -0.59
PTPN21-206ENST00000554628 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
PTPN21-206ENST00000554628 C7orf33Q8WU49 177 aa11.36□□□□□ -0.59
PTPN21-206ENST00000554628 TSPEAR-AS2P59090 65 aa11.35□□□□□ -0.59
PTPN21-206ENST00000554628 KRTAP10-4P60372 401 aaPredicted RBP11.35□□□□□ -0.59
PTPN21-206ENST00000554628 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
PTPN21-206ENST00000554628 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
PTPN21-206ENST00000554628 SNRPEP62304 92 aaKnown RBP11.34□□□□□ -0.59
PTPN21-206ENST00000554628 PLEKHB2Q96CS7 222 aa11.34□□□□□ -0.59
PTPN21-206ENST00000554628 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
PTPN21-206ENST00000554628 COX17Q14061 63 aa11.33□□□□□ -0.6
PTPN21-206ENST00000554628 NDUFA12Q9UI09 145 aa11.33□□□□□ -0.6
PTPN21-206ENST00000554628 SRRM2Q9UQ35 2752 aaKnown RBP11.33□□□□□ -0.6
PTPN21-206ENST00000554628 ABCA13Q86UQ4 5058 aa11.33□□□□□ -0.6
PTPN21-206ENST00000554628 J3QQQ9 107 aa11.33□□□□□ -0.6
PTPN21-206ENST00000554628 PHF5AQ7RTV0 110 aaKnown RBP11.33□□□□□ -0.6
PTPN21-206ENST00000554628 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
PTPN21-206ENST00000554628 E9PLD3 99 aa11.32□□□□□ -0.6
PTPN21-206ENST00000554628 TMA7Q9Y2S6 64 aaKnown RBP11.32□□□□□ -0.6
PTPN21-206ENST00000554628 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
PTPN21-206ENST00000554628 C20orf202A1L168 122 aa11.31□□□□□ -0.6
PTPN21-206ENST00000554628 HERV-K104P63124 156 aa11.31□□□□□ -0.6
PTPN21-206ENST00000554628 SERTAD4-AS1Q5TG53 156 aa11.31□□□□□ -0.6
PTPN21-206ENST00000554628 C5orf52A6NGY3 159 aa11.3□□□□□ -0.6
PTPN21-206ENST00000554628 A0A0U1RRA0 63 aa11.29□□□□□ -0.6
PTPN21-206ENST00000554628 M0QXV9 152 aa11.29□□□□□ -0.6
PTPN21-206ENST00000554628 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
PTPN21-206ENST00000554628 LGALS3P17931 250 aaKnown RBP11.29□□□□□ -0.6
PTPN21-206ENST00000554628 LINC00158P58513 81 aa11.28□□□□□ -0.6
PTPN21-206ENST00000554628 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
PTPN21-206ENST00000554628 SND1-IT1Q9HBX3 110 aa11.28□□□□□ -0.6
PTPN21-206ENST00000554628 SMIM13P0DJ93 91 aa11.28□□□□□ -0.6
PTPN21-206ENST00000554628 NMUP48645 174 aa11.27□□□□□ -0.61
PTPN21-206ENST00000554628 ATOH7Q8N100 152 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms